ZMP
slco1f1
Ensembl ID:
ZFIN ID:
Description:
solute carrier organic anion transporter family, member 1F1 [Source:RefSeq peptide;Acc:NP_998082]
Human Orthologue:
SLCO1C1
Human Description:
solute carrier organic anion transporter family, member 1C1 [Source:HGNC Symbol;Acc:13819]
Mouse Orthologue:
Slco1c1
Mouse Description:
solute carrier organic anion transporter family, member 1c1 Gene [Source:MGI Symbol;Acc:MGI:1889679]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25314 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa30868 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa25314
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109380 | Essential Splice Site | 410 | 565 | 8 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 62641850)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 70581757 |
| GRCz11 | 4 | 72097427 |
KASP Assay ID:
554-7493.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCCCTTGCCATGCGGGCTGCAATTCCACCCAGGGTGCAGGATGGAATAAG[G/A]TGAATGCAGCGAATAACAATCTTACACTATCTCCTTCAATTATTACATGT
Long Flanking Sequence:
TTCCAGTCTGTTTTAACTGGTTGCATATTTGTACACTGTACATAGGAGTGACATGTATTCCGGCAGTGGCTCTGGGTATTTTCCTGAGTGGGTTGATGATGAAGAGGTTTAAATGGGGTTTGCTGGCATCCGCAAGAGTGAATTTGTTCACCGGTGTCACCATGTTGCTTTTGGCCGTACCCTTCTTCGCTCTCAGCTGTGAAAATCTAGATGTCGCAGGGGTTACAGTGCCCTATCAAGGGTACTTTTATCTCTATCCACCTTTTCAATCCATTAGTTTTCAAATCACTTGTACACTGTAGGACAACATAACAAGGAATTGTTCATGTGGCAGATCTACTGAAGTTCAAGGTGTAATAAGCGATGTACTCCCTTCTTGCAATGCTGACTGTGGGTGTCCAGACCTCCAGTGGGATCCAGTGTGTGGAGAGAATGGAGTGACCTACATCTCCCCTTGCCATGCGGGCTGCAATTCCACCCAGGGTGCAGGATGGAATAAG[G/A]TGAATGCAGCGAATAACAATCTTACACTATCTCCTTCAATTATTACATGTTTGTAAGTGTATTTTCCTCTCTCTTGTCTCATTTTTGTCAGACATTCCATGACTGCAGGTGTATTCAGAGCTGGGGACTGAGCGTTGGCAACTCCTCTGCAGTTCTTGGACAGTGTTCACGAGATCCCAACTGCAACCAAATGATCTACGTTTTTCTGGGAGTGCAGTCTTTGGTCTTGTTTGTGTACAGTCTTGGCGCTGTTCCCTTTCTCACTTTTTCTATGAGGTTCTGTTTACCTTCTATCTTAAAAAAATACATATTGTTGTGTGCTGTTTACATAATGTTTTGCTTCCCAAGATGTTTACTTGTTTTGGTCCTAACATTAACTTGCGCCCAACAAGTTAAGCAGGGCTACGCATGGTCAGTACCTGGATGGGAGACCACATGGGAAAGCTAGGTTGCTGCCAGAAGTGGTGTTAGTGAGACCAGTAGGAGGCATCAACTTGTGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30868
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000109380 | Nonsense | 544 | 565 | 12 | 12 |
Genomic Location (Zv9):
Chromosome 5 (position 62646140)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 70577467 |
| GRCz11 | 4 | 72093096 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTATTTGCCCCTATAAGGTTCCTCTTTCAGGGAATGACCATCGGCCTT[C/T]GAGTATTAGCCTGTTCCGTGCTCTGGATAGCCACCATAGAGATAAAGAGA
Long Flanking Sequence:
TAAAGCTACATACGGATTTGTGAAAAATGTATGGATATTTGAGTTTATATCCAAAAATGCTTATTGAGAACGTGTTCTTGCAGGATTGTGGATCCTGAGATGAAGGCTCTCTCTGTGGGAGTGTTACTGTTATCTATTAGAGTTTTGGGTGAGTTTGTGGTGTTTTATAAGGTATAATATCCATGTATTTGTTTTCTTATCCTAGACCAACACTCAGCATTGTTTATAATGCACTTTAACTTCCTTACAGGTGGTATTCCTGCACCCATTTACTTTGGTGGTCTCATTGACACCACCTGTCTGAAATGGGGCCAGAGGAAATCCTGTGGAAGGGGTGCCTGCAGAATTTACGACAATGAGACCTTCAGGTGAGCACATCTGGTCAATCTATTGTATTCCACAATTCAGTCTTATGTACTTTGAAGTACAAAAGCTCTAACTAACGCATACTATTATTTGCCCCTATAAGGTTCCTCTTTCAGGGAATGACCATCGGCCTT[C/T]GAGTATTAGCCTGTTCCGTGCTCTGGATAGCCACCATAGAGATAAAGAGAAAAAGTGCAGAACAATAAACAAACATCCATCCATTCATTTTCTTTCGGCTTACTACCTTTTATTCACCAGGGGTCGCCACAACGGAATGAACCTCTAACACAGGGGTCACCAAACTTGTTCCTGGAGGGCCGGTGTCCTGCAGATTTTAGCTCCAACCCTAATCAAACACACCTGGACAAGCTAATCAAGGTCTCACTAGGTATACTTGAAACATCCAGGCAGGTGTGTTGAGGCAAGTTGGAGCTAAATCCTGCAGGGACACCGACCCTGCAGGACCGAGATTGATGATCCCTGCACTAACATATATCCAAAGACATAGAACTTCAAAAGCCTATGCTATAAGATCCCGAACACCAGGAGACAAAAAAAATGGTGGTGTTTTATTTTTAGGTGCACTGTATGTTTATGGGCTTTGCTTTATTAAATGTTTCTGCAATATTATCAGTGTT
Associated Phenotype:
Not determined