ZMP
zgc:56376
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC394070 [Source:RefSeq peptide;Acc:NP_957389]
Human Orthologues:
TRIM54, TRIM55, TRIM63
Human Descriptions:
tripartite motif-containing 54 [Source:HGNC Symbol;Acc:16008]
tripartite motif-containing 55 [Source:HGNC Symbol;Acc:14215]
tripartite motif-containing 63 [Source:HGNC Symbol;Acc:16007]
tripartite motif-containing 55 [Source:HGNC Symbol;Acc:14215]
tripartite motif-containing 63 [Source:HGNC Symbol;Acc:16007]
Mouse Orthologues:
Trim54, Trim55, Trim63
Mouse Descriptions:
tripartite motif-containing 54 Gene [Source:MGI Symbol;Acc:MGI:1889623]
tripartite motif-containing 55 Gene [Source:MGI Symbol;Acc:MGI:3036269]
tripartite motif-containing 63 Gene [Source:MGI Symbol;Acc:MGI:2447992]
tripartite motif-containing 55 Gene [Source:MGI Symbol;Acc:MGI:3036269]
tripartite motif-containing 63 Gene [Source:MGI Symbol;Acc:MGI:2447992]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa27397 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa11986 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa27397
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000127859 | Nonsense | 226 | 348 | 1 | 1 |
| ENSDART00000127859 | Nonsense | 226 | 348 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 9 (position 24934845)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 24090631 |
| GRCz11 | 9 | 23901500 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACGTGCCAAACAAAAGCTTGGCGAATGCTTCGATTCCCTCTATGCAGCCT[T/A]GGAGGAGCGTAAAAATGCCCTCTTAGAGCGTATTGGCAAAGAGCAAGACG
Long Flanking Sequence:
TTATCGTTTCTCTGGTGGTGTTTTTCGGTGCCCAACTTGTCGATTTGAAGTGGTTCTTGATCGCCATGGTGTGCATGGACTTCAGAGGAATCTTCTTGTTGAGAACATAATCGACATTTACAAACAGCAACAAGAGGGTGGTGGAGGAGGTGGTGGCAGCACCACTGAAAGTCCAATAAAACCCAAAAGCTCCAAAGAGCTAATGTGTCAAGAACACGAGGACGAGAAGATCAACATCTACTGCGTTACTCACCAAACTCCCACTTGTTCCATGTGTAAGGTATTTGGCCAGCATAAGGACTGTGAGGTGTCACCACTTGCTAGTGTCTATCAGGCTCAAAAGGGAGAGCTGAGCAATGCCATTGATGCTCTTGTGGCGGGGAATGGCCGCCTTCAGGCGTTGCTTAACCAGATGGAGGAGGCCTGCACAGCTGTTCAGGACAATGCTCAACGTGCCAAACAAAAGCTTGGCGAATGCTTCGATTCCCTCTATGCAGCCT[T/A]GGAGGAGCGTAAAAATGCCCTCTTAGAGCGTATTGGCAAAGAGCAAGACGAGAAGGTTGGTGCACTCAGGAGTTTGGCTAGGCGTTATGGGGACCGTCTTCAGGCAGCCACAGAGTTAACAGACATGGCAGTTCAGGCTCTGGAGCAAAGTGGTGCCGCAGAGTTCCTGCAGGCCTCCAAGAACCTGATCTCCCAGACAAAAGACGCAGCAAAGAGCTCACTTGCTGAAGAAAGGCCCGAGCCAGGCTTTGAAAGAATGGACCATTTCACTTTGGATACGGAGCAGGTGGAGACTTTGTTGTCCAAGATGGACTTTGGAGGAGAGGATGATGAGGAATTTGAAGACGCTGAAGATCAAGAAGAGGAGTAAATAAGTTGGAAGAAAAGAAGAGGTTTAGGAAGGTTTAGCAAGGTCATTGACAAATGAGAAAATAGAAGTTTTAATATTCGTATTTCACTGCTAAGCAGTGTTGTCATTTCAACATGTATAATCAAAAGAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11986
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000127859 | Nonsense | 226 | 348 | 1 | 1 |
| ENSDART00000127859 | Nonsense | 226 | 348 | 1 | 1 |
Genomic Location (Zv9):
Chromosome 9 (position 24934845)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 9 | 24090631 |
| GRCz11 | 9 | 23901500 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AYGTGCCAAACAAAAGCTTGGCGAATGCTTCGATTCCCTCTATGCAGCCT[T/C]GGAGGAGCGTAAAAATGCCCTCTTAGAGCGTATTGGCAAAGAGCAAGACG
Long Flanking Sequence:
TTATCGTTTCTCTGGTGGTGTTTTTCGGTGCCCAACTTGTCGATTTGAAGTGGTTCTTGATCGCCATGGTGTGCATGGACTTCAGAGGAATCTTCTTGTTGAGAACATAATCGACATTTACAAACAGCAACAAGAGGGTGGTGGAGGAGGTGGTGGCAGCACCACTGAAAGTCCAATAAAACCCAAAAGCTCCAAAGAGCTAATGTGTCAAGAACACGAGGACGAGAAGATCAACATCTACTGCGTTACTCACCAAACTCCCACTTGTTCCATGTGTAAGGTATTTGGCCAGCATAAGGACTGTGAGGTGTCACCACTTGCTAGTGTCTATCAGGCTCAAAAGGGAGAGCTGAGCAATGCCATTGATGCTCTTGTGGCGGGGAATGGCCGCCTTCAGGCGTTGCTTAACCAGATGGAGGAGGCCTGCACAGCTGTTCAGGACAATGCTCAACGTGCCAAACAAAAGCTTGGCGAATGCTTCGATTCCCTCTATGCAGCCT[T/C]GGAGGAGCGTAAAAATGCCCTCTTAGAGCGTATTGGCAAAGAGCAAGACGAGAAGGTTGGTGCACTCAGGAGTTTGGCTAGGCGTTATGGGGACCGTCTTCAGGCAGCCACAGAGTTAACAGACATGGCAGTTCAGGCTCTGGAGCAAAGTGGTGCCGCAGAGTTCCTGCAGGCCTCCAAGAACCTGATCTCCCAGACAAAAGACGCAGCAAAGAGCTCACTTGCTGAAGAAAGGCCCGAGCCAGGCTTTGAAAGAATGGACCATTTCACTTTGGATACGGAGCAGGTGGAGACTTTGTTGTCCAAGATGGACTTTGGAGGAGAGGATGATGAGGAATTTGAAGACGCTGAAGATCAAGAAGAGGAGTAAATAAGTTGGAAGAAAAGAAGAGGTTTAGGAAGGTTTAGCAAGGTCATTGACAAATGAGAAAATAGAAGTTTTAATATTCGTATTTCACTGCTAAGCAGTGTTGTCATTTCAACATGTATAATCAAAAGAA
Associated Phenotype:
Not determined