ZMP
trpa1b
Ensembl ID:
ZFIN ID:
Description:
transient receptor potential cation channel, subfamily A, member 1b [Source:RefSeq peptide;Acc:NP_0
Human Orthologue:
TRPA1
Human Description:
transient receptor potential cation channel, subfamily A, member 1 [Source:HGNC Symbol;Acc:497]
Mouse Orthologue:
Trpa1
Mouse Description:
transient receptor potential cation channel, subfamily A, member 1 Gene [Source:MGI Symbol;Acc:MGI:3
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa16565 | Nonsense | Available for shipment | Available now |
| sa11221 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa16565
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Nonsense | 278 | 1120 | 8 | 28 |
| ENSDART00000126769 | Nonsense | 278 | 1107 | 7 | 27 |
| ENSDART00000148367 | Nonsense | 306 | 1148 | 8 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13579488)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13530936 |
| GRCz11 | 24 | 13675355 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTGTTTTCGCAGAGTGGCAAATGCACRGCCCTCCACTTTGCCWGCAGT[C/T]AGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACA
Long Flanking Sequence:
ACTGATTTAAGTAAAATCTGTTTAATAGAGTACATAAAATCCCATTGCACCCTGAAAAATGTTTTCGGTACAAAATGTATACATATACCCATTCCTAAAAAAAAAAGGTTTAAATGCAGCCTGAATACCTGACCCCCAATCTGGACCACACAAATACACTAGCGACTCCTCCATTTGTCGTCTTCAGTCCATAGCAGTGAGGTTGATGCATTCAGTAATAGCTTCAGATAGTTAAATTGATACAAATTGCTGCCACTTACGTTTATAACTGAGCTTGGTCGTTCTGTCCATTGCCACGGCAATTCAGGGCACTCTTTCTCATTAATGGTTCGTGTTACTGGTGCAGCAACTGAGAGATTGTCCCCCTTTTGCACTACCTGACCCTGCCTCTTCTACTTCTGTCAGGCTAATAGCCGCCTTCCATCTCTGTGCCTGTATGTGTGTGGCCTGATTTGTTTTCGCAGAGTGGCAAATGCACGGCCCTCCACTTTGCCTGCAGT[C/T]AGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACAGAAGATATCGTCAACATTCGGGATGGAGCCAATCGGACACCTTTGCATAGGTCAGTTGGATGTCGTACTGTGATAAAGTAGACATTATGGGATGAGATTTTTGCTACTGGTAATCCAGGTGCTGATTTATTTCATGTCAGTTCACATGTCAGAACCCAGTCTCATTAAAGATACCAACATAGGATATTTGTGGAGTATGTATGGCCGAATTTTAAAACGAACGCTATGGGGCCATGTGATGCCGTTCCTTCTTAGCACTTACCAGCTGACCGCTTACTTCCATACGGACGGCTTTCCCGCTGTTACCAGTTTGTCCAGTGAGCTCGCCATGTAGGTAGGCGGACTTGAGATGCAGAGAGGAGATGACTACGACGATGGGGTTCAAGTCTGGTAAAGAACGGTTTCAACAAGTGGGAAAGACAAAAACAGAATTAAAAAAATAAAATAAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11221
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000105997 | Essential Splice Site | 327 | 1120 | 9 | 28 |
| ENSDART00000126769 | Essential Splice Site | 327 | 1107 | 8 | 27 |
| ENSDART00000148367 | Essential Splice Site | 355 | 1148 | 9 | 28 |
Genomic Location (Zv9):
Chromosome 24 (position 13588481)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 24 | 13539929 |
| GRCz11 | 24 | 13684348 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGCHACGCTRTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAG[G/A]KAAATGTCTGAATGACTTGCTTTGTGAATAATCCAAACCCCAACCTTTAT
Long Flanking Sequence:
CTTATAAGTTGTTTACTATTTAAGACTTTTTATTAAAAAAAAAAATGTTACACACACTGTTTGCTAAGGAATGCAAAAACTTAGAAGCTCAATATCTCAAAATCATTCAGAATGCAGACAGAACCTTATAATTCCAAGGTGACGAAATGCAGATACGTTTTTTATCTTTTTACCGTTTGTACCTTTTTCACTCATCATTTCCAGTAGGTTAGAGACTAGTGGGGTGGAGCACTTTAAATTTTGAGCAGGGCAATTTAGACACCTTCTCCCCCCATGACCATGCCTCAGTAAACAATTAAGGACAGAACCCATTATTTTCCTCTTTGTGCTGAATATAGACCTCTGACATGTTCATTTTTCTTTTGTTTATATTATTAATATATATGCCGTAGTAAATATTTGATAAATTGTCATGCTTCAAAGATTAACAATGACTTTCTTCTCCTAATAGAGCCACGCTGTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAG[G/A]TAAATGTCTGAATGACTTGCTTTGTGAATAATCCAAACCCCAACCTTTATTCTGCTGTGCGTGCACTCTTTGAACCAACAAGCTGCATCGCTCAAATTGATCTCGTGATAAAACAAGTATTAAGAATCCAATATCTCATCATCTTATCACATGTCTTTTGATAAAGCCTAATACACTGTCATTGGATCTCATTTGTCTTGGAAAGGGAGCAGAAATTGACTCTATTGACTGTAAGGGACTGTCTCCGCTTCTGCTCGCCTCCAGCTGCAGCGCTTGGAAAACAGTTGCATATCTGTTGTCCATTGGTAAGACATTTCTATTGATTTTCAACACATTTTCACTAATATCATTTGCATGCACATTATGATGCATTTAATATTTTGTTGTGTTATAAAATAGGTGCAGATTTTAAAATCAAAGAAAAAACAGGTCGCAACTTCCTCCACTTTGTTATTCTTCAACCTAAAGGCCTAAAAAATCTTCCTGAGACGGTTTTGCAG
Associated Phenotype:
Not determined