ZMP
phf20a
Ensembl ID:
ZFIN ID:
Description:
Novel protein similar to vertebrate PHD finger protein 20 (PHF20) [Source:UniProtKB/TrEMBL;Acc:A8HAK
Human Orthologue:
PHF20
Human Description:
PHD finger protein 20 [Source:HGNC Symbol;Acc:16098]
Mouse Orthologue:
Phf20
Mouse Description:
PHD finger protein 20 Gene [Source:MGI Symbol;Acc:MGI:2444148]
Alleles
There are 8 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa31829 | Nonsense | Available for shipment | Available now |
| sa12229 | Nonsense | Available for shipment | Available now |
| sa27790 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa1493 | Nonsense | Available for shipment | Available now |
| sa45429 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa21909 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa31829
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000018743 | Nonsense | 103 | 951 | 3 | 20 |
| ENSDART00000123263 | Nonsense | 103 | 932 | 4 | 17 |
| ENSDART00000126488 | Nonsense | 103 | 544 | 4 | 11 |
| ENSDART00000127817 | None | None | 380 | None | 7 |
Genomic Location (Zv9):
Chromosome 11 (position 25982416)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 24811241 |
| GRCz11 | 11 | 25048857 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCATGTGAATGACAGAGTTCTTGCCAGTTGGTCCGACTGTCGATTTTA[T/A]CCGGCAAAAGTTCTGGCTGTCAATAAAGATGGTAATAAAATTAAAACCAA
Long Flanking Sequence:
CCTTTTAATATTCTGATTTAGTGAATTATTTATTTATTTCATTATTATTTGGTCTAAAAAAGTATGTTTAGTTTGAAATATAAATTCTGTCATTTATAAATGACCTAACTTCTACATTTTATTATCATAATGCATCCTTCCTGAACAACAGTATTAAAGTCTTACTAACCTCAAACCTCTGAACAGTGGTGTAGAATATCACATAACCTCTCCATTGGATGTCTTTATATTCATATAAGATATGTGATTCACCAGCATGCAGAAAAATAAGATCTCTGCAGACCCTTATAAATATGTACACCCAGAGGAAACCCACATGAACACAGGAAAAACATGCAAACTCCACACAGAAATGCCAATTGACCTAGCCGGGACAGTGCTAACCACCGAGCCACCGTACCACCAAAACCCTAATTCTAATTGTTTGCCTTTGTCTTTTTTTTGCAGGGATTTCATGTGAATGACAGAGTTCTTGCCAGTTGGTCCGACTGTCGATTTTA[T/A]CCGGCAAAAGTTCTGGCTGTCAATAAAGATGGTAATAAAATTAAAACCAAAGTGTTATTAAACATTTATATGTGACTCTGGACAACAAAACCAGATTTATGTTGTACATGTATATTTTTTTGGAAAAGCCAAAAATTTTAAATTACTGATTTTTCTTTTATGACAAAAATGTTGAAATATTATGTAAAGATCAAGTTACATGGAGATTTCTTTGAGAATTTTGGACTATACGTATATCAAAACTCTTGATTTATAATGTGCTTTGCTAAGCCCTTTAATTAGAAAGAAAATGAGGGAATGTTTTCAGTATTTATTTATTTTTTAAATCAAAGATTCCATATTTTCAAATAGTTGCATCTCCGCCATATTCAACCCACGCTCATTCTGAAAATGTACCGCTATATACATTTCTGCAGTACGCCAAATACATCCCAGGAGATACTTTTTTTGCAGTTTTGTTTAAGTGAATCTACCAGAGGCCGCTGTGTATGCTTTTTGAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12229
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000018743 | Nonsense | 121 | 951 | 4 | 20 |
| ENSDART00000123263 | Nonsense | 121 | 932 | 5 | 17 |
| ENSDART00000126488 | Nonsense | 121 | 544 | 5 | 11 |
| ENSDART00000127817 | None | None | 380 | None | 7 |
Genomic Location (Zv9):
Chromosome 11 (position 25983722)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 24812547 |
| GRCz11 | 11 | 25050163 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCAYTCTAATGACAAAATGATCYTCCAGCATCYTACACAGTAAAGTTCTA[C/A]GATGGTGTCGTCCAGACAGTCAARGGAATCCATGTGAAGCCCTTCACCAA
Long Flanking Sequence:
ATCTTACCTGCTTTCTGAAACCGTTGTTCACCGGACTCAAACCCAGATGTCGTGGTCAACTCCTCTCTGCATCTTAAGTTCACCGATGTACATGACGAGCTAACTAGACAAACTGGTTAAAGCGGGATAGCTGTCCATATGGAGGTAAGCGGTCAGCTAGTAATCGCGAAAAGGAAAGATGTCATACTGCCCTGTAGCATTCGTTTTAAAGATGAAATGCAGCCATATGTACTTCTGGCTACATAATTCGTGATCTCCAGAAACGTAAATAGAGCTACGTTTTCAGAATGACCCTATGTTGGCCACATTTTATGCTTTTCTTACTAGATGTACATTAATAAAACACATTTATTCAGGTGATGTATAAATCTTGATTTCAGCAAACTGACACTTATGATTAGTTTTGTTGTGTTTGATCAAATATCAACAGTTAAATGGTATATGTTTGTATCATTCTAATGACAAAATGATCTTCCAGCATCCTACACAGTAAAGTTCTA[C/A]GATGGTGTCGTCCAGACAGTCAAAGGAATCCATGTGAAGCCCTTCACCAAAGAGGTTCATTCCGTATTTCTATCATGCTCATATTTAGACTCTATCACAAAACCTGCTTTGGCCTCGTACTCATTCTCTCAATCCCTCTATTCAGAGACGAAAGAAACTGAGTGACCAGAATGGAGAGAAGCCAGTGATACAACAGGCAGAAAAGGAAATCCAGGAGAATGAAGCCAATGGTGATAAACAAGCAGCAGGACAGACCAACTGTGTTCCTGAAAAAGATGAGGACGGGATCTCAGAAGTGAATGGAGAAGAAGGCGAACAAATGCGAATTAAAGTGGAAAATGAAAGTGTAAAAGAGGAGAGAGATTTGGAGGAAATAGGTCAACACAATTACAGTAAGTCACTTGTGAAGAAGGGCTCAGGGTTTGAGGAGAAAGAAGAGGAGGTCATGGTGAAGATGGAGGACTCTGCGCTGTTTGACTCTAATGTGAACTTCAGCGAGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa27790
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000018743 | Nonsense | 155 | 951 | 5 | 20 |
| ENSDART00000123263 | Nonsense | 155 | 932 | 6 | 17 |
| ENSDART00000126488 | Nonsense | 155 | 544 | 6 | 11 |
| ENSDART00000127817 | None | None | 380 | None | 7 |
Genomic Location (Zv9):
Chromosome 11 (position 25983913)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 24812738 |
| GRCz11 | 11 | 25050354 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCAGAGACGAAAGAAACTGAGTGACCAGAATGGAGAGAAGCCAGTGATA[C/T]AACAGGCAGAAAAGGAAATCCAGGAGAATGAAGCCAATGGTGATAAACAA
Long Flanking Sequence:
CTGTAGCATTCGTTTTAAAGATGAAATGCAGCCATATGTACTTCTGGCTACATAATTCGTGATCTCCAGAAACGTAAATAGAGCTACGTTTTCAGAATGACCCTATGTTGGCCACATTTTATGCTTTTCTTACTAGATGTACATTAATAAAACACATTTATTCAGGTGATGTATAAATCTTGATTTCAGCAAACTGACACTTATGATTAGTTTTGTTGTGTTTGATCAAATATCAACAGTTAAATGGTATATGTTTGTATCATTCTAATGACAAAATGATCTTCCAGCATCCTACACAGTAAAGTTCTACGATGGTGTCGTCCAGACAGTCAAAGGAATCCATGTGAAGCCCTTCACCAAAGAGGTTCATTCCGTATTTCTATCATGCTCATATTTAGACTCTATCACAAAACCTGCTTTGGCCTCGTACTCATTCTCTCAATCCCTCTATTCAGAGACGAAAGAAACTGAGTGACCAGAATGGAGAGAAGCCAGTGATA[C/T]AACAGGCAGAAAAGGAAATCCAGGAGAATGAAGCCAATGGTGATAAACAAGCAGCAGGACAGACCAACTGTGTTCCTGAAAAAGATGAGGACGGGATCTCAGAAGTGAATGGAGAAGAAGGCGAACAAATGCGAATTAAAGTGGAAAATGAAAGTGTAAAAGAGGAGAGAGATTTGGAGGAAATAGGTCAACACAATTACAGTAAGTCACTTGTGAAGAAGGGCTCAGGGTTTGAGGAGAAAGAAGAGGAGGTCATGGTGAAGATGGAGGACTCTGCGCTGTTTGACTCTAATGTGAACTTCAGCGAGAGCACGGTAAAGAGGAACGAGACAGAGGAAACAGATGTCCTGGCACAACAAAAGAAGGAGGAAGTCGAAGAACAATGTCTTGTTCATGACAAAAAAGCACGGAGGCAGCGGATAAAAAGTAAGCACAAAGTAAAACTATTGATGATTAAAATTTGTTTTGAGACATTTGTAAGTTGAGCTCTCTGAAAAGTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1493
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000018743 | Nonsense | 337 | 951 | 8 | 20 |
| ENSDART00000123263 | Nonsense | 341 | 932 | 8 | 17 |
| ENSDART00000126488 | Nonsense | 341 | 544 | 8 | 11 |
| ENSDART00000127817 | None | None | 380 | None | 7 |
Genomic Location (Zv9):
Chromosome 11 (position 25986841)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 24815666 |
| GRCz11 | 11 | 25053282 |
KASP Assay ID:
554-1418.1 (used for ordering genotyping assays)
KASP Sequence:
CCAAYAATCAGCAAACTCAAGGAAAAGAACCAGACTCCTTACATCTTACA[C/T]AACCGTCCAATGGCACATCAGCATCTCAGGCTCAGTGCCAATCAGAAACC
Long Flanking Sequence:
TGTATTGACCCTTAAACCCCCTTCTAGAGTCTAATGTGGCTCCTTGGAAAAATGTATTGCACACCCCTGCTCTATGGTTATGTTAACATATTATCATAATAATCTACTATGTGTTTGTCCTTTCCCAAAAATACAGCCCTACCATTAGGAGAGGATATTGGAACAGAAATTACAAATATATCTATTTTTTGTGACTCGTAATAACATTCACAATTTACAAATTATGTCATACATTTAATGTCAATCACATGATCATGTGTTTTTGTGACATCTGTTTTATTTTCTCTAGGGAAGAGAAGACTTTCAATGGCACGAAGGAGCTCCAAAAAAAACAAGACTGATTCAGGTTTGACTATTTAACCGTAAAACATGTGAGTACTGTACTTGTGCAATATTATTGCTTTATTATTTATCTCTCTTTTCCAGAAAAAAGTCATAATGATGGCAAGCCCAACAATCAGCAAACTCAAGGAAAAGAACCAGACTCCTTACATCTTACA[C/T]AACCGTCCAATGGCACATCAGCATCTCAGGCTCAGTGCCAATCAGAAACCTTCAAGCCTACAGGTGAGATTCCACCCGCCACATCTTTAAAACATATATGTCGTCAAATAATTACATTATGATTAAGAGTTTTTTAATTGCAGCAGTTAGAAAACAAGCATTTCACAATCCCAACCGGTTCAGCAGAGAGCCTCGTGAGTAAAGATCTATACTAAGCACATTTACACAGTCATGAATGATCTTGAATTAGTGATGACTGAATTGACTTCTCACAGTGTATAGAGTCATCAGAAACCAGCCTCCACCGGTACTCTCTATCAACCTGGATCATAACCTGTATAAATGCAACACCCCTGGCTGCTCGAAGTCCTTCCGCAAAGCAAAACTCCTGCACTATCATATGAAGTACTACCATGGAGAGGAGTGCCCCATAGAACCAGAGCAGACCAGGGAAATGGACAAAAAGACCACACTTAATAGTCACGATGGCTCAAAGAAGA
Associated Phenotype:
Normal
| Stage | Entity | Quality | Tag |
|---|---|---|---|
| Larval:Day 5 ZFS:0000037 |
whole organism ZFA:0001094 |
quality PATO:0000001 |
normal PATO:0000461 |
Mutation Details
Allele Name:
sa45429
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000018743 | Nonsense | 348 | 951 | 8 | 20 |
| ENSDART00000123263 | Nonsense | 352 | 932 | 8 | 17 |
| ENSDART00000126488 | Nonsense | 352 | 544 | 8 | 11 |
| ENSDART00000127817 | None | None | 380 | None | 7 |
Genomic Location (Zv9):
Chromosome 11 (position 25986874)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 24815699 |
| GRCz11 | 11 | 25053315 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTCCTTACATCTTACACAACCGTCCAATGGCACATCAGCATCTCAGGCT[C/T]AGTGCCAATCAGAAACCTTCAAGCCTACAGGTGAGATTCCACCCGCCACA
Long Flanking Sequence:
ATGTGGCTCCTTGGAAAAATGTATTGCACACCCCTGCTCTATGGTTATGTTAACATATTATCATAATAATCTACTATGTGTTTGTCCTTTCCCAAAAATACAGCCCTACCATTAGGAGAGGATATTGGAACAGAAATTACAAATATATCTATTTTTTGTGACTCGTAATAACATTCACAATTTACAAATTATGTCATACATTTAATGTCAATCACATGATCATGTGTTTTTGTGACATCTGTTTTATTTTCTCTAGGGAAGAGAAGACTTTCAATGGCACGAAGGAGCTCCAAAAAAAACAAGACTGATTCAGGTTTGACTATTTAACCGTAAAACATGTGAGTACTGTACTTGTGCAATATTATTGCTTTATTATTTATCTCTCTTTTCCAGAAAAAAGTCATAATGATGGCAAGCCCAACAATCAGCAAACTCAAGGAAAAGAACCAGACTCCTTACATCTTACACAACCGTCCAATGGCACATCAGCATCTCAGGCT[C/T]AGTGCCAATCAGAAACCTTCAAGCCTACAGGTGAGATTCCACCCGCCACATCTTTAAAACATATATGTCGTCAAATAATTACATTATGATTAAGAGTTTTTTAATTGCAGCAGTTAGAAAACAAGCATTTCACAATCCCAACCGGTTCAGCAGAGAGCCTCGTGAGTAAAGATCTATACTAAGCACATTTACACAGTCATGAATGATCTTGAATTAGTGATGACTGAATTGACTTCTCACAGTGTATAGAGTCATCAGAAACCAGCCTCCACCGGTACTCTCTATCAACCTGGATCATAACCTGTATAAATGCAACACCCCTGGCTGCTCGAAGTCCTTCCGCAAAGCAAAACTCCTGCACTATCATATGAAGTACTACCATGGAGAGGAGTGCCCCATAGAACCAGAGCAGACCAGGGAAATGGACAAAAAGACCACACTTAATAGTCACGATGGCTCAAAGAAGAGATGCGTTACGTCACGCGAGTGTGCGCGGGTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa21909
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000018743 | Nonsense | 719 | 951 | 15 | 20 |
| ENSDART00000123263 | Nonsense | 724 | 932 | 15 | 17 |
| ENSDART00000126488 | None | None | 544 | None | 11 |
| ENSDART00000127817 | Nonsense | 173 | 380 | 4 | 7 |
Genomic Location (Zv9):
Chromosome 11 (position 25992451)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 11 | 24821276 |
| GRCz11 | 11 | 25058892 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCACATCTTTTTTTTCTGCAGGAACCAGACTCATCCAGATCTTAAGTTGT[G/A]GCGACAGCCGTGGAAGCCAACTGAAAGATCCAGGATGAAAAGCAAGGCTC
Long Flanking Sequence:
GACCCCATTTTACACCTGTATTCAGCATCACTCACTTGACTAAAGAGCATGGGTCTTTTCTGTAGTTTCACTTAACTTATTGCCAATTGTGTTCCCCAGCTGGGAAATCTTAATGATGTCATTTCCTGCTGTTTTCATTTAAATTTGTTCACTAAATCTTGCTGTCTCATTTGTGTCTGTGTATCCAGGACGGGTGAGAGGTCAGAGACAGAGCCTGAGGTACTGGTATGACAGGGATTGGCTGAGCACTGGCCACATGTACGGCCTCTCTTTCCTGGAAAACTACTCCCATCAAAATGGCAAAAAGATTGCAGCCACCCATCAGCTGTTAGGGGACGTCCAGCATGTGGTTGAAGTCCTCAGTGGCCTGCAGCTCAAAATCAGCGTGCTACAGTGAGTGATGCTGCTTTTTCTCTGTTTGAATCCATTCGATATGTGCTATTTAAAAATCCACATCTTTTTTTTCTGCAGGAACCAGACTCATCCAGATCTTAAGTTGT[G/A]GCGACAGCCGTGGAAGCCAACTGAAAGATCCAGGATGAAAAGCAAGGCTCTTCATGATGCAAAAACAGTTTCTTCTTCAGCAGGCTTGGAGACCATTGAAAATAAAGAGGCGTTTTCTTCATCCTTCCAGGACTACATCAGCAGTGAGCACTGCTACCAAAAACCACAAACTCTGTATCAGGTATTGGAGCCAAGGCTGGTACTAAAAACACGGGTAGAGTCACTGCTGGAAGACCGATTACACAGCACAGAAAGAGTGCCGATGAATGAACAACACTACAATGGAGACATGCTGAAGACTTCTAATAGTCAGCTCTTTAACCACAGCAAGGTGGGTGTCACATTAAATGAGCCTTTAACAGCATTATCACAGTCCAGTTTTGTGAAATGTAATGGTGTGATTTGATATTTTTAAAGGTAAAATAAAATATAGGTATTTGCCATAGTATGAAAATATGGATATATCTAAGCATAGCTGAATAATAAATGTTCAGTATATG
Associated Phenotype:
Not determined