Busch Lab

ZMP

lmo7a

Ensembl ID:
ENSDARG00000004930
ZFIN ID:
ZDB-GENE-030219-74
Description:
LIM domain only protein 7 [Source:RefSeq peptide;Acc:NP_001121703]
Human Orthologue:
LMO7
Human Description:
LIM domain 7 [Source:HGNC Symbol;Acc:6646]
Mouse Orthologue:
Lmo7
Mouse Description:
LIM domain only 7 Gene [Source:MGI Symbol;Acc:MGI:1353586]

Alleles

There are 10 alleles of this gene:

Allele Name Consequence Status Availability
sa13371 Nonsense Available for shipment Available now
sa27385 Nonsense Available for shipment Available now
sa21468 Nonsense Available for shipment Available now
sa17775 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa13371
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000009920 Nonsense 142 1826 6 33
ENSDART00000090782 None None 270 None 7
ENSDART00000134084 None None 46 6 6
ENSDART00000134768 None None 351 None 8
ENSDART00000144843 None None 221 None 6
ENSDART00000145576 None None 252 None 7

The following transcripts of ENSDARG00000004930 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 22971658)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 22127444
GRCz11 9 21938313
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GCAGAAAGGCACATGCTGATCCATTTTATAATGGACCTTACCTAAAACTG[A/T]AGGCTTTCGAGGGATTACTTGGCACCACACTATATAAGGTAAGATATAAT
Long Flanking Sequence:
AATGCAGGGGCCAAAAGATTGTCTGGATACATGAGTGTCTGGAGCGAATGTCTAAATAAAATATTGGTGGATTTGAGAGAAACAAACCTACAATATAAATACATCAAGCATTTAATCATATTGTTTTTTAAAAGTAATCTTTTGAGGCATTATTGCAATTTGAAGTAAAAAAAAATTGTTTGCTCTGTTTTTATATTTTACTATAGTTTCTCATTTTAATGTGTTCATGTTATGGCAAAGTTTCATTTTTAGATGCCATTACTCTTGCATGCCCTTTTTCTTAACTTTAATATGCTGATTTTGGTTTTTTTATCTAGTTCATTGTGTGTTGCAGCTTGCAATCAGCCTTTAATTTTATCATTAAACAGTATATTTGTTGCAACATATGTACTAATAGTATACTAATGTGTTGCTTTGTATCTTAGGTTCTAATCACCATATATTGGTTGGGCAGAAAGGCACATGCTGATCCATTTTATAATGGACCTTACCTAAAACTG[A/T]AGGCTTTCGAGGGATTACTTGGCACCACACTATATAAGGTAAGATATAATACTGACATTGTGTGCTATTTGCCTCTAGTATTTACTCTCAGAACTTATATTGTTTGTTTGAATACCACTGATTCTTTTAGAGTAGCTTGCCATGTAAATCTTTTTTTACATCCTCTCTGGTATTTAAGATATCTTGCTAGGAATGCAGTATGCTGGGCTCATAGCTACTAAATACACTTCATAAAGGGCTGTTCTGTCTGTTTTCAAGTGCAAACAACAATCTTAGATTGAAATACATTTATTTAAAAGGCAGAATTGATTACACTGTAAAAAAAAAAACCTGGTGCCCTTAATTTGACCTTAACTTTATGAGTCCCTTAAACTTATATTATTTTAAACTGGCTTAAAGATGATGGCATAACTTATAAAATTAAGTTAGAACAAGATTAATTTAGATTAAGATTAAGATTAACTTGAATCTGTTAAAATGACCTAAAACATATGCTGTGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27385
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000009920 Nonsense 219 1826 7 33
ENSDART00000090782 None None 270 None 7
ENSDART00000134084 None None 46 None 6
ENSDART00000134768 None None 351 None 8
ENSDART00000144843 Nonsense 17 221 1 6
ENSDART00000145576 None None 252 None 7

The following transcripts of ENSDARG00000004930 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 22970139)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 22125925
GRCz11 9 21936794
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCTCCAGGACCTATAGCACATCCTCAGACGCCACACTCAAAGGCAGCAGC[G/T]AGGGTAAGACTCTTCAGTCTCTCTTGTGTGTTCTAGCTTGACTTTTTGAG
Long Flanking Sequence:
GAGAACTGTAAAATAACGGCCGTTAAATTACAGAACTTTACTGTAAAATAACAGAGGTTATATTACAGAATTTTACCAGAAATGTTAATTTAAGGAAATTTCTGTAATTTAATGTCTGTTATTGTACAATTACAAGACTGGCCCTACTGTCATGACTAACAATTGAAGAAACAGACGATTCTTATGAGTAAGCCCGTGTTTGTGCACTGATCAAGTCTGTGTGCTGTGTTTGTTGTTTGTGTTGTTCCCTTGTGCCTGCTGTGTGTGTCGGCCCGTCTCCCTCACACTCACACCCTTGTGCTCGACAGGCTCTAGAGGATTGCACATCACTGCGGGCCAGTGTGCCAAACCGCTCTTATCCAGATAGCTGGTACTCAGAGAGAGAAGAGCTCTTCCCGCTGCGGGCCGGACACAGGAGAGAAGACTCTCTAGACAGCCTCAATTCGCTGGGCTCCAGGACCTATAGCACATCCTCAGACGCCACACTCAAAGGCAGCAGC[G/T]AGGGTAAGACTCTTCAGTCTCTCTTGTGTGTTCTAGCTTGACTTTTTGAGATAAGTTGATGAATTAAAGCTGGAGCTGGATGCTTTATTTTGTGTCATTTTACACAAAAAAAGTCAAAAAGAAAGAATAATGTGCAGTTCAGTTTTTGTATGGGTGACATAGTGACTCAGTGGTTAGCACTGTCGCCTCACAACAAGAAGGTTGCTGGTTCAAGTCCCGGCTGGGTCAGTTGGCATTTCTGTGTGGAGTTTACATGCTCTCCTCATGTTCATGTGGGCTTCCTCTGGGTGCTCTGATTTCCCAGTCCAAAGACTTGCGCTATAGGTGAATTGAATAAACTAAATAGGCCATAGTTTATTTCTATGAAAGAGCATGTATGGATGTTTTCCAGTACTGGGTTGCAGCTGCAAGGACATTGGCTGCGTAAAACATATGCCAGAATAGTTGGCGATTCATTCTGCTGTGGTGACCCCTGATGAATAACAGGACTTAGCCGAAGA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa21468
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000009920 Nonsense 887 1826 16 33
ENSDART00000090782 None None 270 None 7
ENSDART00000134084 None None 46 None 6
ENSDART00000134768 None None 351 None 8
ENSDART00000144843 Nonsense 200 221 6 6
ENSDART00000145576 None None 252 None 7

The following transcripts of ENSDARG00000004930 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 22952827)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 22108613
GRCz11 9 21919482
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTCTTGCCTCCCTCCCTCGCTCCTTCCCCTTTTCAGAGAGAGCAGAGGG[C/T]AAAGCAACTTAAGGGACAGCTTTAACTCCATCGTTGATGATGTCTTTGAA
Long Flanking Sequence:
AGGAGTGTCAATTCTGACATTGTCAAGAAGAAAGAGGAGCGAGAGCAGATCGAGCAGATCACTTCAGTTGGCACCAGGAAATCAAAAACCTTCAAGGAGATGCAGGATGAGAGGTGAGCTTTCATTCCTTCAAATTAGGCTGAAGCTGACATTTTAATTGTATTTTGTTTCTCAGTTTTTTATATACATTTTTGTAATTTAGTTTTTAATTTTAGCTTTCATTTTATTGTATTTTATATTTATTTTTAGGTGACATCTACTATTTATTTTTATTTTAATTACATACAGTATTGATTCAAAAATGTTGCTGTTTAATTTCAGATTTGAGTTGTGATTCACTATTATCTAAATGCTTGCGGTCAGTGTTTGTGTCATTCTGCTCTCTGCCGAAAGTGTAGTCTGTTCTACTTTCATCTGCTCGGTGTAAAAGTGTAATCTAATCGCAGTTCTTGTCTTGCCTCCCTCCCTCGCTCCTTCCCCTTTTCAGAGAGAGCAGAGGG[C/T]AAAGCAACTTAAGGGACAGCTTTAACTCCATCGTTGATGATGTCTTTGAAGATCCTGTTCCCCGAAGCAGAACTCTGCCCCCACGTAGCTACACCATTGACACTCCTTACACAGCCACAGACAAACCCTTTGTACCCTCCATACCGTCACTCAGAGAAAAGGAACCTGTGGCTGGAACCCTGGCATCAGATCAGACAGATTTATCCACCAAACCTGCTCGTGCCAGTCCTGATATCCCAGATAAAATTAATAATAGCAATCAGATGAGCCAAACAACGACCCAAAGTCTTCTGGACGATCCCGTTCCTGCTTTTTCCAACAGCAGCACTAGCCTGATTAAGCCAGCCAGTGCCACCAAGCCCACCAGCAGCACTAAACCCAACATCTCGGAGTTTATAAGCAACACTAAGCCAGCTGAAAGCTCCAGTGACGCCATTAGCTCATTGTATAAGCCCAATTCAATGGATACAAAGCCGTCTGGGCTGGATCAGGTTTCTGCC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa17775
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000009920 Nonsense 1289 1826 20 33
ENSDART00000090782 Nonsense 205 270 5 7
ENSDART00000134084 None None 46 None 6
ENSDART00000134768 None None 351 None 8
ENSDART00000144843 None None 221 None 6
ENSDART00000145576 None None 252 None 7

The following transcripts of ENSDARG00000004930 do not overlap with this mutation:

Genomic Location (Zv9):
Chromosome 9 (position 22947572)
Other Location(s):
Assembly Chromosome Position
GRCz10 9 22103358
GRCz11 9 21914227
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
AAGACCATCAATCTGACCAGTCTGGATCCTCTAGGTCCCTCCGAGCCATA[T/A]CACACCACCAGCCTGGACTTCACATCCCAACAATCCAAGGACSCCGTTGT
Long Flanking Sequence:
CATTTTTTGTTTAAACTGTCCCTTTAAAGTACAAGTATGTACCTTATAAAAAGATACTGCCTTAATGACAGCTTTGTACCTTCATTTTTGAGTGTAGCGTGCATTTTCTATTTCTCAAGTTCTGTATGTGGATATTTTCAGTGGTTAATTTTTTCGGTGTTTACTAACAGGGTTATGGTTTGTGACTTCATTTGTCACACAATCAGAAGGCATCTGTAAGCTTGTTGGTAAACCTGGTTTGTGGAGCTGTTTCTGACTGCGTGGCAGGGGAAGGTGGTCTGTCTTTCATCCCCACTTTTTTTAGAAACATTCAGTTTTTAGTGTCTGTCTGTACAGTAGTTGCGTATCTGTTTCCATAGTTTGCTAATTGTTTTTTAAATGAATGGTTTTGTTGACATGCTACAATCAGACTGGGGCAGAGACCTACCTTCCCTTCCATATAAAAGCCATAAGACCATCAATCTGACCAGTCTGGATCCTCTAGGTCCCTCCGAGCCATA[T/A]CACACCACCAGCCTGGACTTCACATCCCAACAATCCAAGGACGCCGTTGTGAAATCTGTCAACGTCAGCTCACAGCCAGCTTATGTGAGCAGACTACAGTTGATTTCACTTACTAATGATAACCCATTTTAAACTGATTTATGTTAAAGTGTTTGTTCAGGCCAAAATGAAAATAATCTCTCGTCATTTACATGCTCAAATGTTCCAAACCCATAATACTCTTGTTCATCCTCAGAAGGATTTATGTTTTTCCAGTGAAAGTCTGTTCACCCTAAACTCTACTGCTTTAAAACATTCATAAAGAGATAAAAATAAATAAATAAATAAATCCTCATGAATCAAGCAGTTTTATCTTTTGAAGAGTCTCCATCTCTTTATGATTCACAGATCACAGAATGTCTTGATCAGTGCACATAAAGAAATTTCGAAAAAACAAAACAACAAAAGCATTTGAATCTAGGAGCGACCAAAATTGTCATTCTGTGTGTGTACAATCATGA
Associated Phenotype:
Not determined