ZMP
slx4
Ensembl ID:
ZFIN ID:
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:Q1MT56]
Human Orthologue:
SLX4
Human Description:
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:23845]
Mouse Orthologue:
Btbd12
Mouse Description:
BTB (POZ) domain containing 12 Gene [Source:MGI Symbol;Acc:MGI:106299]
Alleles
There are 7 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa45773 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa18364 | Nonsense | Available for shipment | Available now |
sa24191 | Essential Splice Site | Available for shipment | Available now |
sa29809 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa37533 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa45773
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087576 | Nonsense | 307 | 1719 | 4 | 13 |
ENSDART00000105002 | None | None | 116 | None | 2 |
ENSDART00000147719 | None | None | 208 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 27428356)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 26943801 |
GRCz11 | 22 | 26806253 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGGCGCTGGCTCTGTCCCGCTCTCTGCTGGAGCAGGAGGTGGAGAAAAAG[C/T]GAGAGCTGGAGGAGCAGAGGGAAATTCTGGCTCAGATCTCCAGCCCTCCT
Long Flanking Sequence:
AAACGTAAAGAAGAACTCTGGAAAGTGCTAAAAGAAGCCTGATATTACACAACACATGTCAGAAAATGTCAGGACAATTAAAACAAAACAGTTCAAGCCGTGCTTTGTGCTATTGGCAGCCACATTAAATATTGACCTTTGCTGGAAGCGGAAAAGTTGTGCTGTTGTTTATTATGTATTTCCTAAATTTTCTGTTAGTTTTTAATTAAAAGAGATGGATTGATTATATATTGTGCAAAAGTCTTAGGTCAAAAGGCTTAGGACTTTTGCACAGTACTGTATATAGGTGTTTGTCAATTTCTAAATATGTAAAATAAAAATTGGACTTTACCAACTTATAAATTCAATCTTTCTTCAGGCAACAAGTGGGTGGTGCTGTAAGGAGGGATGGTGTGCCTGTGAAAAAGAAGAGCAGGAGGAAAGGGCAGAAGTTGGATGAGGACACCATGATGGCGCTGGCTCTGTCCCGCTCTCTGCTGGAGCAGGAGGTGGAGAAAAAG[C/T]GAGAGCTGGAGGAGCAGAGGGAAATTCTGGCTCAGATCTCCAGCCCTCCTGCAGCCACAGCTCCTGTCCTAAAGTGGAAACCTGGAGCAGGTCAACTCAGCTCTTCATGTCAATTTCCACAAATTCCTGTGATCATTCATTCATTCATTCATCAACCCACGTGAACACAGGGAGAACATGCAAACTCGATGTTTTAGAATTTTAGATTTTAGAATGACCAAAGATTTTTGATTTTAGAATGACCAAAACAGCAATTCAGATGTTTTACATTGTGGTTGATTCACTGTTTTTTTCATTAACATTGTCCCATCGCACCTATTTTTGTCATCACATTATCTGTTAATACAAAATCACATTTCTGAAATTCTGACTTTTCTGAAACACATGCTGGAATTTTTTCAGTAAGTGTTTTTCCAAGTTTTTTATCTAACAATAGCTTGACTCAGTTGTGTACATTTATTTTTGTCATTTTCAAAATGAATGGGCATCTTGTTGTTTCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18364
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087576 | Nonsense | 411 | 1719 | 5 | 13 |
ENSDART00000105002 | None | None | 116 | None | 2 |
ENSDART00000147719 | None | None | 208 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 27429230)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 26944675 |
GRCz11 | 22 | 26807127 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YTCTTCAACCTCACGCACCCCTCTGGGACAAAAGCGCTCTTCACAGAGGA[C/T]GACAAAACTCTGTTTCAGAGTTCTACACGTCTGAGTTGAGCAGCTTCATA
Long Flanking Sequence:
TTCTGAAACACATGCTGGAATTTTTTCAGTAAGTGTTTTTCCAAGTTTTTTATCTAACAATAGCTTGACTCAGTTGTGTACATTTATTTTTGTCATTTTCAAAATGAATGGGCATCTTGTTGTTTCCATAAAGTATTTTTATGCAATAATCCCAAATGGACCTAAAAATAGGTGACTGAATGAAGGCTGAAAGTGCAAACGATCCTCAAAACACAAGCTTCCTGAAACCATATTTGTACTGTACATTAAACACAGCATATCATTCCTGTTTTCATTCAGGTAAGGGTCGTGGAAAGAGAAGGAAGGGAGCGTCTCCTGTCCAGCCGCCGTTGCTCCTCATTCAGGACCCTCAGATTGCACTGAACCGCCTACAGGAGCGGGTTTCATCTCTCCTGCTCTGCTCCAGACCACCTTCTCCTCCAACACCCACCCTGAGCCCCTCCAGCCTCCCTCTTCAACCTCACGCACCCCTCTGGGACAAAAGCGCTCTTCACAGAGGA[C/T]GACAAAACTCTGTTTCAGAGTTCTACACGTCTGAGTTGAGCAGCTTCATACAGCCATGGGTCGCACCAGTGGTGAGAAAAAATGTTCATAAAGATCAAAAATTGTAAATATAGTTTAATCAATATGTAGTTAATGCAAAAATGGGGTTTTATTAAAAAATATACAAATGTCAGGAATAGGGTTGTAACGGTATGAATTTTTTACGGTATGATAATCGTCTTAAACAATACCACGGTTTGACGGTTTCGCGGTATACGGTATGTTACAAATGTTACAAAATAATAGAACAGTGAAGCAAATTTGACTTTTTCCAAATAATATATATTTTAGTTACTATAAACAACACCGCTTACAAAGAACAAATAAAAAAATAAGAAAATAATAAATAATGTGTCAAAGTCCAAATAAATATGGTGCAAATCCTCAGTAAAAATAGATATAAATATTTACTATCCTATAAATAGTTACATAACGAAACTAGATTCAATATGGAACATCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24191
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087576 | Essential Splice Site | 643 | 1719 | 10 | 13 |
ENSDART00000105002 | None | None | 116 | None | 2 |
ENSDART00000147719 | None | None | 208 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 27433945)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 26949390 |
GRCz11 | 22 | 26811842 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTTCTGTGTATAAAATGAGATTGCAGTAGCAAATCTTGTGATAATTTTC[A/G]GGTTTGGTTTAGCTGAGCTACAGCAGCAGTGTGAGGAGTATTCTGGAAGC
Long Flanking Sequence:
AATACTCTTCATTGGCCATGTTTGTTGTTCAGGTGTACATTTCAAAGCTAGCTTCAGATTTGAGCAGTATGGTGAACAACCCCCAACTCAGTGATGTGCAGTTGCAGGTGGACAGTGGCGATGTCTTTTTTGCACACTCGTTTATGCTGTACACACGATGCCCCCTGCTGGCCAACATGGTTAGTGCATTTTTAAAACGACGCCACCAGCATCAACTGAGTGCTGACAAATAACTAAACTGTGTTCGTAGGTTCACGATTCAGGTTTTGGCGTTCAGGAGGAAGGTTTGCCTGTTGCTCGGAGGGTGCTGTTTGGTGATGTGTTGGGTGAGGCAGTGTTGGCCTTCCTGCAGTATCTTTACACAGCTCACTGTCCTCTGACGCACACTCTGATACCACATGTGCAGGAGCTTGCCGATAGGTCAGTATGACAATTTCAATAGTGTGATTAAGTTCTGTGTATAAAATGAGATTGCAGTAGCAAATCTTGTGATAATTTTC[A/G]GGTTTGGTTTAGCTGAGCTACAGCAGCAGTGTGAGGAGTATTCTGGAAGCACAGATGAAAACGCATCTAAAGACATGTTTCAAGCACCTAAACCTCATTTCAGAGACCAAGAAGAGCATAAGTTTGCAGAAAGCAACTTCTTGGAGCTTCTCCAGTCAATGTGGCAGCATGAGAACAGTGAAGAGGAGGATGAGTTTAACGAGACGTCCGGAGAGGAGAGAGTCATGGAAGAGGTGCAAGAGAGAGATGGAGAGAAAGAGGAGCGAGTGGACGAGGAAGAGCTAGATGAGATCTATGAGTTTGCAGCGACACAAAGAAAGACGGAGACAATGTTGGAAACTGCGACAGAGACTGAGGACGATGAGGGAGATGCAAATACATTCCCTGAAAATGAAATGATGAAAGATGAAGCGGTCGAAAAAGGCGAGTCAGAATCCCTCCAAGAGAAGTCTGCCGGCAGTTGCCATAGTAACAGTCGAGGCGTGGACGGGACAGAGTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa29809
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087576 | Nonsense | 754 | 1719 | 10 | 13 |
ENSDART00000105002 | None | None | 116 | None | 2 |
ENSDART00000147719 | None | None | 208 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 27434279)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 26949724 |
GRCz11 | 22 | 26812176 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATGAGATCTATGAGTTTGCAGCGACACAAAGAAAGACGGAGACAATGT[T/A]GGAAACTGCGACAGAGACTGAGGACGATGAGGGAGATGCAAATACATTCC
Long Flanking Sequence:
GTGTTGGCCTTCCTGCAGTATCTTTACACAGCTCACTGTCCTCTGACGCACACTCTGATACCACATGTGCAGGAGCTTGCCGATAGGTCAGTATGACAATTTCAATAGTGTGATTAAGTTCTGTGTATAAAATGAGATTGCAGTAGCAAATCTTGTGATAATTTTCAGGTTTGGTTTAGCTGAGCTACAGCAGCAGTGTGAGGAGTATTCTGGAAGCACAGATGAAAACGCATCTAAAGACATGTTTCAAGCACCTAAACCTCATTTCAGAGACCAAGAAGAGCATAAGTTTGCAGAAAGCAACTTCTTGGAGCTTCTCCAGTCAATGTGGCAGCATGAGAACAGTGAAGAGGAGGATGAGTTTAACGAGACGTCCGGAGAGGAGAGAGTCATGGAAGAGGTGCAAGAGAGAGATGGAGAGAAAGAGGAGCGAGTGGACGAGGAAGAGCTAGATGAGATCTATGAGTTTGCAGCGACACAAAGAAAGACGGAGACAATGT[T/A]GGAAACTGCGACAGAGACTGAGGACGATGAGGGAGATGCAAATACATTCCCTGAAAATGAAATGATGAAAGATGAAGCGGTCGAAAAAGGCGAGTCAGAATCCCTCCAAGAGAAGTCTGCCGGCAGTTGCCATAGTAACAGTCGAGGCGTGGACGGGACAGAGTCTGCCATGGTAACAAGTCCAACAGAAACCCCAAATCTGGAGACTGCTAGAGTTTGTTTGATGCCAGATTTAGATGCCGGCACACATGAAAACAAAGACCCAGATGCCAGCCTTGACAAGAGCTATGACCGTTTATTCTCCCAGTCTATAGGGGAATACAGGGAACCGTCACAGGCACCAGCATCCTGCTCTCAGAAACAACATTACAAGGCTTCACACACACTACAACGAAACACACCTGCCCCATTTCGCCCTTCATGTGTCAGTGAGGTGATTGACCTGTCAGTAAGCCCTCCTCTAAGCTCAGGTATGTCAGGTGAGACTTCCTTTCCAATGC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa37533
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000087576 | Nonsense | 1075 | 1719 | 10 | 13 |
ENSDART00000105002 | None | None | 116 | None | 2 |
ENSDART00000147719 | None | None | 208 | None | 3 |
Genomic Location (Zv9):
Chromosome 22 (position 27435243)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 22 | 26950688 |
GRCz11 | 22 | 26813140 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTGAAGTTTCCTGGCTGATTCCAGCTACTCCGGTACCATCCACACGATG[T/A]AGCTCTGCCCAGACATGCGTCACTATGCGCCGAACTCAGCTATTCCCCAA
Long Flanking Sequence:
AGCTCAGGTATGTCAGGTGAGACTTCCTTTCCAATGCCTGGTGTGTCTCCGGTCCCATATAAGGATGAAGATACATGCTTAAGAAAAGATATTCTAAGCTGCCCAGGAATAGAAAACCCTCCTTCCCCTCCAAAATCACATAGTAAACAAGTTGAGCTCATTGTACTTTCAGATGACTCTAATGAGGGAATGGATGTGGATGGCAAACACAATACTAGTACCACTAAATGTGCTTTAACCCCTAAGTCTCCTATCAAATCTCTACCAGAGCCTCCTCACATAGTCAAAAGCTGTGCTCTTCAAGTTAAACCCACAGAAACTGGACCCCAAGGCCATGCTGGTAAACATGTGAACACTTCAAAGCAGGTGACAATTGATACAGAAACCATGTCTGACTCTTCAGAGCGCTGTAGCCCTGGGGTTGCAAATGAAAGTGTGTTTGATGGCTCTGCTGAAGTTTCCTGGCTGATTCCAGCTACTCCGGTACCATCCACACGATG[T/A]AGCTCTGCCCAGACATGCGTCACTATGCGCCGAACTCAGCTATTCCCCAAACCTTGCTCTGCCTCATCTTCTTCTTCATCATCTTCTGTGTTGGACAGTTTGAAACCTGCCACCTTTGCTTCTTCAAGCAGCAAATGCTCTAAAGAGAAGCAAGCACCCTTGTCTGAACTCCAATCAGGTCAGAGCTCCTCTAAAGAACATACTAGCACTGAAATGGATCACTCTCCAGGTTTCCAGAGACCACTTCAACATCTTAGATTGTCTCAGGTTGCTTCTGATGTCTCTCGTGCTAGCACCATCATGGGACATCTAGCCCAGGGTGTCCCACAACCCTCAAGTAGCACTCCTGTCCATTCAGTTGGTTCCTTACAACGTAAGATCCTGTTTGACTCTCCAGTGGATAGGGAATATGAGGTTCCCCTCAGGGATAGCAGAGGCCTCTCTAGTTCATTTAACTGTCAGAAGAAAGTAGAATCTTTACAACTAAATTCTCCTTCCCC
Associated Phenotype:
Not determined