Busch Lab

ZMP

zgc:122989

Ensembl ID:
ENSDARG00000046124
ZFIN ID:
ZDB-GENE-051113-116
Description:
Zgc:122989 protein [Source:UniProtKB/TrEMBL;Acc:Q567J1]
Human Orthologue:
RAB11FIP1
Human Description:
RAB11 family interacting protein 1 (class I) [Source:HGNC Symbol;Acc:30265]
Mouse Orthologue:
Rab11fip1
Mouse Description:
RAB11 family interacting protein 1 (class I) Gene [Source:MGI Symbol;Acc:MGI:1923017]

Alleles

There are 4 alleles of this gene:

Allele Name Consequence Status Availability
sa34455 Nonsense Mutation detected in F1 DNA Not yet available
sa44692 Nonsense Mutation detected in F1 DNA Not yet available
sa27245 Nonsense Mutation detected in F1 DNA Not yet available
sa41264 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa34455
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000067809 Nonsense 96 360 2 3
ENSDART00000124549 Nonsense 74 994 1 4
Genomic Location (Zv9):
Chromosome 8 (position 39113556)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 37968681
GRCz11 8 38001620
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGACAGCGAAGGAGAAGGAGAGGGCAGTTCAGACTCTCCAAAGAAGAAAT[C/A]AAAGCTGAAATCCCTGTTTGGGCCAAAAACTAACCTCCAAAGGAATGTGT
Long Flanking Sequence:
ATCTTGCAATGTGACTGTTGCTGGTTTGCACAATATATTTTGCGGCCCGAATTTGTCATTTAGCCAGTGGCTATAACCTAAACTATTTATAAATTTTTTGTAGAATAATTGTAGTTAACAATTCTTATGTGTGATGATTAAAATCTTTAAACTAGCTAAAATAAATGGTCCTTCACAAGTTGTCTGCCACGCAATTTAATGAATACCATTTGTTTTTCTTTGAAGCTGGTACAAGCTGGTGGATAAGCATGGGAAGCAAGAGAAGGACCGTGGGGAAGTTATGCTGGACATTCAGTTCATGAGGAATAACATGACAGCCAGCATGTTTGACCTCTCCATGACAGAGAAGCCTCGCTCTGGAATCGCTAAGCTCAAGGATAAAATTCGTGGAAAGAAGAAAGACGGCCTGTCAGATTCTGCTTCTGCGATTGTGCCCTCATCAATGGAAACAGACAGCGAAGGAGAAGGAGAGGGCAGTTCAGACTCTCCAAAGAAGAAAT[C/A]AAAGCTGAAATCCCTGTTTGGGCCAAAAACTAACCTCCAAAGGAATGTGTCTCAGTCCATGTCAACCCTCGGCACCCTACCTGAGAAGAACAGTTCACTTAGCAGCAGCAGATCATCAGGCCTTAATGTGGATTCTCCTGATGGTAAAATAAATGATTATGCATCTTGTTAAGAATACTTTATTTTTATTTATTTTTATTATTATTATTCTTAGGTGAGTTTTGTTATTGTAAGCTATTGAGTACTTATTGTAAGTACAAAGTAAAAAAACATTTAGGCCATGTGTAATTTGTAAAACATTCATTCTTAAATCATTTCAAAACGTTTTAATATAGATATTAAGGAGCATGTCACACTGTAGAATAGAGTAGTGGTTCTCAACCACGTTCCTGAAGGACCACCAGCACTGCATGTTTTGGGTGTCTCTTTTGTCTGTCACACCAATTTAAGGTCTTCAGTCTCTGCTAATAAGCTGATGATCTGAATCTGGCAAGTTTGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa44692
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000067809 Nonsense 128 360 2 3
ENSDART00000124549 Nonsense 106 994 1 4
Genomic Location (Zv9):
Chromosome 8 (position 39113460)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 37968585
GRCz11 8 38001524
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGTGTCTCAGTCCATGTCAACCCTCGGCACCCTACCTGAGAAGAACAGTT[C/A]ACTTAGCAGCAGCAGATCATCAGGCCTTAATGTGGATTCTCCTGATGGTA
Long Flanking Sequence:
TTTGTAGAATAATTGTAGTTAACAATTCTTATGTGTGATGATTAAAATCTTTAAACTAGCTAAAATAAATGGTCCTTCACAAGTTGTCTGCCACGCAATTTAATGAATACCATTTGTTTTTCTTTGAAGCTGGTACAAGCTGGTGGATAAGCATGGGAAGCAAGAGAAGGACCGTGGGGAAGTTATGCTGGACATTCAGTTCATGAGGAATAACATGACAGCCAGCATGTTTGACCTCTCCATGACAGAGAAGCCTCGCTCTGGAATCGCTAAGCTCAAGGATAAAATTCGTGGAAAGAAGAAAGACGGCCTGTCAGATTCTGCTTCTGCGATTGTGCCCTCATCAATGGAAACAGACAGCGAAGGAGAAGGAGAGGGCAGTTCAGACTCTCCAAAGAAGAAATCAAAGCTGAAATCCCTGTTTGGGCCAAAAACTAACCTCCAAAGGAATGTGTCTCAGTCCATGTCAACCCTCGGCACCCTACCTGAGAAGAACAGTT[C/A]ACTTAGCAGCAGCAGATCATCAGGCCTTAATGTGGATTCTCCTGATGGTAAAATAAATGATTATGCATCTTGTTAAGAATACTTTATTTTTATTTATTTTTATTATTATTATTCTTAGGTGAGTTTTGTTATTGTAAGCTATTGAGTACTTATTGTAAGTACAAAGTAAAAAAACATTTAGGCCATGTGTAATTTGTAAAACATTCATTCTTAAATCATTTCAAAACGTTTTAATATAGATATTAAGGAGCATGTCACACTGTAGAATAGAGTAGTGGTTCTCAACCACGTTCCTGAAGGACCACCAGCACTGCATGTTTTGGGTGTCTCTTTTGTCTGTCACACCAATTTAAGGTCTTCAGTCTCTGCTAATAAGCTGATGATCTGAATCTGGCAAGTTTGCTTAAAGGTCCATGAACCCCCCTCTCTCAGCAAGGTGTTTTCACACCTCTTACTTTTGAAAAAGTAAGGAAAGTGGGTGTGTCCAGTTTTGCATGAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa27245
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000067809 Nonsense 199 360 3 3
ENSDART00000124549 Nonsense 177 994 2 4
Genomic Location (Zv9):
Chromosome 8 (position 39110763)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 37965888
GRCz11 8 37998827
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATAACCTCTGTATCAACGGCAGCCATGTTTATGCAGAGGATCAAGAACCC[A/T]AAGCCAGCTTTGGCTCCACGCTCAGCCTGAACAGCTCCGGAAAGGGTTCG
Long Flanking Sequence:
GGCCAAGTTTACAAATTGCATTGTTTCCGAATTAAAAAAAAAAAATTGTTTATTATTTTCTGCAAAGCTGCTTCTGATCATGATGTGTCCACACTAAATGGTTATAAGGGACGTGTTAAAGGGATTATATGCAACATCTTTCATTTATTCTTTTAGGAAAGGAGAAAGCTCTACTTAACGTACTTGGAGGGAAAATGTGCTTTATGCAGTGTTAAAGTTATATAAAGCTTGAAGCAGTGGCCGATAAGCATGAAATTTCTGATCAGAGCATCCCTATTTATAGCTTTGTTGAGTAGAAAATACTAAAACTTTTCCCTTATCTTTTTCCTCCTACAGTGAAAAAGAAGTTTAAAATTCTGGGACACAAGCGCACTGACAGCTCGGATAGCAAAGTGTCACTTGGCCCTTTTTCTCTTCTGAGTCGCTCTAAACAGAACATCCAGGAGCAGAATAACCTCTGTATCAACGGCAGCCATGTTTATGCAGAGGATCAAGAACCC[A/T]AAGCCAGCTTTGGCTCCACGCTCAGCCTGAACAGCTCCGGAAAGGGTTCGGCAGAGGATGTTCGTAAATTCCATCAACGGAATATTTCTGACGTCTCCATCGACTCATTTAAAGGCCTAAGTATTCCCTCGTACAAGCCTGAAGTGCAAGACAAAACTGTCCCACAGCGCCCTCTGGAGGACAAAAACTCGCAACCTGTGAAGGTGCTGGAGGAGGAGAAGGAAAAGAAACCCGAAGGAAGAAGCCTTCAAGAGATGCTGGACCGGCAGGAGGAGCAAGAGCAATGGAGGCAGCAGGAACGAGAGAGGAAGCAGGAGGAAGAGAGGAAAGAACAAGAGAGGAAGCGCAGAGAAGAAGAAGAGCTGCAGAGGAAGAGACGTGAAGAGGAGACTCAGCATGCCGAGGAGCAGCGGCACCAGGAGGAGAGCAGAGTAACTGAGCGGCTCTCCTCGCTCTTCGGCATTGGAAAGAAAAAGGAAGAGAAGAAAGAGGGATCTGGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa41264
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000067809 None None 360 None 3
ENSDART00000124549 Nonsense 673 994 3 4
Genomic Location (Zv9):
Chromosome 8 (position 39101076)
Other Location(s):
Assembly Chromosome Position
GRCz10 8 37956201
GRCz11 8 37989140
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAACATTTACCTCAGGATATGGAAAGGAAGACTCCTGATGGCATTACCTA[T/G]CAACCCTCCCATTCAATAGATAAGCCTACACCAGCCTCCAGGGTCAAACA
Long Flanking Sequence:
TCCAGTGCTAGAAACGGGAGACAGGACTCTAAAAATACTCAAAGGCCTCCTCTTCCTCTTCCTGACTATGAAACACTTTTTCCCAAGAAGAGGCATGGGGTGATGAGTCAAACACGTTGGGACCATATTATCGCAGAGGTAAACCAGAGAAACTGGGATTTCTCGGAAGAGATGAACGTAGATGGACCAAACAAATCATTGTCGAATTCATCTGCAGTTTTGAAGGACAGAACCTCAGCCAACCTTAACCAGCTTCAAAGAAATCATGAGCCTCTTCCACCTGTCCTTACAAGGCCCAAAGAAGCCCTCAAGCCACCAAAGGTTCATGAAACATCAGAACCAACGCTTAAGACCACTGTCCAACATGACAATTTCAATGAGTCTGTATATGCTACTGTTAATAAACCTGGAAAATCAAAGAACTTTGAAAACAACCCACATCCAGCTGTCCAACATTTACCTCAGGATATGGAAAGGAAGACTCCTGATGGCATTACCTA[T/G]CAACCCTCCCATTCAATAGATAAGCCTACACCAGCCTCCAGGGTCAAACAAAATATAAATCCAAAGACTGAAGATGTGGCTAAACAGATGCCTTCAGCCAAACCCCGACAACAGTCATTAGTCAAGGACCCAGTCAGACAGGTTGAACCAGACCAGCATGTGACAACTCAGCCTGTGACTTCAGAAAATAACAAAGCTGAGAAATCAGAGAAGGGCCAAAAGGGAAGTGTTTTTACAAGTAAGTCCCACCTTAGAACTTCAGAAGTTCCAGAAAATTTGGGAAAACTTTCTAAGGATCCTGATGGAAGTGGAATGATCAACACATTCCCAGGTGATAATGTAGGTACTGAAGATCCTTGGGCTTTTATACCACAGCAAACCACAGATGAGGAGGATGTGCTCTTCACTAAAGGCCCAACGCAATTGAAAAGTATTGAAGATCAAGAGTTATCCTACAATAAAAACCTAGCAAAAAAAGATAACAGCATGGCACCAAAATC
Associated Phenotype:
Not determined