ZMP
prpf8
Ensembl ID:
ZFIN ID:
Description:
pre-mRNA processing factor 8 [Source:RefSeq peptide;Acc:NP_957270]
Human Orthologue:
PRPF8
Human Description:
PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:17340]
Mouse Orthologue:
Prpf8
Mouse Description:
pre-mRNA processing factor 8 Gene [Source:MGI Symbol;Acc:MGI:2179381]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2823 | Nonsense | F2 line generated | Not yet available |
| sa1289 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa2823
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026434 | Nonsense | 1400 | 2342 | 24 | 41 |
| ENSDART00000134601 | Nonsense | 1400 | 2342 | 25 | 42 |
Genomic Location (Zv9):
Chromosome 15 (position 27603302)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 28321542 |
| GRCz11 | 15 | 28254418 |
KASP Assay ID:
554-3379.1 (used for ordering genotyping assays)
KASP Sequence:
AGAGTGAGTTCATTGATTCTCAGAGAGTTTGGGCTGAATATGCCCTCAAG[C/T]GACAGGAGGCCATTGCTCAGAACAGGTACTGTCCTCTAAACCAAACCTTA
Long Flanking Sequence:
CAGCATGTAGCACCCAAAGAAGATGATATCACTAAATACTCCAGCCTTTTCTCTTGAAATTCATAAGAAGGTTTTTTGTTTGCTGCTTGTCATAAGGTACCTAATTCATGTTTGAATTTCTAACTGTTGAATTGCTTTCTGGGACACTGATGGTAATGATACTGAAACTGGCCAAATCAAATAGGTTATTTTGCAATCAGTGACATGCTTTTTTGGGTGACTGGTGCCAAGAAATCTAGATGATGGATTGTTTTTTTGACCCAAAAAAGGTTAAGAGCCGTTAAGGAAATTGATTTGCAACTACAGATTCAGGCAATTTATGTATAGTTGTTCTGTGTGTGCTCAGGTGGTCCAAACAGACCGATGTGGGTATCACTCATTTCCGCTCTGGTATGAGTCATGAGGAGGATCAGCTTATTCCTAATCTGTACCGCTACATCCAGCCATGGGAGAGTGAGTTCATTGATTCTCAGAGAGTTTGGGCTGAATATGCCCTCAAG[C/T]GACAGGAGGCCATTGCTCAGAACAGGTACTGTCCTCTAAACCAAACCTTAATCTAGATTATGGTGATGTTTTTGGTATAATTATATAACTTTGATGATACTCAGACGTTTGACACTGGAGGATTTGGAGGACTCCTGGGACAGAGGTATTCCACGTATCAACACCCTCTTCCAGAAGGACAGACATACTCTTGCTTATGATAAGGGCTGGAGAGTCAGAACAGACTTCAAGCAATACCAGGTACGAGTCTTTCCTTCTCGTAAAAGTGATTTGCGTGGTAAAGGCAGTGGCACTTCAGATACATTGGTAGTGTTCATTTTAAATATTTTTTTAATGTTTCAGGTGCTGAAGCAAAATCCATTCTGGTGGACTCACCAAAGGCATGATGGAAAACTATGGAATTTGAACAATTACCGAACAGACATGATCCAGGCACTTGGAGGGGTTGAAGGCATTCTTGAGCACACACTGTTCAAGGGTACCTACTTCCCTACCTGGGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1289
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000026434 | Nonsense | 2042 | 2342 | 36 | 41 |
| ENSDART00000134601 | Nonsense | 2042 | 2342 | 37 | 42 |
Genomic Location (Zv9):
Chromosome 15 (position 27600100)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 28318340 |
| GRCz11 | 15 | 28251216 |
KASP Assay ID:
554-1204.1 (used for ordering genotyping assays)
KASP Sequence:
CTCCATCCCAGCAGAGACAGCAGATCGCTGAGATTGAGAAGCAGACCAAA[G/T]AGCAGTCTCAGCTTACGGCCACTCAGACTCGCACAGTCAACAAACACGGA
Long Flanking Sequence:
AAGCTATTCATTAAATTAAATAATCATTGAAGCAAAATTTTGTTGTTTCTGAGAGTTCCACCACTTATGCTACGATGTCTAAAACTAAAATCTGTTTTTGTTGCCTAGGCATTCTCTCGTTTGATTTTGATCCTGAGAGCGCTTCATGTCAACAATGATCGTGCCAAAGTTATTCTGAAACCTGACAAGACCACCATTACCGAGCCCCACCACATCTGGCCCACTCTGACGGATGAGGAGTGGATCAAAGTGGAGGTGCAGCTCAAAGATCTCATCCTGGCTGACTATGGCAAGAAGAACAAGTAAGAAATACAGATTTCCAAGTGCATTCAAAAATATATACTTTGGGATGTTCAAGATTGTAAATTCTCAATCTTCTCCACAGTGTGAATGTGGCATCTTTGACTCAGTCTGAAATCAGGGACATCATCCTGGGAATGGAAATCTCTGCTCCATCCCAGCAGAGACAGCAGATCGCTGAGATTGAGAAGCAGACCAAA[G/T]AGCAGTCTCAGCTTACGGCCACTCAGACTCGCACAGTCAACAAACACGGAGATGAGATCATCACCTCCACCACCAGCAACTACGAGACGCAGACCTTCTCTTCCAAAACTGAATGGAGAGTAAGGTACGGAAATGTTTCTTGTCTTTTTGGTCATTAAAGCACAGCTAAAGTTCGCTGTTAAACCGTTTTCTTCATCTCACAGGGCGATCTCTGCTGCAAACTTGCACTTGCGTACCAACCACATCTATGTGTCATCGGATGACATCAAAGAAACGGGCTACACTTACATCCTGCCCAAGAACGTTCTGAAGAAGTTCATCTGCATCTCAGATCTGCGTGCTCAGGTTAGATTAACAGTCTAATTAAAATGTCTTCTCTTATTTTTGCTTAGAATCATTTCAGGGCTGTCATGATATCAGATTTAAACAGTATATGATCTGTGGGAGTCTTGAAAAAATTTTATGAGTAAAACAAATTAGACTTGGAGGAGAAAGTTTCT
Associated Phenotype:
Not determined