ZMP

si:ch211-1n9.6

Ensembl ID:

ENSDARG00000039468

ZFIN ID:

ZDB-GENE-090313-70

Description:

Novel tripartite motif-containing protein [Source:UniProtKB/TrEMBL;Acc:B8A5D5]

Human Orthologues:

TRIM16, TRIM16L, TRIM25, TRIM29, TRIM47, TRIM8

Human Descriptions:

tripartite motif-containing 16 [Source:HGNC Symbol;Acc:17241]
tripartite motif-containing 16-like [Source:HGNC Symbol;Acc:32670]
tripartite motif-containing 25 [Source:HGNC Symbol;Acc:12932]
tripartite motif-containing 29 [Source:HGNC Symbol;Acc:17274]
tripartite motif-containing 47 [Source:HGNC Symbol;Acc:19020]
tripartite motif-containing 8 [Source:HGNC Symbol;Acc:15579]

Mouse Orthologues:

4933422H20Rik, Trim16, Trim25, Trim29, Trim47, Trim8

Mouse Descriptions:

RIKEN cDNA 4933422H20 gene Gene [Source:MGI Symbol;Acc:MGI:3588186]
tripartite motif-containing 16 Gene [Source:MGI Symbol;Acc:MGI:2137356]
tripartite motif-containing 25 Gene [Source:MGI Symbol;Acc:MGI:102749]
tripartite motif-containing 29 Gene [Source:MGI Symbol;Acc:MGI:1919419]
tripartite motif-containing 47 Gene [Source:MGI Symbol;Acc:MGI:1917374]
tripartite motif-containing 8 Gene [Source:MGI Symbol;Acc:MGI:1933302]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa16387	Essential Splice Site	Available for shipment	Available now

Mutation Details

Allele Name:

sa16387

Status:

Available for shipment
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Availability:

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Mutation:

G > T

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000101060	Essential Splice Site	318	545	6	7
ENSDART00000139353	None	None	61	None	1

Genomic Location (Zv9):

Chromosome 13 (position 22955852)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	13	22685190
GRCz11	13	22815640

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

CACCATGCAATGATGCATTGGTTTCAAAATGAATCTYACTTAAGTTCTCA[G/T]GTRAAATTGCCGYTTGTGTCTGTGAAAGASCAAGAGSACAGCACTAAAGA

Long Flanking Sequence:

AATAAAAATAAATAAAATAAAATACTATACTAATACTACTAATACTTCCCTTCTTAGACTTTACAGACCTGAAACTTGCTTATAGCACTTATTCATTGTTGCTCTTGGTTGTGTAAATTGCTTCCTTGTCCTCATTTGTAAGTCGCTTTGGATAAAAGCGTCTGCTAAATGACTAAATGTAAATGTAAATATATATAATTTATTTATTTTTTTTTTTACTAAAGAATATAGTTCTGGAAAACAAAACATAAAAAATGTATATTTAATTTTTTAGCCATGGTCATGGATTTAATATTTCCATAGCAAAGTATAAAAACAAGCATCTTTGTACATAATTGCAGCAGAATTATCTGAAATAGCTTAACAAACAAATTATTTTGGAAAACTGATGAGAAAAAAAATGGAGATAATTACTTTTTTGTCAGGTTAAATATTATAATTCTTAAAATCCACCATGCAATGATGCATTGGTTTCAAAATGAATCTCACTTAAGTTCTCA[G/T]GTAAAATTGCCGCTTGTGTCTGTGAAAGAGCAAGAGCACAGCACTAAAGACAAGATGAAGACAGCTGAAGAGCTCATTGATACCCTACAGGAAGTTGTCTTTCAGAAGACTCGGCGGCTGTGGTCCAGTAAGTCTGATGTAAGAACATATAAAAAGCACAATTTTGTAAATAAGAATCTTAAAATACCTAATTTGATCACCTGCAGGTCTCAGATCAGTGAGTTTAGACCCAGAGACTGCACACCCAGAGTTGGAGGTTTCAGGAGACCAGCTGGAGGTTCACTGGAATAAGAAAACAACCCCCAAGAGAAAAGAGAAAGCAAATATCTGCTCTCAGTACAGCGTACGGGCCAAAGAGAGATTCTGCTCTGGCCTCCACTACTGGGAAGTGGCTGTTTGGAGGAAACCCTATTGGCTGATTGGTCTGTCATATGGGCCAGCCACGGGAGATCAGGAGTTAGAGCACTGCAGTGGAGACTTTAATAATGCTTTCTGCTACA

Associated Phenotype:

Not determined