ZMP
trmt11
Ensembl ID:
ZFIN ID:
Description:
tRNA guanosine-2'-O-methyltransferase TRM11 homolog [Source:RefSeq peptide;Acc:NP_956510]
Human Orthologue:
TRMT11
Human Description:
tRNA methyltransferase 11 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21080]
Mouse Orthologue:
Trmt11
Mouse Description:
tRNA methyltransferase 11 homolog (S. cerevisiae) Gene [Source:MGI Symbol;Acc:MGI:1920931]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa42790 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2875 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa42790
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000102552 | Nonsense | 115 | 466 | 5 | 13 |
| ENSDART00000125484 | Nonsense | 115 | 384 | 5 | 12 |
The following transcripts of ENSDARG00000040033 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 42713058)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 40096508 |
| GRCz11 | 16 | 40046540 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCACAGGCTCCATATCTGCAGCAAAACTCAACCTATAAGATCAATGTCTA[C/A]ACTTTTAACAAAACATTAGAATTTAAGGACAGAATCAAAAAAATCGATGT
Long Flanking Sequence:
TTAACTCTAGGCCATTTTGAGGGATGTAAATAATAACAATGGTCCTAACATATTTCCTGTTAAACATATTCAATTTCCTTCGCTTCTGAGAATCCAAAACGATCTACATATTAATCAAAAATGTTATGATTGCTGTTATAATGCTAAGTTATGATTGAATTGCCTCTTGTTGCAATTATGCAATAGTTTGACAACAAGCAGGAAATGTTCATGGGCCAATGACATCACTACACTAAAATGGTCTACTATAATTGATGAAGAGCTTTATTTATGTGTTGTTTAATATTTGTTTTAAGGTCTGCTTTTGAACTGTGGGGTCATGGAAAGACGACAGAGGAGCTTCGGAGGTCGTTATTGGAGTATCCATCAGAAAACATGGTTTGTTCAAGTTCTTCTATTAATAAAAGAATAAAGTGTATCTATCAATGAACTGTCTCTTGTATTAACTCTTCACAGGCTCCATATCTGCAGCAAAACTCAACCTATAAGATCAATGTCTA[C/A]ACTTTTAACAAAACATTAGAATTTAAGGACAGAATCAAAAAAATCGATGTAAGTATTTTGCTGTATTTTTCATGTTTTACGTTTATCGTATACATTTTGTGGCTTTTGTGATGTGCAGTCAATAATTATCCATTTACAGTCAGTTTAATTGTTAACATTTACTCACTACAAACTTAATTTTGATGCTCCTTTTAGACACTCTCTTAGACTCGCATACTAACATAAAACTTTGCAAGGCAATAAATTGTTAGTGTATTTTTTAATCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCCACCTATCCATCTATCCATCTATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCATCCCAGGCTCTAGACTTCTTACCATTTGAAGGAACAGTTAACCTCAAGGACCCAGAACATATTTTCTGCTTGCTAGAGGATTATGGAACTGATCCTAATGAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2875
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000102552 | Nonsense | 285 | 466 | 9 | 13 |
| ENSDART00000125484 | Nonsense | 285 | 384 | 9 | 12 |
The following transcripts of ENSDARG00000040033 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 16 (position 42719259)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 16 | 40102709 |
| GRCz11 | 16 | 40052741 |
KASP Assay ID:
554-3319.1 (used for ordering genotyping assays)
KASP Sequence:
GATGAGAACATTCGAGCAAACTTGCGTCAGTATGGGGCTGAAAATCTCTA[T/A]GTGGACGTCATGGTGTCTGATGCCTCCAAACTGGTTTGGAGACGAAATGC
Long Flanking Sequence:
CTCCTGCTGTGATGTTGAAGTTTTATCTTCCAAATTTTAAAACCTGCCAAGGACCATATTGTTTTTATTTTTGTTTTGTTTATGTCCTGACAGAAAACCATGTTATTCATAGGGTGTTCTAACGTTATGACTGTACATGTAACATGTGTAAATGTGTTCTCTAATGTTTTGTCTTTAATACCCACTGTACAGTATGTGTTTCATTTTATTTCTCATGATTTTTTTTTTCATTTTTCAGGTAGTCTTTTGGTAGCATGTTCACACTTTGGGGCATATGTATGTGGGACAGACATTGATTATAACACTATCCATGGAATAGGTATATTTTCTTTAAACCGTCACTTTAAATTTTTTACGAGTCTTTTACACATTTGGAATGAGTCCACACCTGTACTGTTTTAAACTGTTGTAGGAAAGGCCAGCAGGAAGAATCAAAAATGGAGAGGACCAGATGAGAACATTCGAGCAAACTTGCGTCAGTATGGGGCTGAAAATCTCTA[T/A]GTGGACGTCATGGTGTCTGATGCCTCCAAACTGGTTTGGAGACGAAATGCCCAGTTTGATGCCATTATTACAGACCGTACGTTACTTTAAACTCACAAAAATTATGCTTTTAATATGTTAAAGTACCAGATTGAACCAGCTGAAAACTGGTTACGATGTTTAAAAATGCCAGTTGAAGCTGTATTTTCAGTCACATGGAAAAACTACTTGTAAATATCTTTCAGTTAAGCCTATTGATGCAGAATGACACGCTTCACCTTTAAAGTCACATTTGATTGTGTTTTTTGTGGTTGTGAAGCTTTAAGTGTTTTTATTTTTTCCCCGTGCAGCTCCATATGGCATTCGTGAGTCCACACGGAGAACAGGATCTCATAAAGATATCATCAAACCTCCTGAGGATTTGTAAGCCTATCACTTTTATCCACCTGCATTTTTAATGGATCCACATGAAACACTCTTTAGATAAAAGCTAGTCATCCAGTAAGCCTGCTGTGACCACT
Associated Phenotype:
Not determined