ZMP

zgc:56376

Ensembl ID:

ENSDARG00000086685

ZFIN ID:

ZDB-GENE-040426-1003

Description:

hypothetical protein LOC394070 [Source:RefSeq peptide;Acc:NP_957389]

Human Orthologues:

TRIM54, TRIM55, TRIM63

Human Descriptions:

tripartite motif-containing 54 [Source:HGNC Symbol;Acc:16008]
tripartite motif-containing 55 [Source:HGNC Symbol;Acc:14215]
tripartite motif-containing 63 [Source:HGNC Symbol;Acc:16007]

Mouse Orthologues:

Trim54, Trim55, Trim63

Mouse Descriptions:

tripartite motif-containing 54 Gene [Source:MGI Symbol;Acc:MGI:1889623]
tripartite motif-containing 55 Gene [Source:MGI Symbol;Acc:MGI:3036269]
tripartite motif-containing 63 Gene [Source:MGI Symbol;Acc:MGI:2447992]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa11986	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa11986

Status:

Available for shipment
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Availability:

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Mutation:

T > C

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000127859	Nonsense	226	348	1	1
ENSDART00000127859	Nonsense	226	348	1	1

Genomic Location (Zv9):

Chromosome 9 (position 24934845)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	9	24090631
GRCz11	9	23901500

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AYGTGCCAAACAAAAGCTTGGCGAATGCTTCGATTCCCTCTATGCAGCCT[T/C]GGAGGAGCGTAAAAATGCCCTCTTAGAGCGTATTGGCAAAGAGCAAGACG

Long Flanking Sequence:

TTATCGTTTCTCTGGTGGTGTTTTTCGGTGCCCAACTTGTCGATTTGAAGTGGTTCTTGATCGCCATGGTGTGCATGGACTTCAGAGGAATCTTCTTGTTGAGAACATAATCGACATTTACAAACAGCAACAAGAGGGTGGTGGAGGAGGTGGTGGCAGCACCACTGAAAGTCCAATAAAACCCAAAAGCTCCAAAGAGCTAATGTGTCAAGAACACGAGGACGAGAAGATCAACATCTACTGCGTTACTCACCAAACTCCCACTTGTTCCATGTGTAAGGTATTTGGCCAGCATAAGGACTGTGAGGTGTCACCACTTGCTAGTGTCTATCAGGCTCAAAAGGGAGAGCTGAGCAATGCCATTGATGCTCTTGTGGCGGGGAATGGCCGCCTTCAGGCGTTGCTTAACCAGATGGAGGAGGCCTGCACAGCTGTTCAGGACAATGCTCAACGTGCCAAACAAAAGCTTGGCGAATGCTTCGATTCCCTCTATGCAGCCT[T/C]GGAGGAGCGTAAAAATGCCCTCTTAGAGCGTATTGGCAAAGAGCAAGACGAGAAGGTTGGTGCACTCAGGAGTTTGGCTAGGCGTTATGGGGACCGTCTTCAGGCAGCCACAGAGTTAACAGACATGGCAGTTCAGGCTCTGGAGCAAAGTGGTGCCGCAGAGTTCCTGCAGGCCTCCAAGAACCTGATCTCCCAGACAAAAGACGCAGCAAAGAGCTCACTTGCTGAAGAAAGGCCCGAGCCAGGCTTTGAAAGAATGGACCATTTCACTTTGGATACGGAGCAGGTGGAGACTTTGTTGTCCAAGATGGACTTTGGAGGAGAGGATGATGAGGAATTTGAAGACGCTGAAGATCAAGAAGAGGAGTAAATAAGTTGGAAGAAAAGAAGAGGTTTAGGAAGGTTTAGCAAGGTCATTGACAAATGAGAAAATAGAAGTTTTAATATTCGTATTTCACTGCTAAGCAGTGTTGTCATTTCAACATGTATAATCAAAAGAA

Associated Phenotype:

Not determined