ZMP
thraa
Ensembl ID:
ZFIN ID:
Description:
Thyroid hormone receptor alpha-A [Source:UniProtKB/Swiss-Prot;Acc:Q98867]
Human Orthologue:
THRA
Human Description:
thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) [S
Mouse Orthologue:
Thra
Mouse Description:
thyroid hormone receptor alpha Gene [Source:MGI Symbol;Acc:MGI:98742]
Alleles
There are 3 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa31342 | Essential Splice Site | Available for shipment | Available now |
sa25254 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa31341 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa31342
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000160 | Essential Splice Site | 78 | 427 | 4 | 10 |
ENSDART00000112817 | Essential Splice Site | 72 | 466 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 34799503)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 34584699 |
GRCz11 | 3 | 34714207 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAAGGCCACTGGCTATCATTACCGCTGCATCACATGTGAGGGCTGCAAG[G/A]TGAGACTTCCAGCGTCTGAAGCGCTTGACTCGTGATAAATCTGTATTTAA
Long Flanking Sequence:
TTATTATTATTAGAAAATGCTTTTATTCTTGCCGAAATAAAACAAAAAGACTTTCACCAGAAGAATAAATATTATCAGATATACTGTGAAAATTTTCTTGCTCTGTTAAACATCATTTGGCAAATATTTACAAAATAAAAGGGGGGCTAATAATTCTGACTTCAACTGTATATCACCATTCTCTTTTTGTCAGATGGCCAAATGGAGTGAAGAGGAAAAGAAAGAATAGTCAATGCTCTATGAACAGCACATCCGGTAAGAATCTGGTGTCACTGCAGTCAAAACCCTAAATATGATGGGCTTATGATGCCCAGGGATGTAGAGGTTGGTGTGTGTTTGTTTTCTGCTGCAGTCGCCTATTCTCTCCTCATCTTTTAGACAAGAGCATCTCTGTTCCTGGGTACGTTCCCAGTTATCTGGAGAAAGATGAGCCGTGTGTGGTGTGCGGAGACAAGGCCACTGGCTATCATTACCGCTGCATCACATGTGAGGGCTGCAAG[G/A]TGAGACTTCCAGCGTCTGAAGCGCTTGACTCGTGATAAATCTGTATTTAATCATTAAGCTGCTTTCTTCTGTCTGCACTGTACACAGGGTTTCTTCAGGAGGACAATACAGAAAAACCTTCATCCGTCCTATTCCTGTAAATATGACAGCTGCTGCATCATTGACAAAATCACCCGCAACCAGTGCCAGCTGTGCCGCTTCAGGAAGTGCATCTCAGTGGGCATGGCCATGGACTGTGAGTGTCCACACAAACAAACTATGTACTTATTATTTTGTTTGATGATTTTTTAAGTGTGTACGCCTTTTGTAAAGCTGCTTTGAAACATTAATTATTGTGAAAAGTGCTACACAAATATGTAAATAAGTAAAGGTTTATTTATGTACAGTGCATCCGGAAAGTATTCATAGCACTTCACTTTTTTCACATTTGTTTATGTTACAGCCTTATTCCAAAATAGATTAAATTCATTAATTTCCTCAAAATGCTACACACAACACCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25254
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000160 | Nonsense | 97 | 427 | 5 | 10 |
ENSDART00000112817 | Nonsense | 91 | 466 | 4 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 34799359)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 34584555 |
GRCz11 | 3 | 34714063 |
KASP Assay ID:
554-7658.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGGAGGACAATACAGAAAAACCTTCATCCGTCCTATTCCTGTAAATA[T/G]GACAGCTGCTGCATCATTGACAAAATCACCCGCAACCAGTGCCAGCTGTG
Long Flanking Sequence:
GGCTAATAATTCTGACTTCAACTGTATATCACCATTCTCTTTTTGTCAGATGGCCAAATGGAGTGAAGAGGAAAAGAAAGAATAGTCAATGCTCTATGAACAGCACATCCGGTAAGAATCTGGTGTCACTGCAGTCAAAACCCTAAATATGATGGGCTTATGATGCCCAGGGATGTAGAGGTTGGTGTGTGTTTGTTTTCTGCTGCAGTCGCCTATTCTCTCCTCATCTTTTAGACAAGAGCATCTCTGTTCCTGGGTACGTTCCCAGTTATCTGGAGAAAGATGAGCCGTGTGTGGTGTGCGGAGACAAGGCCACTGGCTATCATTACCGCTGCATCACATGTGAGGGCTGCAAGGTGAGACTTCCAGCGTCTGAAGCGCTTGACTCGTGATAAATCTGTATTTAATCATTAAGCTGCTTTCTTCTGTCTGCACTGTACACAGGGTTTCTTCAGGAGGACAATACAGAAAAACCTTCATCCGTCCTATTCCTGTAAATA[T/G]GACAGCTGCTGCATCATTGACAAAATCACCCGCAACCAGTGCCAGCTGTGCCGCTTCAGGAAGTGCATCTCAGTGGGCATGGCCATGGACTGTGAGTGTCCACACAAACAAACTATGTACTTATTATTTTGTTTGATGATTTTTTAAGTGTGTACGCCTTTTGTAAAGCTGCTTTGAAACATTAATTATTGTGAAAAGTGCTACACAAATATGTAAATAAGTAAAGGTTTATTTATGTACAGTGCATCCGGAAAGTATTCATAGCACTTCACTTTTTTCACATTTGTTTATGTTACAGCCTTATTCCAAAATAGATTAAATTCATTAATTTCCTCAAAATGCTACACACAACACCTCATAATAACAATGTGAAAAAAAAAACTTTTTTTTTTAATTGTTGCAAATGTATTAAAAATAAGAAACCTGAAAAAAAAACTGTTGATGCCCTTTTTCAGCAATTACAGACTCAAGTCTTTTTAAATATGATGCTTCAAGCTTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31341
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000000160 | Nonsense | 367 | 427 | 9 | 10 |
ENSDART00000112817 | Nonsense | 361 | 466 | 8 | 11 |
Genomic Location (Zv9):
Chromosome 3 (position 34786727)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 3 | 34571923 |
GRCz11 | 3 | 34701431 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTCGAGCACTACATCAACCACCGCAAGCACAACATCTCCCACTTCTG[G/A]CCCAAGCTGCTGATGAAGGTGACGAACCTGCGCATGATCGGCGCCTGCCA
Long Flanking Sequence:
GAGTACCGAATCTTCTCCATTCTAAGATGGTACATAATCCACTGATTACAAGTTGGAAGAAATTTGTCCTTCCATTTTAGCAGTATAATAAGTCTAGCAATTAATGTTGAAAAAGAAATCATACTTTAGGTATTATTGTTTAATTTGGGATCTGTAATTAAATCAAATATTCCGACAATAGGGCAAGGGTCAATTGATGCATGCTAGATATTTGAAAAGAAATTAAATAGAATAATAAATGTATTTAATAAAGAAAATTCCAAACACATCTTTAAAATCTACATTACGTGTTATAAAATCATGTGTTTTAAAGAATGATTTAAAGATCATCCTTAAAGACTTGGCTTGAATTCGCTGTAGTTTTACAATCTTTATGTAATCCACCACACAGATCGCTCTGGACTGACATGTGTGGAGAAGATCGAGAAGTGTCAGGAGATGTACCTGTTGGCATTCGAGCACTACATCAACCACCGCAAGCACAACATCTCCCACTTCTG[G/A]CCCAAGCTGCTGATGAAGGTGACGAACCTGCGCATGATCGGCGCCTGCCACGCCAGCCGCTTCCTGCACATGAAGGTGGAGTGTCCAACAGAACTGTTCCCGCCGCTCTTCCTGGAGGTCTTCGAGGATCAGGAGGTGTGACCCAGAGACACAGCGGCAAAACAAACTCCACCTCATTTTGTTTTCTCGCAAAGCATACCAGAAGCGTTTTTTGTTTCTCACAAGCTCGTGCGCTCTCGAAACGGGACATGTACTTTATTTTGCATCGTCGGTCCCTCGTCTGCTTTTGTCTGGGATTTGTTTCCGGGTTGTCAGCCTCCACACGTTTCGACCCTGCCATTCAGATATTCCTCTCACAGACGGACAAAAGCTAGCATGCATCAACCTACCTCTCATACAAACATACCTCCCAATCTCAGAAGGAGCTTATTTTTAAAAGCGTGACAAAATAAAACAAAAAAAAGCGCCACATTTTTCAATAGCGGTTTCGGAAACGCTAG
Associated Phenotype:
Not determined