Busch Lab

ZMP

copg2

Ensembl ID:
ENSDARG00000034823
ZFIN ID:
ZDB-GENE-000208-8
Description:
Coatomer subunit gamma-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9PUE4]
Human Orthologue:
COPG2
Human Description:
coatomer protein complex, subunit gamma 2 [Source:HGNC Symbol;Acc:2237]
Mouse Orthologue:
Copg2
Mouse Description:
coatomer protein complex, subunit gamma 2 Gene [Source:MGI Symbol;Acc:MGI:1858683]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa33433 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa40262 Nonsense Mutation detected in F1 DNA Not yet available
sa30848 Nonsense Mutation detected in F1 DNA Not yet available
sa30609 Essential Splice Site Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa33433
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043660 Essential Splice Site 81 873 4 23

The following transcripts of ENSDARG00000034823 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 4 (position 15050313)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 15986166
GRCz11 4 15984921
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGCCACTGAAGCTTTCTTTGCCATGACAAGGCTGTTCCAGTCTAATGAT[G/T]TAAGAAATTGACGTTCATTTAGTTTTTTTTTTTTTTTTTTTTTTTTGTTA
Long Flanking Sequence:
ATATATATATATATATATATATATATATATATATATATATATGTTTAAATAATATTTATAGTAGCTGAATGAATGCACTAACCTTTAGCTGATTAACATCTGTATTGTGATGTGTTTAGGAAGTGGCTCAAACCCCTTTCAGCATTTGGAGAAGAGCGCTGTACTACAGGAGGTGAGTTTAATACCGCTGGATATTAAAATGACATGAATGTCTCTTTAGTGTTGTATTTTAAAACGCTTTATATGGTTGTTTCAAAGGCTCGGATCTTTAATGAGACGCCTATAAATCCAAGAAGATGTCTGCATATCCTGACCAAGATCATTTACCTGCTCAACCAGGTATCTGGGCACATATTTTGAATTGATTATTACAATTTCTATATCCTTCTATGTGGACTGATGCATTACTAAGCTGTTTTATTTTTCAGGGTGAGCATTTTGGAACCACAGAAGCCACTGAAGCTTTCTTTGCCATGACAAGGCTGTTCCAGTCTAATGAT[G/T]TAAGAAATTGACGTTCATTTAGTTTTTTTTTTTTTTTTTTTTTTTTGTTAAGTGATGTTAAATCGAACCTTTTATTTATTTATTTTTATTATTATTAATTATTAAAAAATAAATAAATGGATATCATTTAATGTAATTATTTTTAACATTGAATTATATACACTAATTTTAACCCTGAACTAATGCAATGAATGTATTAAGCTACATTAATATTTAACTATATTAAATGTAGTTCAAAAATCACTCGCATTATTGAGGCTGTTGGTTTTCGAATTGGTCATTAATCAAACATGCTAGCACAGTTTGATCAATAAAAATTGTGTATGTGTGTGTATTTATGTACACCGACCAGGGTTGTTTTCATAAACTAAAGCTATGAAGAACATTGAAATTGAATATAATCTAAATAAAATATTACAAAATAAAAGCATAAAACTGACAAAAATAACAATCGTTATCAAAGAAGTTAACCTAAAATAACTTTGTCTAAGGACTGTAAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa40262
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043660 Nonsense 142 873 7 23
ENSDART00000043660 Nonsense 142 873 7 23

The following transcripts of ENSDARG00000034823 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 4 (position 15051574)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 15987427
GRCz11 4 15986182
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTCTTCTTCCAACCGTTCCGTCAGACCACAATGTTGCAGGCTATTGAA[C/T]GATACATGAAACAGGCCATTGTGGACAAAGTGCCCAGCGTCTCCAGCTCT
Long Flanking Sequence:
TTGCATTGCATTCTTAGCAAACCCTGAGAAGAATGTGCTACCTGACCATAAAGGAGATGGCCAACATCTCAGAGGATGTGATCATTGTTACAAGCAGGTGAGAAGCTCCGGTTGCCATGGCAGCATTTTTAATATTATTTGCAATATACTTTTTATAATGCATGTAGCTTAAAAATACATTATTAAATGAAGAACGGAAATCATTGGACACGCCACATATATTACCTTTAAGAAAAGCGCTGATGAATGTTTTGTTTGCGTCTCAGCTTGACAAAGGACATGACTGGCAAAGAGGACGTTTATAGAGGACCAGCAATCAGAGCTCTCTGCAGGATCACTGATGTGAGTCTCAGCTGCTTGAAAACTCATTTAATTGGCTCTCAGGGAGACATAAAGTACATTAAAACTAAAGGAACTCATATAAATGATCTTTTCTGTTTATGGATTAACTGTTCTTCTTCCAACCGTTCCGTCAGACCACAATGTTGCAGGCTATTGAA[C/T]GATACATGAAACAGGCCATTGTGGACAAAGTGCCCAGCGTCTCCAGCTCTGCTTTGGTTTCATCACTAGTAAGATCACAATCTAATGTATTATCAACATCCTTATTACGTTGTCAGAAAAGTAAACCAAAGGAGCTAGCAAACATATTAATGAGATGAAATAAAAAGTATGACTATGATATTGACAACCATCCTCTTTTTTTTTTTTTTTTTTTGTATGTGTTTTGGTTTGGTTTATTTACGCAATTTATAAGACAATATTTGTTTTGTATCGTTCAGCTTTTATGTTAATGCTCTGTATTTGATATCATCTGCATATTTTGCAATTAAGAAAACCAATAAAAAGTTTAAATCATAAAAAAACACAAATGATTGGTTAGTTCTGAATGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATAAATAAATAAATAATATAGCTCTGTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30848
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043660 Nonsense 142 873 7 23
ENSDART00000043660 Nonsense 142 873 7 23

The following transcripts of ENSDARG00000034823 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 4 (position 15051574)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 15987427
GRCz11 4 15986182
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTTCTTCTTCCAACCGTTCCGTCAGACCACAATGTTGCAGGCTATTGAA[C/T]GATACATGAAACAGGCCATTGTGGACAAAGTGCCCAGCGTCTCCAGCTCT
Long Flanking Sequence:
TTGCATTGCATTCTTAGCAAACCCTGAGAAGAATGTGCTACCTGACCATAAAGGAGATGGCCAACATCTCAGAGGATGTGATCATTGTTACAAGCAGGTGAGAAGCTCCGGTTGCCATGGCAGCATTTTTAATATTATTTGCAATATACTTTTTATAATGCATGTAGCTTAAAAATACATTATTAAATGAAGAACGGAAATCATTGGACACGCCACATATATTACCTTTAAGAAAAGCGCTGATGAATGTTTTGTTTGCGTCTCAGCTTGACAAAGGACATGACTGGCAAAGAGGACGTTTATAGAGGACCAGCAATCAGAGCTCTCTGCAGGATCACTGATGTGAGTCTCAGCTGCTTGAAAACTCATTTAATTGGCTCTCAGGGAGACATAAAGTACATTAAAACTAAAGGAACTCATATAAATGATCTTTTCTGTTTATGGATTAACTGTTCTTCTTCCAACCGTTCCGTCAGACCACAATGTTGCAGGCTATTGAA[C/T]GATACATGAAACAGGCCATTGTGGACAAAGTGCCCAGCGTCTCCAGCTCTGCTTTGGTTTCATCACTAGTAAGATCACAATCTAATGTATTATCAACATCCTTATTACGTTGTCAGAAAAGTAAACCAAAGGAGCTAGCAAACATATTAATGAGATGAAATAAAAAGTATGACTATGATATTGACAACCATCCTCTTTTTTTTTTTTTTTTTTTGTATGTGTTTTGGTTTGGTTTATTTACGCAATTTATAAGACAATATTTGTTTTGTATCGTTCAGCTTTTATGTTAATGCTCTGTATTTGATATCATCTGCATATTTTGCAATTAAGAAAACCAATAAAAAGTTTAAATCATAAAAAAACACAAATGATTGGTTAGTTCTGAATGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAATAAATAAATAAATAATATAGCTCTGTATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30609
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000043660 Essential Splice Site 408 873 13 23

The following transcripts of ENSDARG00000034823 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 4 (position 15055061)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 15990914
GRCz11 4 15989669
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAAGCACAGCGTAATGATGAACTTTCTCTCAAACATGCTGCGAGACGATG[T/C]AAGTTCATTTAAGGACGTTTGTTCCTGTGGTTTCTTTTGCCGAATCACAC
Long Flanking Sequence:
ATGCAACCTGGACCTGGAGAATCTGATCACTGACTCCAACCGCAGCATCGCCACCCTGGCCATCACCACCCTGCTGAAGACCGGCAGCGAGAGCAGTGTAGACCGCCTCATGAAGCAGATCTCCTCCTTCGTCTCCGAGATCTCAGATGAGTTCAAGGTGATCTCATCACTAAATTTGAAATTGCACAGTAACCTTAATGCACAATCCCTAAATGAGTCCACTAATAGTCAAAAAAATGAAGACAGAGTGAATTTAAATACTGTGAGTAGGTTATAAACGGACTGATTTGAATTTTGATGGACGCTATCATCTATAAACTAAATTATATCTGTGTGATTTTACCCTGTATATTGGACAAACTACAGAAAAATTCACTTATTTCATGGTGTGTTTGTTTTCTAGGTGGTTGTGGTCCAGGCCATCAGTGCTCTGTGCCAGAAGTATCCGAGAAAGCACAGCGTAATGATGAACTTTCTCTCAAACATGCTGCGAGACGATG[T/C]AAGTTCATTTAAGGACGTTTGTTCCTGTGGTTTCTTTTGCCGAATCACACGATCAGATTTACACTGATACCCTTTAATGCCTGCTTTACTCATGACCAGTGCTGCGTTGACTTGGAATTTAAACTGACATTGCTGTAAAACGATGTAAGACAAATATACAAGGGGGGCTAATAATTCAGACTTCAGCTGTATTCATCTATATTGACCTGGTCAAAAAGTTGTTGATAAATAAATATTAGTCATTTCATAGATTGATTTGTGTTTGCATATGCAGGGTGGCTTCGAGTACAAGAGGGCCATTGTAGACTGCATCATCAGCATCATCGAGGAAAACCCGGAGAGTAAAGAAACCGGTCTGGCCCACCTGTGCGAGTTCATCGAGGACTGCGAGCACACCGTCCTGGCCACTAAAATTCTCCACTTGCTGGGGAAAGAGGGTCCTCGTACCCCTACACCCTCCAAATACATCCGCTTCATCTTCAACCGTGTGGTGCTGGAGA
Associated Phenotype:
Not determined