ZMP
srbd1
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate S1 RNA binding domain 1 (SRBD1) [Source:UniProtKB/TrEMBL;Acc:B8A
Human Orthologue:
SRBD1
Human Description:
S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:25521]
Mouse Orthologue:
Srbd1
Mouse Description:
S1 RNA binding domain 1 Gene [Source:MGI Symbol;Acc:MGI:1925836]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa28071 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa28071
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000110035 | Essential Splice Site | 77 | 175 | 3 | 3 |
| ENSDART00000138228 | None | None | 159 | None | 2 |
Genomic Location (Zv9):
Chromosome 13 (position 9594101)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 9896430 |
| GRCz11 | 13 | 10028905 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACACACTATTCCCAGACCACTTTTGCCCTAATTATTTTTCTTTTGTTTTT[G/T]TTCAAAAAGATTTTGAGCAGGCAGACTTCAAGCGAGAAGTTGTGTCCATG
Long Flanking Sequence:
GCACCTCCCAAAGAAAGTCGCCCAAAAACACAGGCGAAATGGACTTGGAAAGAAGTGGTTTGAGAGGCCTGGTAATTCTATTTGTTTTATACTATTAGCCGGAGCTTGTTTCTTATGTCTAGCTTTGGAGTTCTTGGATCAGTTTGCAATAGGGTGCTTAAGACTCAAAGTCTTAGTCATTGGAAAAGACAAAATCTGTTGAAACATTCTCTGTTTCTTTCTTTGAGTTTTTTGGCCCGTTTGCATTTTATTTAGTCCGATCACAAGTGGATGACACTGATACAATATTCTGAAATACATTCATTTGGATTGCTTTTGTAGGGTAAACAGATATGAAGTGCCCTATCATATACCTGGCGCAATAAGGTGCAAGACGTGTTTGGCGTCATTTGTTGCTATCCATTGAATGCATGTGGATACCAGGTGGAAACAGTAATGCTTTAGATGACCACACACTATTCCCAGACCACTTTTGCCCTAATTATTTTTCTTTTGTTTTT[G/T]TTCAAAAAGATTTTGAGCAGGCAGACTTCAAGCGAGAAGTTGTGTCCATGAATGACCTGCATGATGGCATGGTGCTGACGGGCCGTGTTACAAACACTGCATTATTTGGAGCCTTCGTAGACATTGGAGTGGGACGTTCTGGTCTGATTCCAAAACGCTTCATCACTCCGGAGAAACTTCCTGTTGACCAGAGACGAAGAAGCCTAGCTCTCGGTCCAGGTGAGCGGGTAGAGGTACGGGTCATGAATGTGGATATTCAGAGGAATCGGATCACTCTGGACCTCATTAGGGTTCTTAGATAACTGTTAGTTAAGGGTTTAAATGTAGTTATTATTACATACATATTGTATTTGTTTATGGAACATTATGCTTTTCCAGTGTTTGACTGTGGAATGTGCTGAATTAAAACATTTTTTATTTACACTTTAATGCAAATACAAGATCAGTGTGTAAGAAGTAATTGTAGGTTAATATCATGTTTCTCTTCATATTTGGTGCCA
Associated Phenotype:
Not determined