ZMP
sema3d
Ensembl ID:
ZFIN ID:
Description:
Semaphorin-3D [Source:UniProtKB/Swiss-Prot;Acc:Q9W6G6]
Human Orthologue:
SEMA3D
Human Description:
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D [Source:HGNC
Mouse Orthologue:
Sema3d
Mouse Description:
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D Gene [Source:
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa1661 | Nonsense | Available for shipment | Available now |
sa15069 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa1661
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | Nonsense | 257 | 291 | 8 | 8 |
ENSDART00000127469 | Nonsense | 257 | 766 | 8 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8677228)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9254606 |
GRCz11 | 18 | 9212625 |
KASP Assay ID:
554-1608.1 (used for ordering genotyping assays)
KASP Sequence:
ATCCCTACAGAGGGCAAGTTCATTTCTGCCCATCCCATCTCAGACACCTA[C/A]AATCCTGACGATGACAAGATTTACTTCTTTTTCCGTGAGGCTTCTCGTGA
Long Flanking Sequence:
AAAGAACCAAAAGGCAGCCGTTCTGGCATGTAACTCACATTTTCAAAGCTGAATTTCTGACTTAGTATTGTTTTTCAGGTAAACAAGAATATTCACTCAGCATGTTTCTTAACAACTGCAAACATATTATGGTATTTGTATGCTTTAGAAGAGTAAAAAACTTACATACAACACCTTTAAGCCTAGTTTTACTAACAGCCAGTGCAAAAGTTTAGTTTATTTAGGTTTTTAGGCATGGACTCAGTTGTTTTTGCAGCAGACCTTATAACATTTGCATTTATGTTAAAGGTACTCTTACTAAAGTATAGTTTATGGGAGAAGATTAATTTAAGTTTGCATTTACTGGTAACAATTTTAATAAGCGTCCACACTTTCTTACAAGATTATAAAGGGATTGGTTGGATTACCATCACAGATATAAATTAAATCTGATCAGCTTTTGTCTCTCTTATCCCTACAGAGGGCAAGTTCATTTCTGCCCATCCCATCTCAGACACCTA[C/A]AATCCTGACGATGACAAGATTTACTTCTTTTTCCGTGAGGCTTCTCGTGATGGGAGCACTACAGACAAGAGCGTGCTGTCTCGTGTCGCCCGGATCTGCAGGGTAAGGCCCGTCCTCACGCTGCCTGATCACAGAGAAACTCACCTCATCTCTCTGATCCTCCTCAGAACTGAAGATTAAATGTGCTTCCTCTGGGGGGAGAGGCTTCCTGGTACGTTTCCCTTGATGTGATCTGCTGAAAGAGGACCAAACCACTGTCAGGCTGGGTAAATCAAAGTAGAGGTCTGGCCATGTAATTGCTGCCTGGACTGTCATTCCTGATCAGATGATCAGAGTCCCTTGGGTTGAGAAATTAATGTGTTAAGTGACTCCATTGTGTTAACACACAGCTTAAAGGGATAGTTCAAAATATGACAATTTAAACACTATTTACTTCCTCAAGTGGTATAATTTTCTTATTTTCTTAATACAAGATTTTTTTTTTTTTAAAAGAAAGCTGA
Associated Phenotype:
Normal
Stage | Entity | Quality | Tag |
---|---|---|---|
Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa15069
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000101192 | None | None | 291 | None | 8 |
ENSDART00000127469 | Essential Splice Site | 641 | 766 | 17 | 18 |
Genomic Location (Zv9):
Chromosome 18 (position 8693781)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 18 | 9271159 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTGAWCCGCTGGTTTGTACTGAAGCCAGGAGTGGACCACCGTCAAGAGG[T/C]ATCAGTAACCTAGAGTRYATCAGTGTGTGTGTGTGTGTGTGTGTGTGTGT
Long Flanking Sequence:
GGACACAGAGGATGGTAAGAAAGCATATGAGGGCGTACAGTCTGTGTGTGTGTGTGTGTGTGTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTCTCTGTGTGTGTGTGTGTGTGTGCGCAGCATAAAAGCACTAAAAGCTCTGTTTTGTTTTAAGATGCTGCATTGTCCTGTGGGGCTCACCTAATGGACCTCAATGTTAACCCAAAAAAATGTCTTTTTGATATGCTGATCGCTCCCTCTCTCTTTCGCTTTTGCAGTGTTAGGGAGGAATGTCGAGGAGAAGGTGTTGTACGGAGTGGAGAGTAACTCCTCTTTTCTTGAGTGCGTTTCGAAATCCCAGCAGGCCTTGATCCGCTGGTTTGTACTGAAGCCAGGAGTGGACCACCGTCAAGAGG[T/C]ATCAGTAACCTAGAGTACATCAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTGTGCGTGTGTGTTTTTTGTTCACCTACTTTGTAGCTACACTGAAAAAATATTCATTGGATTTACTAGATTTTTTAAGGTAACTGGTTGCAAACAATTCAACACAGGGTCATTCTGAAAACGTAGCCCTATATACATTTCTGGAGGTCGCAAATTATGTAGTCAGAAGTACGTGTGGCTGCATTTCATCTTTCATCTTCCTTTTCATGCTTACCAGCTGACCACTTACCTCCATGTGGACAGCTTTCCCGTTGTTACCAGTTTGTCCAGTGGTTTGCACCATACGTTGGCCCCAAGACCCCGACAATGGGGTTCAAGTCTGATGAAGGTTGGTTCCAAAAAGCAGGTAAAACAAAAACAAAAGGCAAAAAATAAAATAAATAAGTAAATAACAGTGT
Associated Phenotype:
Not determined