ZMP
nkx6.1
Ensembl ID:
ZFIN ID:
Description:
homeobox protein Nkx-6.1 [Source:RefSeq peptide;Acc:NP_001002475]
Human Orthologue:
NKX6-1
Human Description:
NK6 homeobox 1 [Source:HGNC Symbol;Acc:7839]
Mouse Orthologue:
Nkx6-1
Mouse Description:
NK6 homeobox 1 Gene [Source:MGI Symbol;Acc:MGI:1206039]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa3108 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa3108
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000029874 | Essential Splice Site | 231 | 312 | 2 | 3 |
| ENSDART00000123309 | Essential Splice Site | 231 | 311 | 2 | 5 |
Genomic Location (Zv9):
Chromosome 21 (position 17887185)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 21 | 19035437 |
| GRCz11 | 21 | 19072073 |
KASP Assay ID:
554-2486.1 (used for ordering genotyping assays)
KASP Sequence:
AAAGAGCCCGACTAGCCTACTCTTTAGGAATGACAGAGAGTCAAGTCAAG[G/A]TAAGACACCCAATAGTTTATGACGAAGGAACGAGGAAAWCTATCTATCTA
Long Flanking Sequence:
CCCGCAGGAATCTTGTCTGGACTGCCCCGTTTCAGCAGCCTGAGTCCCCCACCGCCTCCAGGGCTTTATTTCAGCCCTAGTGCCGCGGCTGTAGCGGTGGCTCGCTATCCCAAACCCCTGACAGAGCTTCCCGGCAGAACCCCGATATTCTGGCCTGGAGTTATGCAAAGCCCACACTGGAGAGATGCCAGATTTGCGTGCTCACCACGTAAGTGCACTTTTTGTTGTAGCGTCTGAATGATAACTTATTAACAATAATAACAAACATAATCACCATTAAAGGATGCGAAAATATCATTAGCTAATTTGGATTGTCTTCCTTTACAGATCAAAACTCAGTTCTGCTCGACAAAGATGGGAAAAGGAAACACACGCGACCGACGTTTTCCGGGCAGCAAATTTTTGCACTGGAAAAAACATTTGAGCAAACGAAATATTTAGCCGGCCCTGAAAGAGCCCGACTAGCCTACTCTTTAGGAATGACAGAGAGTCAAGTCAAG[G/A]TAAGACACCCAATAGTTTATGACGAAGGAACGAGGAAATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCATACAAGTCAGAGAATTCGGGGGATGATGGAGGATGATGCATGGGAGGGTCGGCATAATATGTTTCTTCAACAGTTTGCAATGCTTTAATTTATGACTTTTATTTACTAATTTATTTTCTATATCATTGTTGGCTATTTACAGGAGCAGTCTCGTTTTAATGTTCAATTACAGACTATTGTATTTAGCCTATTTCACGCGTTAAAATAATTTAAAATGAATGAATAAATGAAAATGCAATATGCTCTTTTGCAAATATTTATTACAATTATTGCAATAATAGGCTATAGATCTGAAAACCTCTTAACCCTGCTCGTATTTTTTCTGTAAATATGTTTAATGTAATTCCCTGTTTTTTCCTTGAA
Associated Phenotype:
Not determined