ZMP

col8a1b

Ensembl ID:

ENSDARG00000003533

ZFIN ID:

ZDB-GENE-060503-140

Description:

Novel protein similar to vertebrate collagen, type VIII, alpha 1 (COL8A1) [Source:UniProtKB/TrEMBL;A

Human Orthologue:

COL8A1

Human Description:

collagen, type VIII, alpha 1 [Source:HGNC Symbol;Acc:2215]

Mouse Orthologue:

Col8a1

Mouse Description:

collagen, type VIII, alpha 1 Gene [Source:MGI Symbol;Acc:MGI:88463]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa14358	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa14358

Status:

Available for shipment
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Availability:

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Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000019846	Nonsense	714	731	2	2

Genomic Location (Zv9):

Chromosome 22 (position 29929215)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	28697812
GRCz11	22	28647933

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

GGAGACACTGTTCAMGTTCAGTTACCATCAGAGCAAGCAGCAGGACTTTA[T/A]GCTGGTCCTTACRTCCACTCATCATTCTCTGGGTATTTGTTATATCCNNN

Long Flanking Sequence:

ATACCTGGTCCTCCTGGCCCACCTGGGCTACCTGGACCTCGTGCTCAAGCTTCATTTTTTGGGCAAATACTTCCTGAGACAGGTCCTGGGCTTGATGGGGAAAAAGGTGGTTATAAGAAAGAAAAGCCTGGAGGAGCTATTATTGGTAGGCATGGCCTAGAAATGCCTGCATTTACAGCTCAGCTGACAACCCCATTTCCCCAAGTTGGACAACCTGTTGTCTTCAACAAAATTTTGCATAATGGAAACCAAAATTACAACTTGCAAACTGGCATCTTCACATGCAAAATACCTGGAATTTACTACTTTGTCTACCATGTTAATTGCAAAGGAAACAATGTATGGGTGGGTTTATACAGAAACAATGAGCCAGTTATGTATACATATGATGAATACAAGAAAAGTTACCTGGATCAGGCATCAGGGAGTGCTGTACTGCCCTTAAACTTTGGAGACACTGTTCACGTTCAGTTACCATCAGAGCAAGCAGCAGGACTTTA[T/A]GCTGGTCCTTACGTCCACTCATCATTCTCTGGGTATTTGTTATATCCTATGTGAATATGTGAAAAAATGCATAAACAATCACATGTTTTTACATGTTTCTAGTACCACAAAGGCAATGGTTCTTAGTAGAAAATAAGACAATGCTAAATATATGATTACACGTACACATAATTTGAAAACCATTTCACAGTAACTTTAGGTATTTGTTCAACCATATGGTAAGCACTTTGTTATCACATTATTTATTTGCATATGACAGTATAATGATTGTAATTGACATTGACTGCACATCAGTGTAATATGATGTGATATTGCCATAATAAGGAATGTTCACATTGTTGGATATGCACTATTTTTCTGCTGTCTTAGTTTTTCTTTTAACCATCTCAATAAATTTCAGGAAAGTATGTGAGCACATGCAAACAGGTTATCTCATTAACTAACAGCATAAGTAAAATACATATCTAAAAACTTCCTGAAACTTTCATTTACAAAAGCTT

Associated Phenotype:

Not determined