ZMP
brd9
Ensembl ID:
ZFIN ID:
Description:
Bromodomain-containing protein 9 [Source:UniProtKB/Swiss-Prot;Acc:Q7ZUF2]
Human Orthologue:
BRD9
Human Description:
bromodomain containing 9 [Source:HGNC Symbol;Acc:25818]
Mouse Orthologue:
Brd9
Mouse Description:
bromodomain containing 9 Gene [Source:MGI Symbol;Acc:MGI:2145317]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42832 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa36267 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa31009 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa42832
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000009256 | Nonsense | 98 | 631 | 3 | 17 |
Genomic Location (Zv9):
Chromosome 16 (position 56487787)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 53073744 |
| GRCz11 | 16 | 52961518 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GACAAATTTTTGCATATTTCATTCAGGAGGAGAAAAAGAAGAAGCGTGAG[C/T]GAGAGCAGTCAGAAACTGCGTCCACTGCACCAGTGGAGCCGTTCACCCTG
Long Flanking Sequence:
AATTTGGTTTTGTAGCTATTTTAGACAATTACATTTGCTTTGATATTTTATGTGTGTGTGTGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATATCAAAGCAAATGTAATTGTATATATTGTAATTATAATTATATAATTATATATTATTATATATTATTATAATTATATACACAATTATATATAATTGTGTAATTATATATATATATATATATATATATATAAATGTATATTTTCTCATATTTTATATCACATATAACACAGCTACAAAAGACATTGAAACGAAATATTCAGAATACTAAAAAAAATCTACAATAATTACTAAATAGCATTGGATTGCACTATAAAACAAAGTTTTTCTAGAAAACGTGACAAAGTAATCAAGTTAGCTGCATTTTATTTGACAAATTTTTGCATATTTCATTCAGGAGGAGAAAAAGAAGAAGCGTGAG[C/T]GAGAGCAGTCAGAAACTGCGTCCACTGCACCAGTGGAGCCGTTCACCCTGCCCAAACCTGTGGAGGTAAAGCTACTGAAAGCCTGCTACATTATCCAGAGCTGAGCAGTGTGCTAAACTAAAGGAATGATGTGTTTAACAGGTGGTTGTAGAAGAAAAGAAGAGGAAGAGGGACAAGTTTGAATCTGAATCAGAGGCAGATGAGTTTCATCCTGCAGTGAAAGTAGAAGTAGAGCAGCCGGCGGACCGGCCCGTACGAGCCTGCAGAACACAGCAAGGTACAAGTGCAGATCCAAATTATTACAATGGTTGAAGTCAGGATTAGTAGCCCTGCTGAATTCTTAACCACCCTGTATATATTTTTCCCAATTTTTGTTTTACCTCTTAAGGCGCAGGGTGTTTTTTACATGCATTTTGTATTTCTCTTTGCTATTTGGGGTTATTGTAACCTAATTAGAATAAAACCTCAGTATCATCTTTTGATATGATGTGCTTTTAGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa36267
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000009256 | Essential Splice Site | 164 | 631 | 4 | 17 |
Genomic Location (Zv9):
Chromosome 16 (position 56487509)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 53073466 |
| GRCz11 | 16 | 52961240 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTAGAGCAGCCGGCGGACCGGCCCGTACGAGCCTGCAGAACACAGCAAG[G/A]TACAAGTGCAGATCCAAATTATTACAATGGTTGAAGTCAGGATTAGTAGC
Long Flanking Sequence:
TATTTTCTCATATTTTATATCACATATAACACAGCTACAAAAGACATTGAAACGAAATATTCAGAATACTAAAAAAAATCTACAATAATTACTAAATAGCATTGGATTGCACTATAAAACAAAGTTTTTCTAGAAAACGTGACAAAGTAATCAAGTTAGCTGCATTTTATTTGACAAATTTTTGCATATTTCATTCAGGAGGAGAAAAAGAAGAAGCGTGAGCGAGAGCAGTCAGAAACTGCGTCCACTGCACCAGTGGAGCCGTTCACCCTGCCCAAACCTGTGGAGGTAAAGCTACTGAAAGCCTGCTACATTATCCAGAGCTGAGCAGTGTGCTAAACTAAAGGAATGATGTGTTTAACAGGTGGTTGTAGAAGAAAAGAAGAGGAAGAGGGACAAGTTTGAATCTGAATCAGAGGCAGATGAGTTTCATCCTGCAGTGAAAGTAGAAGTAGAGCAGCCGGCGGACCGGCCCGTACGAGCCTGCAGAACACAGCAAG[G/A]TACAAGTGCAGATCCAAATTATTACAATGGTTGAAGTCAGGATTAGTAGCCCTGCTGAATTCTTAACCACCCTGTATATATTTTTCCCAATTTTTGTTTTACCTCTTAAGGCGCAGGGTGTTTTTTACATGCATTTTGTATTTCTCTTTGCTATTTGGGGTTATTGTAACCTAATTAGAATAAAACCTCAGTATCATCTTTTGATATGATGTGCTTTTAGAGAAAAATGATGTCCATATATGTGGACTCGTGGTCCCAATTTACACAAAACACTTTTTCCTGAATGTTTTTTAATGCATATATAACATTAGAAAAAATTTTATAGCTTGCTTTGACTATCAGAGAGTAAACAAACATAATTTTTTCTCCATTTTGAACAGTTAAAAATAGGGTTTTGGGACGTTTCATATGCTGTAAAACAGTTCCAGGGTGACACTGTATGGGCCCTATTTTGACAGTCCATGCGCAAAACGCAGGGCGCAAACGCTTTCAGGGCGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31009
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000009256 | Essential Splice Site | 232 | 631 | 6 | 17 |
Genomic Location (Zv9):
Chromosome 16 (position 56482754)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 53068711 |
| GRCz11 | 16 | 52956485 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAAGGACAAAATCGCTGCAAACGAATACAAAACGATTACAGAATTCAAGG[T/G]TTGTGCATTATTTTATCCTCATTTAGCATCATTCTGTGCAAATGACAGTT
Long Flanking Sequence:
GAGGCGACAGCACTACCTACTGTGCCACTGCTTCGCCCTCGTATATAAACATTATATACTAAATTAGTATACAGTGTTTAAATCTGTTATGAGAGTTAAAAGACATTCTCAGTCCAGTTATAAATGAAGCACCACTTTTGTAAACATCAAAATAAATCCTCACTGGCTTTCAAAGTGTATTTTCTTATTGTTTGCTCCTCTGTCTGTTGTTCTTTCCTAGAAAATGAAGCCACTCCTCGTCAGCAGCTCTTGGAGCATTTCTTGCGTTTGCTTCAGAGGTGAGAAGCTGCACAAACAGACTCGACATCTAATCTTTAAATATCTGCATCATGCATCATTTTTGTGTCTCTACAGAAAAGATGCGCACGGATTCTTCGCCTTTCCTGTAACAGATGCCATTGCTCCGGGATACTCCATGATAATCAAACATCCCATGGACTTCAGCACAATGAAGGACAAAATCGCTGCAAACGAATACAAAACGATTACAGAATTCAAGG[T/G]TTGTGCATTATTTTATCCTCATTTAGCATCATTCTGTGCAAATGACAGTTTTAGGTTTCATTGATTACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATAATACAAAATAAAACAAACTTAAAACATGCAACTAAGAAATGGATGGTAGATACACCGGAAAAGGTCTCCACATTTTTTTAAAAGTCCTTGATGATCCTCTCCACAAGGTCTCCTTTCCACTGCACATGACAAACGACAAGCGACAGACCAGAAGTCATTCATTTCCAATGGAGAGCAGTGCGGGAGCTGCGTGGAGTTCTGATCATCTCCGTATGCGGAAAATTCTGATCCGATTTGAGCTGCTGATCCGTTTAAATATTTGAACTCCTGCGACTAGACCGTATGCGACCGGCCAATCGGATGTGATGTATTCTAGTGTTGTCCAAGCAGGTCCATGTGCGCGAGATGAGAAATACTAGT
Associated Phenotype:
Not determined