ZMP
rpa1
Ensembl ID:
ZFIN ID:
Description:
Replication protein A 70 kDa DNA-binding subunit [Source:UniProtKB/Swiss-Prot;Acc:Q6NY74]
Human Orthologue:
RPA1
Human Description:
replication protein A1, 70kDa [Source:HGNC Symbol;Acc:10289]
Mouse Orthologue:
Rpa1
Mouse Description:
replication protein A1 Gene [Source:MGI Symbol;Acc:MGI:1915525]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2803 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa2803
Status:
F2 line generated
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For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000032880 | Essential Splice Site | 502 | 601 | 14 | 17 |
Genomic Location (Zv9):
Chromosome 15 (position 25844885)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 15 | 26575668 |
| GRCz11 | 15 | 26508544 |
KASP Assay ID:
554-2948.1 (used for ordering genotyping assays)
KASP Sequence:
GAAATGCGACAAAGAGTTCCCTGACTTCAAATATCGYCTCATGCTCTCGG[T/C]AAGGGGCTTGCTGTTGGATTTTTCTGCCCTTTCTAAAATAACACATCAAG
Long Flanking Sequence:
ATTATGTGTATGCATATTCTCTGCTTTGCATATCTCACTTAAATGAATATAGGCACATTTGTTTGCCTCTCTGCTTGGCCCATTTTGCAAGCAGGCTGCATTTAATTTTTCTTTTTTTAAACTCTATACATCATGCTATGTAGGTTCTGCAGTTACCTCATAAGAACTTAAAAGATAGAAGTGGTTTTTAGGATGTATTGTACTGCATTCTGTTACTGTGTTTTTACTATGATCAGTTACAGTGTGTATTGTGGATATAGTGTGTCCTTTTAAGCTTTGAAATCAAGTATTTTTTGTGACTCAAACTCTCTTCTCTTTCCAGGCTGATTATTTCTCTTGCATCGCAACCATAGTCTACATCCGCAAAGAGAACTGCTTGTATCAGGCCTGTCCCAGTAAAGACTGCAATAAGAAGGTGGTGGACCAGCAGAATGGCATGTTCCGCTGTGAGAAATGCGACAAAGAGTTCCCTGACTTCAAATATCGTCTCATGCTCTCGG[T/C]AAGGGGCTTGCTGTTGGATTTTTCTGCCCTTTCTAAAATAACACATCAAGCTTCTGAAGTCGCATGTTCTCTGGTTATCCTAAAATAAATATCTCTGCCATCCTTTTTTGCTTTCAGAAAATAATCATTCCTAAAATGAGTTTAATTTTGCTTATTTTATTTATTTATGCTCTAAATACATTGTTCGTTTAAGGCCTCTTCGTTTCGGCTTTGCTGTAAATCAGCCAAGGCTGTGTTTCATTAATTGCTTCTTTTTGTATTTAAAGCTGCATCTCAAATTCCAGGAATGGGCAAATAAAGCCAATACATCCTTGTTGCTTGTCTGCGGACAAAATGTTTTTAAAATAATAGATTTATGTTTTTACTAAGTTTTGATTTAATTTAGCTTCAGCCTCCAGACATGATACATATTTTTTTTTTATTCCACACAGTACATTGCTGTGGTCACACACAGAACAAGAAGTACCACGATGCATCACATCCTTAACATTGTGTTCTGT
Associated Phenotype:
Not determined