ZMP
sgcg
Ensembl ID:
ZFIN ID:
Description:
sarcoglycan, gamma (sgcg), mRNA [Source:RefSeq DNA;Acc:NM_001003748]
Human Orthologue:
SGCG
Human Description:
sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) [Source:HGNC Symbol;Acc:10809]
Mouse Orthologue:
Sgcg
Mouse Description:
sarcoglycan, gamma (dystrophin-associated glycoprotein) Gene [Source:MGI Symbol;Acc:MGI:1346524]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa28409 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa42495 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa28409
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000055555 | Nonsense | 70 | 292 | 3 | 10 |
| ENSDART00000144381 | Nonsense | 70 | 292 | 3 | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 9473645)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 9356407 |
| GRCz11 | 15 | 9332478 |
KASP Assay ID:
2260-8177.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGAGAAATGCACTATTGGTGGTATTATTTTTGTAGGAAGGCATGGGGTA[C/A]TTGCAAGTCCACGAAGATGGACTAAGACTAGAGGGAGAGTCAGACTTTCT
Long Flanking Sequence:
AACTCAGTATAGCTTAGGATTGTTTATATTTCTATAGTTATTGTATTACCAAACCAACTGTTGAGTTGCTTTAACATATTATTTCGTAGCTGTAAAAGTTGTGAGTTTATATTCAATCACTCACTGTCAAAATCTTGTTTGGCAGATGGTGCGTGAGCAGTATGTCACCACCACAGAGGAATCTGGAGTTCTGTCTCCAGTCTCGGAGTACATTTACATGATCGGCATCTACGGCTGGAGGAAGCGCTGCCTCTATCTGTTTGTTCTGCTTCTACTGATCATCCTGGTTGTCAACTTTGCCCTTACCATCTGGATCTTGCGAGTAATGTGGTTCAATGCGGTGAGAGGACTTCACCTAGATCACATATTTTATGAAAACATGAAACTGTATTTAGATTCTACCCTCAGATTTTTTATCACCGGTTGATGTTGCATGAAGTCACACTCATGTTGAGAAATGCACTATTGGTGGTATTATTTTTGTAGGAAGGCATGGGGTA[C/A]TTGCAAGTCCACGAAGATGGACTAAGACTAGAGGGAGAGTCAGACTTTCTGTTCCCTGTTTACGCCCAGGAAATCGACTCCAGAGAGGTAAGAGGTACTTACTGTAAGATAATACTTTAGTAACAGTCAGAATTATTAGCCCCCCTTTTATTTATTTATTTATTTATTTATTTTAAATATTTCCCAAATTATGTTTAACAGAGCAAGGGAATTTACACAGTATGTCTGGTATATATTTTTTTCTTCTGGAGAAAGTCTTACTTGTTTTATTTCGGCTAGAATAAAAGCAGTTTTTAATTTTTTAAACACCATTTTATGGACAAAATTAATAGCTCCTTTAAGCAGTATTTTTTTCTTATAGTCCACAGAACTAACCATCATTAAACAATAACTTGCCTAATTACCTTAACCTGCCTAGTTGACCTAATTAACCTAGTTAAGCTTTTAAGTGTCACTTTAAGCTGTATTGAAGTGTCTTGAAAAATATCCAGTCAAGTATT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa42495
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000055555 | Nonsense | 265 | 292 | 8 | 10 |
| ENSDART00000144381 | Nonsense | 265 | 292 | 8 | 8 |
Genomic Location (Zv9):
Chromosome 15 (position 9488154)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 9370916 |
| GRCz11 | 15 | 9346987 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GTGGGAGAAGCCGGAACTTCAGGAGACTCTCAGGGAATGTACAACATGTA[T/A]GAGGTTTGCGTTTGCCCCAGTGGGAAACTCTTTTTCTCCACGGCCGGAGT
Long Flanking Sequence:
TGATTAGGGTTGGAGCTAAAATCTGCTGGACACCGGCCCTCCAGGAACAATTTTGGTGATCCCTGCTTTAGGCCTATCTAAAATAAAAAAGGCAAATTTGAACTCTTTCCAACAGGGAAAACCACCATCAATTAAAAATGCATGATTATATGGTGTCATGGCTTTGCAATTAAAAAATGTGATTATGATTGGGGTCAATGGGGCAAAAACAGCCACGAAAATGCTGACAGCGTAGTCAAAACAATAAACAAGGATTAATTACTCACCCTAGTGTTGTTCCAAGCTGTTGAAAAGGTGTATCTAATAAAGTGGTCAGTGACTGCACATATTGCTATTTTATAATAGAGTTACTTCCATTAATGCATTAATGAATTGCTTCAATCTTGTGGTCTCTGTTGTATGCTCCAGTTGATTCTAGATGCAGAAACCGTCCGTCTGCCGAAATTACCGGTGGGAGAAGCCGGAACTTCAGGAGACTCTCAGGGAATGTACAACATGTA[T/A]GAGGTTTGCGTTTGCCCCAGTGGGAAACTCTTTTTCTCCACGGCCGGAGTCTCCTCGACCTGCAGCGAAAGCCAGGACTGCTGAATGAGCTTCTGATTGAACATATACACTAGACACTAATTTGCCCTGTAACAAGGACTTGATGTGTTCTTACATTGGGTTAGGGTAAGGTAAAACAATAATACAAATGGTAATTTAACCCTATGTTACATAAATAGAAGCCTGCTTTAACCAGGGAATAAACATAAAAGCATTAAAGGGATAATTCACCCAAAAAATGAACCTTCTGTCATGATTTACACTACCTGACAAAAGTATTGTATTAAATAATAACTAACAAATAATGACTTCTAGTTGATCATTTTGTATCAGAAGTGGCTTATATGAAAGGCAAAGGCCTCTTGATTATGCTTATTATACTAAAATAAAATATGACATTAATAAAGTCATCTGGAACGGCAAAGTTAGCGTTCTTGCAGGACTCCCAGAGTTCATCAAGA
Associated Phenotype:
Not determined