Busch Lab

ZMP

tnr

Ensembl ID:
ENSDARG00000020771
ZFIN ID:
ZDB-GENE-030804-1
Description:
tenascin-R [Source:RefSeq peptide;Acc:NP_919364]
Human Orthologue:
TNR
Human Description:
tenascin R (restrictin, janusin) [Source:HGNC Symbol;Acc:11953]
Mouse Orthologue:
Tnr
Mouse Description:
tenascin R Gene [Source:MGI Symbol;Acc:MGI:99516]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa44538 Essential Splice Site Mutation detected in F1 DNA Not yet available
sa30599 Splice Site, Nonsense Mutation detected in F1 DNA Not yet available
sa6854 Nonsense Mutation detected in F1 DNA Not yet available
sa31286 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa44538
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000015827 Essential Splice Site None 1350 3 24
ENSDART00000143787 None None 156 None 3
Genomic Location (Zv9):
Chromosome 2 (position 35079280)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35375990
GRCz11 2 35358447
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCCTTCTTTGTGGTGAGACAGGAGGAACATCAGCACTGGCACTTAAGG[T/A]AAGATAAGACTCCTTTAGCGAGAGCAGTTCTAATGTGTCTTTTCCAGCTA
Long Flanking Sequence:
CAGTGATTAATTCTGAGCTCACTTTGAGATTAAGTTTATGTATATTTGCTTAGCATATTGTATATAGCCGTGGTTGGAGTGTGAGAAACATTTGTATATGGGCCATGTTTTATTTGTGATAATGCAAAGGAACATGTCTATTGAGAAATGTGCACAAGAGAGGCTGCTAATTAAATTCAAGGGATGAACCAATAAAATAACACATATGTTAGTCAGTGTGTACTTTATTTCTGTCTGTTTGATGGTTAATTTAAAAAATCCATAGAATTCTGTCAGTCTAAATGCCAGTCAGTTTTAAACGGAGATGGTCCTCATATTTTGTCTGCGTATTTAAGCTTGCAGTGTCATTAAAACCAGATATTGTGCATATGTCCCCTCCAGACATCACTTTTGCCCACTTTTTTATGGCTCAATTCAGTGATGCACTTCCTCTTTTTTCTAGGCACTAGTTATCCTTCTTTGTGGTGAGACAGGAGGAACATCAGCACTGGCACTTAAGG[T/A]AAGATAAGACTCCTTTAGCGAGAGCAGTTCTAATGTGTCTTTTCCAGCTAGGGCTGCACAATTCTGGCTCAAATGAGATTCAAAATTTATTTAGCCTAAAATCAATATCACGGTTTTCTCCCGATTCTGTAGATGTAAAATAAAAGTTAATATGAGTAGCCTATTGTTATTGTTATTTCTCAAACATATGATAAAACAACAGTAATATTATTAGCCCTATATGTAGTACTTCTGTTGGATAAAAATGCTAAAAATTCTGTTCTCACTTGGAATAGTGGACTTGAACAGATTTTAAATATGTCCTAGCTGTTCATGACTCTGAAGTTGAATTATTGTGTTTGAGATGTTTGCTTGTCATTTGTCATTGAGAATATTGTTAGACAACTTTTTTCACTGGTAAAATGAGACATTTGTCATTATCAAATTCCATCTTGAATTATATTCAAAATTACATAGGCTACAGTAATTATACTGACCTAGTAAACATTTATTTTCATGCA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa30599
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Splice Site, Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000015827 Splice Site, Nonsense 409 1350 7 24
ENSDART00000143787 None None 156 None 3
Genomic Location (Zv9):
Chromosome 2 (position 35130544)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35427254
GRCz11 2 35409711
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAACGCACATAGGACGGAGGCCAATAATGCATCAATCTGTACCTTTCAGA[T/G]CTCTCAAATCCAGACGGTTTACTCTTCAAATCCATCATGGAGACATCCGT
Long Flanking Sequence:
ATTAAGAGGAACTGAGACTGTGAGAGCTATGGTAAAAATGATTGTATGACTGCACATTTATTACTTACACACTTTTGTATGCCATCATACACTTTCAATAATCCAAACACTCCCAGAGCAGAGATGGCGTGTTTTATTACTGTTTCCATGAAATTACCTTCAAATCCTCTTGAGGCTCATGCATTGTTGACAATGAAAAGGCTGGAGGTTTACTTGTATGTACTGTGAAATGACTGTAATAGTATTTTGTGACTTGTATTCTTTGGGATTCCCGACTGCATCTATTATACAACAAATGTAAACAGATAGAAGAGACGATGCATATTGAAAGTAACTCCAAAAAAATAAAATAAAATAAAATAAAATAAGCTGCTTAGTATCCACTGCTCTTTTTACAGAGCTAAAAGCAGAGTAAAGATCTGCCTTGGCTGAGAAAAATGCTGATTTATTGAACGCACATAGGACGGAGGCCAATAATGCATCAATCTGTACCTTTCAGA[T/G]CTCTCAAATCCAGACGGTTTACTCTTCAAATCCATCATGGAGACATCCGTGGAGGTTCAATGGCAACCCTTAGACTACTTGTTTGATGGTTGGGAAATAAGCTTCATTCCCAAGGTAAGGCTTTCCTTAGAAGGTCACACTTCATTTGATTCTGCCTCTGCTGTACCTTCTGGCGTAACAACACAGAGGTCCTGGAATCTTGTAGCATTTTCAGACTTTAGCGTCCACCGTGTTGTATTTGGACAACAATAAACAAGGAAAGAGCAATGTAAGGTTTTTACAGACATCTGGGCGCAGCTGATAATTTAATGCTTTTTGAAACGATGATTCGGTTTCTGACAGGTGCTTCTCAGCATGATAAATGTCAGTCTGTCTGTGTTTGAAAGAGAATTATTTTGCATCATGGCAGAAACACAATACATCCAGGCAGAGATGTTCACTAATCCCCTTTCAAATATTCCATCTGGAGAAAGGACAAAACATTTTCAGCATGTGCATAC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa6854
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000015827 Nonsense 475 1350 8 24
ENSDART00000143787 None None 156 None 3
Genomic Location (Zv9):
Chromosome 2 (position 35134486)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35431196
GRCz11 2 35413653
KASP Assay ID:
554-5300.1 (used for ordering genotyping assays)
KASP Sequence:
AGTACCATCACATCTTTCCACCAAACGGGACTGAAGCCTGGAGAAGAATA[C/A]ACTGTCAACCTGGTGGCCCTGAAAGACCAAGGCAGGAGCCTGCCTGYTAC
Long Flanking Sequence:
GACAAGTGTGCATTCACCAAGTCAATGGCAAAGAACAAAAGGGAAAAGGCTTTTTAGAACAGTCACATCTTCTGAAACTCTCACACACTTTGATATTGCTTGATTTCGTAAGCTTTCCAGGGAGGTTAGTCGATGTCTTGTGGGGTGTGATGCATCAAACTTACAAAGTGCTCTGCTAAGCGATTTGGGGAAAAAACAAGACTTGATTCAATACATCAAACATCTGGCGAAACCAATCTAAACAGAAATTCTAGCAGCTTGTTCTTTTTTTTTTTTTAAACAGCTGACTGGCTTCTGAAAACAGTTTCTGTTGATTTGAGCGGTAGACTGTTGTTTCTGCATGCCTGCCTGCACTCTGATGCCAGAATTTTGAAATGTGATCTATTTGCATGTGTTTGTGTCTTGTGCATATCAAAGGACAATGATGGAGGGATGACAGCACAGCTACCCAGTACCATCACATCTTTCCACCAAACGGGACTGAAGCCTGGAGAAGAATA[C/A]ACTGTCAACCTGGTGGCCCTGAAAGACCAAGGCAGGAGCCTGCCTGTTACCGCAACTGTTACCACACGTATGCCTCTCACTCATTTACATCACTTTTATGCAGTTGGCAGACTTTTATTCCAAGCGATTTAAAGTGCATTTAAGTACTATGCTTATGAGGACATGCTGTATGTGTATGTGTGTTTCCCTGAAAATCAAATCTGCGACCTTGGTCATTGTTAGCGCCATGCTCCACCAGCCAATCTATAGAACACCCACGCCTCACTGTTTCGTTCTCCAATAACTGCGCTGCGTTTTTCTTGAGCTTTCTGTATATAGCTTTGATTTTTAATGACCTACAGTACCACAATTGTTCGGTTCATGCATTTACCCTACACTTTCACTATATTTTAAGTCAATAAGTTTTGTGTAAGAATCCATACTGTGGCTTAAGCACTTTGTAGTTGTTTGTTAATTGTTTTTAAGGAACTTTCATCTCTGCTTCATGGAGATAAAACTAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31286
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000015827 Nonsense 1287 1350 23 24
ENSDART00000143787 None None 156 None 3
Genomic Location (Zv9):
Chromosome 2 (position 35189747)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 35486457
GRCz11 2 35468914
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCAAGGACAAAGACAATGACATTGCTGTCACCAACTGTGCACTGTCTTA[C/A]AAGGGAGCCTGGTGGTACAAAAACTGTCATCGGGCAAACCTTAACGGCAA
Long Flanking Sequence:
GAATGAACCTCATGATCGCTCAAAGTTCATAGTTATGAAACATAAACCTTAATGTGTTTATTTTATTTACAATAACTTTCACTTTCAAATGAAAACCGTATATATATTTTTTTTCATAGTCCCATGATTTTTTAAAAGACAAACATATGTTTATCAGCAAAATTCGACCTCAATATGTTGATGCTGATATAATTCTAGGTTTTTCTAGAAGCTTAACCATTTGTTAAAATGTGAACAAAATAATCTACATTCTGAGAGTCTTAAAGCGAAAATTTACTTTAAAACAGAAAAAAAATATGCTTTAAAATACAATAATATGCTTTAAAAAATATTTATGTTCTTGGTGAAACCTGACTTGAAAGAGTTGTAAGGGTTAAGCTTGTTTTTTATGTGTGGTCTCTTTTTGTTCCAGGAGATTCTTTGAGCTACCACCAGAGCCGACCTTTCTCTACCAAGGACAAAGACAATGACATTGCTGTCACCAACTGTGCACTGTCTTA[C/A]AAGGGAGCCTGGTGGTACAAAAACTGTCATCGGGCAAACCTTAACGGCAAATACGGAGAGTCTAGACATAGTCAGGTAAGCCTGATAGTACATACTGTAGCACTGGACTAAAATATCTACTATAGAGTATACTCCTATGAAGTTTCAGTTTATTTCATGTTCTGCAATATTTGTTAGCAAACATTTTACAAACAGTGCAATCTGGAATTTTAAATGAGGATGAAAGATTCCTCAGTTATCTTGCCAAATCTGAAACAATTCTGAAATTATTAGTAAATTTCACAAACATACAAAGTTAACCAACTTAATTGGTTTTAGTTCGCATTCAGCTAGAAGCAGTAACAAAACAACAGCATCCCATTTATTTCAGTAAAGTTCTGCGGATTTCTGGTAGCAAGAGTGACAGTAACTGGTGGCAAAATGGCATCCTGGTAGTGATATAAAAATTACAAATGGTTTTGGCAGTATGAATGGATTTAAATAGTATTTTTTAAAGGTTG
Associated Phenotype:
Not determined