ZMP
hdac1
Ensembl ID:
ZFIN ID:
Description:
histone deacetylase 1 [Source:RefSeq peptide;Acc:NP_775343]
Human Orthologue:
HDAC1
Human Description:
histone deacetylase 1 [Source:HGNC Symbol;Acc:4852]
Mouse Orthologues:
Gm10093, Hdac1
Mouse Descriptions:
histone deacetylase 1 Gene [Source:MGI Symbol;Acc:MGI:108086]
predicted pseudogene 10093 Pseudogene [Source:MGI Symbol;Acc:MGI:3704479]
predicted pseudogene 10093 Pseudogene [Source:MGI Symbol;Acc:MGI:3704479]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa3005 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa3005
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000051799 | Nonsense | 46 | 480 | 2 | 14 |
Genomic Location (Zv9):
Chromosome 19 (position 31056531)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 19 | 30223820 |
| GRCz11 | 19 | 29811133 |
KASP Assay ID:
554-2564.1 (used for ordering genotyping assays)
KASP Sequence:
CCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTA[T/A]GGGCTGTATAGGAAAATGGAGATTTATGTAAGGGAAATAAACAAATGCTT
Long Flanking Sequence:
TGAGCTCAATATATTTTTAATTTTAGAAACATTTAAAATATTTTGGGACAGTAAGCATGTTGGCTAAATTAATCATTGACTTCTGCTGGCTTCGTTTGTTTCAAAAACACAGCTTTCTTCACAATTTTAAAGGGCATCTTTGGATATTTTTGTTTGCCTGTAGATACTGTAGTCCAAAAAAAAAAAAAAAAGTCAATAAATTTTTTTTTTCATCTACCTTGGAAATGGTATTACAGAGAAATTCATTGTTTTAAAACCTTGACTTTTCCAAACCATGGTTTACCTTGAAAACGGGTATCGTCCCATGCCTACCTGCGATGTGACAGTTGTGAGTGATCTTATTCAATGTTGATGCTGTAAAGATGTATTGTGCATCCCTTTGGATAATGCTTAAAAGTTGTGATTGATTTTGCAGGGGATGTCGGGAATTACTACTATGGTCAGGGCCATCCCATGAAGCCCCACAGAATCCGCATGACCCACAACCTTCTGCTCAACTA[T/A]GGGCTGTATAGGAAAATGGAGATTTATGTAAGGGAAATAAACAAATGCTTATAACTTAAGGGATTTGTTTCAGGGTTCTAGCTTAGTTGATTTTATTTTTTCACTTCTTTAGCGACCTCATAAAGCCAATGCGGAAGAAATGACCAAGTACCACAGTGACGACTACATCAAGTTCCTCCGCTCCATCCGCCCAGACAACATGTCCGAGTACAGCAAGCAGATGCAGAGATGTGAGTTGCTCTTTTTATTTTATTATTATTATTATTATTATTTTTTTTTTTTTGCTGTGGATGATCTGACGTGAGGTCTTAAATAGGGCTGTAATGATACATAAGTCAATGATTTTATATGTTTTTAGATTGTTTTATAGCCAAAAAGATGATGTTATTATTATTAGAATTTCTAAGATGTGGTGAATGAAATGTAGGCCTATGAGTAATTTGGTATTGACCTATGATGGTGGACTTATATTGACACCACTATTCATAATTCTGAAGCTG
Associated Phenotype:
Not determined