ZMP

si:dkey-217m5.5

Ensembl ID:

ENSDARG00000008060

ZFIN ID:

ZDB-GENE-041014-317

Description:

Novel protein similar to human and mouse scavenger receptor class A, member 3 (SCARA3) [Source:UniPr

Human Orthologue:

SCARA3

Human Description:

scavenger receptor class A, member 3 [Source:HGNC Symbol;Acc:19000]

Mouse Orthologue:

Scara3

Mouse Description:

scavenger receptor class A, member 3 Gene [Source:MGI Symbol;Acc:MGI:2444418]

Alleles

There are 5 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12458	Nonsense	Available for shipment	Available now
sa29429	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa12458

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
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Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000002481	Nonsense	137	586	6	7
ENSDART00000146683	Nonsense	129	578	4	5

Genomic Location (Zv9):

Chromosome 20 (position 39322500)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	39394912
GRCz11	20	39297791

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TGAAGAAGGAGTTWGAAGAAATCCAGAAGACGATACTCAGTCAAGAGCAA[C/T]AGATGAATGAGGCGACCCAAWCCCAGCAAAGTCTTACACAATCCAGCAAA

Long Flanking Sequence:

TACCCCAGACATGTTCAATAATGTTCATGTCTGGTGACTGGGCTTGCCAATCCTGGAGCACCTTGACCTTCTTTGCTTTCAGGAACTTTGATATGGAGGCTGAAGAATGAGAAGGAGCAATATCCTGCTAAAGAATTTGCCCTCTCCTTTGGTTCTCATAACGTTCCTTCTGTTAAAAATAGGCCTGCTAGATTTATGAAATGTGGGAATCAAATCTCTCGGTTCACTTCCTGTGGTTAATGAACCCCTTAGAGAATAAAATCTCAGGAGGATTTATATATTATAGAAATAATGACCTAAGCAACAGCTGTGCACACACTTTTTAAACTGTATTTTTTGTCAGAGATGCATGATAATCACAATTTGCTTGTTCTTCTGCAGATATCAGAACAGCAAGCAACTATTCCACTTGCTTAGACGTGGCACAGTTCCAAGAGGAGATTGCCAGACTGAAGAAGGAGTTTGAAGAAATCCAGAAGACGATACTCAGTCAAGAGCAA[C/T]AGATGAATGAGGCGACCCAATCCCAGCAAAGTCTTACACAATCCAGCAAAAGAATGGCAAGAGACTTCCAGGCCTTAGGAATGATCATCAAGAGTGTGAACCAGTCTCTGAGCCAGTACCTAAATCAAGTATCTGGCTGGCAGGTTGTAATTAATGAAACCGATCATGGGATGAAAACCCTTGTTGAGGATCAACATGATTTGAAGGCCACAGTGCAGCAAGTCAACACAACTGTCGCCCTTAGTGGATTGTGGATAGGTGCTCTTCAGAGAAAAGCAGAAGAGGAGACCTTGGTGCTTCAAAAAATAACAGCAGACTGGCAGAATTACAGCAGAGTTTTAAGCACCCTGAAGACCAATACAAGTATAACCATGCAGAACCTGAGGGTTGTTCAAAATAGCATCTCTGCCACTCAGCAACGTATCAGTACGAGTTCAGAGATGGTGCATGACCTCACTCTGCAAGTCATGAACCTTCAGATGCAACTAGACAATGTTTCG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa29429

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000002481	Nonsense	323	586	6	7
ENSDART00000146683	Nonsense	315	578	4	5

Genomic Location (Zv9):

Chromosome 20 (position 39323060)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	20	39395472
GRCz11	20	39298351

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GACGAGCACGAGGAGAACATGCATGACCACCAGTACCACGCCAAGTATTA[T/A]GAGAACCGTACTGGGGAGCGATTTGTCACTTTGGATGCAAGAATGGACTC

Long Flanking Sequence:

AGAGACTTCCAGGCCTTAGGAATGATCATCAAGAGTGTGAACCAGTCTCTGAGCCAGTACCTAAATCAAGTATCTGGCTGGCAGGTTGTAATTAATGAAACCGATCATGGGATGAAAACCCTTGTTGAGGATCAACATGATTTGAAGGCCACAGTGCAGCAAGTCAACACAACTGTCGCCCTTAGTGGATTGTGGATAGGTGCTCTTCAGAGAAAAGCAGAAGAGGAGACCTTGGTGCTTCAAAAAATAACAGCAGACTGGCAGAATTACAGCAGAGTTTTAAGCACCCTGAAGACCAATACAAGTATAACCATGCAGAACCTGAGGGTTGTTCAAAATAGCATCTCTGCCACTCAGCAACGTATCAGTACGAGTTCAGAGATGGTGCATGACCTCACTCTGCAAGTCATGAACCTTCAGATGCAACTAGACAATGTTTCGTCTTACATTGACGAGCACGAGGAGAACATGCATGACCACCAGTACCACGCCAAGTATTA[T/A]GAGAACCGTACTGGGGAGCGATTTGTCACTTTGGATGCAAGAATGGACTCCATTGAACATGAGATTGACACAATCTCTTCCAGCATTAATGCAACCGTCAACCATGTTCAAAGCATGTACAAATACATCAACATGGAGAGCTCATCTTGCCAATCCAGACTGGGCAGTCACACGGAGGATTTGCAGAACCTAAACAACACAGTCTTGCTTCTTCTTCACCTAGCTGATACTCTAAGATTGCAGCACATGATGCTGAATGAACGTCTCGAAAATGATGTAAGGAGTCTCACTGTGGTGACGGAGGAGATGAAGCTGGTAGACACCAGTCATGCAGAACTGATCCAAAACTTCACAATTCTTAAAGGTGGTTATTAACCTGTAGTCCAGAGTTTCTCAAATCTTACCATGTAGAGCAGGGATTTCAAAATAAGTTCCTGGAGAGACCTGCAAAGTTTAGTTCCAATCCTGCTTTAACACACTTACTTGTAGGTTTCAAACAA

Associated Phenotype:

Not determined