ZMP

ptpreb

Ensembl ID:

ENSDARG00000021151

ZFIN ID:

ZDB-GENE-060503-263

Description:

protein tyrosine phosphatase, receptor type, E, b [Source:RefSeq peptide;Acc:NP_001038642]

Human Orthologue:

PTPRE

Human Description:

protein tyrosine phosphatase, receptor type, E [Source:HGNC Symbol;Acc:9669]

Mouse Orthologue:

Ptpre

Mouse Description:

protein tyrosine phosphatase, receptor type, E Gene [Source:MGI Symbol;Acc:MGI:97813]

Alleles

There are 3 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa31012	Essential Splice Site	Mutation detected in F1 DNA	Not yet available
sa36441	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa31012

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > G

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000009276	Essential Splice Site	372	686	11	19
ENSDART00000123027	None	None	89	None	6
ENSDART00000143444	Essential Splice Site	363	677	13	21

Genomic Location (Zv9):

Chromosome 17 (position 29398323)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	29322250
GRCz11	17	29339213

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

CTTTGTGTCCAGAATCAGAAAGCAGCGCTGTCAGCTCATTCAGACAGATG[T/G]AAATGACTTTCCGCAGTCCCACTGTTGTATTTGACTCATCATTTCAGCAA

Long Flanking Sequence:

TGCAGAAATAACCACCAACGCAGATGTCTTGAGGCTCAGCTGTTAAACAGCCTCCGCATGTGGGATTGTTAGCACCTCAGCCAGAACAACAGACTTTCTGATTTGCTACAGTGTGAAAAGCCCCTTACCGCAGTGAAACACAAACTGCAACTTCTCTACAGTAGGTGCACTACACAGTTCAATATAAATATTAAATAAATGCCATGTTTAATTGAACAAAAAAAAAATATATATAATCATTTTTCCTAAAATAGCCATTCAAATGGAAAGACCCTGCAGTTTTGAGTACATGATCTCATTATCCCACATTTCATGCCCTACTTATACACGGCTGATCTCACCGCTTATTTCCTGTCTGTGTAGCGCTGGGGTTGGCAGGACCGGTACCTTCATTGTGATTGACGCCATGATGGATATGATGCACGCTGAGGGCAGGTTGGACGTGTTCGGCTTTGTGTCCAGAATCAGAAAGCAGCGCTGTCAGCTCATTCAGACAGATG[T/G]AAATGACTTTCCGCAGTCCCACTGTTGTATTTGACTCATCATTTCAGCAAAGACAAGCCACTAATATTCCCTTTTCCCGCCCACAGATGCAGTATTCATTCATTTACCAGGCACTTTTGGAGCATTACCTGTTTGGGGACACTGAGTTAGACATCGCTTCCCTGGAGGGTCACCTTCATAAACTCCACAACACGCACACAAACATGGACCGCGTGGGCCTGGAGGAAGAGTTCAGAGTAAGACAAACATTAGTTTATACAGCTTAAGGGCAAACATGAGTCAGTACGAACACACACAGTGGCAAACGGGAACTGCTTTGTTTTCTTTTATGTCATGTTGTTTTGTTTGGAACCTCCTCAGAAACTGACTAATGTTCGCATCATGAAGGAGAACATGAGAACCGGAAATCTGCCCGCCAACATGAGAAAGAACAGAGTTCTGCAGATCATCCCATGTGAGAAGATACAGATTTCCAGATTTAGCATTTGTAAACGTTACTC

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa36441

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000009276	Nonsense	472	686	14	19
ENSDART00000123027	None	None	89	None	6
ENSDART00000143444	Nonsense	463	677	16	21

Genomic Location (Zv9):

Chromosome 17 (position 29399774)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	17	29323701
GRCz11	17	29340664

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TTCAACAGGGTAATATTATCAATGAAGAGAGGCCAAGAATTCACAGACTA[C/A]ATTAATGCATCTTTCATAGATGTAAGTATTCTTCACAAATATTTGTATTA

Long Flanking Sequence:

CTTTTGTTTTCTGGCACTCTGTTCATTTCCTCTTCCTTTTCTTGCGCTTTATTTAGTTTTCTTTCTCATTCTTTCTTTCTTACTTTTCTATTTTTTGTCATCTTTTTTCTTCTTTTCTCTGTCTATCCTTTCTCTTTTTCTGTCACTGTTTTCATTTTGTCTTCATTTATTGTTTTTTCTTTCTTGGTCTTTCTTTCTTATCTTGTTGTTCTTTCTCAATTCGTTCGATCCTTTCCCTTTTGTTTTCTGGCACTCTCTTCATTTTGTCTTCCTTTATTTCTCTTTCCTTAGTTATCTTTCCCATTCTTTCTGCCTTTCTTATCTTGTCTGTTTTTTTTTGGGGTTTTTTTTGGTTTCTGACACTTTCCATATTTTCATTTTTCTCTCATTTCCTTTCTTTGATCCATTCTTTCAAAATCTAATCATTATCTTGTCTTATTACTAGATGACTTCAACAGGGTAATATTATCAATGAAGAGAGGCCAAGAATTCACAGACTA[C/A]ATTAATGCATCTTTCATAGATGTAAGTATTCTTCACAAATATTTGTATTAATAAAAATAATAATAATAATAATAAAATTATTATTATTAATATTAATATTACCATTATTAGTCAACATGTCAACTTACAAATTCTTTACCTTTGTAGGGTTACAGGCAGAAGGATTACTTTATTGCAACTCAGGCACCTTTGGCCCACACTGTGCAGGACTTCTGGCGTATGGTTTGGGAGTGGAAGTGCCACTCTATCGTCGTGCTGACTGAGCTAAAAGAAAGAGAACAGGTACCGTTTAACGGTTTATATTTAGTTACATTTCACATTCACAGTTTAACGTCTGGCACATTACCATTTTCAACAACTTTCCCTCCAGGAGAAGTGTGTGCGTTACTGGCCAGCAGAGGGCAGTGTTTCGTTCGGAGATTATGTACTGGAGCTGAAAAGAGACACACTTTGCGAGACTTTCAGTATTCGGGACATGCTGCTGTCATATGCATCAGTGA

Associated Phenotype:

Not determined