ZMP
zgc:101782
Ensembl ID:
ZFIN ID:
Description:
leucine-rich repeat-containing protein 23 [Source:RefSeq peptide;Acc:NP_001006054]
Human Orthologue:
LRRC23
Human Description:
leucine rich repeat containing 23 [Source:HGNC Symbol;Acc:19138]
Mouse Orthologue:
Lrrc23
Mouse Description:
leucine rich repeat containing 23 Gene [Source:MGI Symbol;Acc:MGI:1315192]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29907 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa29907
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000004871 | Essential Splice Site | 70 | 326 | 2 | 7 |
The following transcripts of ENSDARG00000006174 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 20421926)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 20207033 |
| GRCz11 | 23 | 20133376 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGGAATGGTCTGTCTCATGCCTATGTCAGACTTGATCTTAAAAATAAG[T/G]AAGTTTGTTCGTTCAATAACACTTTTTAGTAGACTTTAGATATTCTAATT
Long Flanking Sequence:
TAAATTGTTTAACGTTACAAGTAAAATAGTTATTTTCAGTGCATCCTGTCTGTTAAGTTACTAACAAGCAAGCTAAAGTTAGCCAGCATGCTAATGATGTAAATTGATCGATCTAAATTCCCAATCATTTATTTCAACCCGTGAAAAGTTGATCGACAAGGTAGTTAAGATAGAAGAATAATGTCAGACTCTGGTGAAGATGAGGTATTGAAAGCAGACTCTGATCATGAGGGAGAGAATGAGGATCTGGAAGAGAAAGAGAAATCAGATGGAGATCAGGTATAAAATGTGTTTTCTTTGGTCTTATTTTAGTAACATTTTTATCCAAATAATTAAAATGATTCTTCGTGAGTTCATTTAAGAATCTCTCTGTCTCTCTCTTTACTCAGCTAGAGTCTTGTCCACTAACCCAGGACATTTTAGCGAGAAGTTTATCTTTGCTATGTCGCACAGGGAATGGTCTGTCTCATGCCTATGTCAGACTTGATCTTAAAAATAAG[T/G]AAGTTTGTTCGTTCAATAACACTTTTTAGTAGACTTTAGATATTCTAATTTCTAACTGCAACTTTTCAACTATTTTTCAACTAACAGTCATTAGAGCAGGGGTCACCAACCTTTATGAAACTGAGAGCTACTTCTTGGGTACCGTTTAATGTGGAGGGCTACCAGTTTGATAAACACTTCTCAAATAAAAAACTTGCTCAATTTACTTTTAATTATACTTTATGTTTTTGGTAATAATTAATGATATTCATCCATGTGAAGACACCAATCATGTTAATGATTCTCACTAAAGTTATCAACCCTGTATTTAATGTATCAATGTGCAACACCTTATTTTTACATATCTCTGCAAATATTTACATTTTTAAATGATTACTTCTATATTAGATGAAGCTTACTGGTAAGTGGCGCTATAGTGAGCTATTTTTAGAACAGGCATGCGGGCAACACATTTGATCATCTCGGGCTACCTGGTGCCCGCGGGCACCATGTTGGTGACC
Associated Phenotype:
Not determined