ZMP
cthl
Ensembl ID:
ZFIN ID:
Description:
cystathionase (cystathionine gamma-lyase), like [Source:RefSeq peptide;Acc:NP_001005400]
Human Orthologue:
CTH
Human Description:
cystathionase (cystathionine gamma-lyase) [Source:HGNC Symbol;Acc:2501]
Mouse Orthologue:
Cth
Mouse Description:
cystathionase (cystathionine gamma-lyase) Gene [Source:MGI Symbol;Acc:MGI:1339968]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa26780 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa11242 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa26780
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000104200 | Nonsense | 153 | 400 | 5 | 12 |
ENSDART00000136314 | Nonsense | 157 | 404 | 5 | 12 |
Genomic Location (Zv9):
Chromosome 6 (position 37350213)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 37423971 |
GRCz11 | 6 | 37401865 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCAGTAACTAAAATATGGTATTAAATATTCCCGTTATGACAGATGGTTTG[G/A]TTTGAAACCCCCACAAACCCTACATTAAAGGTTGTGGACATCCAGGCCTG
Long Flanking Sequence:
CTTTTGCCTCTGGAATAGCAGCGACTGCGACCATCACCCATCTTTTAAAGCATGGAGATGGAATTGTGTGCATGTATGATATATATGGAGGTGGGTTGTGGCTCCTGCAGTATTAATGTAAAAAATTGTTACATCTAAAGTGTGAACTGTGAAGAGTCATTTTTTTTCTGAAATTGATAATACATTCATTTATTTTTTTGTTTTTTTTCCCACCAGGAACTAAAGAATATTTCAGAGAAATAATTACAGAATTTGACATTGATGCATCTTTTGTTGACTTCACAAAGCTGGAGGAGCTGAAAGCAGCTTTAAAACAAAATACAAAGGTACAGCGGAGAACATTTTTTCCAAGAATATACTGACGTCTTAAAATGTTTCTTTGACATTTTTGAAAATCCACATTTAAACCTTGATTTTTTTTTGTGTTAAACGTTACCACAGGGGTTTACCTCAGTAACTAAAATATGGTATTAAATATTCCCGTTATGACAGATGGTTTG[G/A]TTTGAAACCCCCACAAACCCTACATTAAAGGTTGTGGACATCCAGGCCTGTGCAGATATTGTGCATAAACACAACAAGGACACACTTGTTGTTGTGGACAACACATTCATGTCTCCCTACTTCCAGGTACACACACTTATTTTATGCACAATCATAAGCCAATGTTGCTTTTATCTAATCTATAAATCTAATTTGAATACATCAGGCAATATAAAGTTAGAAAGTACAATACTTGTTCCAGTTTTAAGAAATTCAAGGGCAAAGATATTTTTTTATACTGAAGCTAGATAAATATAAATAGAAAACTAAAATAATTAAAATAGAAATATTTCTTAAATATTTTTCATCCCTGAAACAGCGCCCCCTTGCACTTGGAGCGGACATCTGCATGTGCTCTGGAACAAAATATATGAATGGTATTAAGCTAATAATAGTATAAGTTAGATGCTTCATATCTAATTGAAATTGAACCGATTTGAAATAAAATGATTTGATGATTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11242
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000104200 | Essential Splice Site | 332 | 400 | 9 | 12 |
ENSDART00000136314 | Essential Splice Site | 336 | 404 | 9 | 12 |
Genomic Location (Zv9):
Chromosome 6 (position 37344953)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 37418711 |
GRCz11 | 6 | 37396605 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CATAAAAGGAMAACTTGAGCATGCCTCAACCTTCCTCAGCAATCTGAAGG[T/A]GCTCAAAAGCATCMTAYTGTTGAAAAATCTTTWACATCTTRTGTTTTTTT
Long Flanking Sequence:
TTAATAAATTTAGATCAATAGAAAATAACATATGATTTACTAACCAGTTCTTTTTTGGAATAATAGACGTATGTTCTTCTTATTATTCTTTTTGCTAAATGAAAAACAAATTTTGCCACAGAGCAAAGAAAAGATTTTTAGAGTAAGAAAGACCTCTACATAAAGAAACAATACTAGAAGAGATAGCTCCAATTACAGAGGCAACATGTCTTTATTATGAGTTTTGATCAGTTTAATGTGTACTTACTGAATAAAATTATGACATATTTAAAATCTAATTTCAAACTTTTTAACGATAGTGCCAATGTCAACATACCTGAGCTATTTCGCTAAAAATAACTGATATCAATTAACTTTTGGTATTTTTTTTTCTTCAGGTCTTCCTTCTCACCCTCAACATGAGCTGGCAAAAAGACAGTGCCGAGGCTGTTCTGGGATGGTCTCGTTCTACATAAAAGGACAACTTGAGCATGCCTCAACCTTCCTCAGCAATCTGAAGG[T/A]GCTCAAAAGCATCCTATTGTTGAAAAATCTTTAACATCTTATGTTTTTTTTGACTATGTTCTATTCTGAATTCCAGGTGGTTGCACTTGCTGAAAGTCTTGGTGGTATTGAGAGTCTAGCAAAGCTTCCGTAAGTACTGAGGTGCACTACTGAGAGGAATTTTCACTGAATATTGTGTTTATGAAAAGCATCTTTGTTTTTTTTTAATGAGTGTTTATGTGGGTGTTAGTTTTAAAAAGGTTTAAGAGTGCTCAGTTCGAATGACCACAAGGGGGCGCAAGCACTTTAATGTTTACCAACAGAAACGAGTCGACGCTTTTGATGCCTGAATATTTTGCATCCGATGTACGTTATTTAGCGAGAACTAATTAAACATTTCTTTAGGTCATACTATAATACTCGGCCTACAGTGTAAAAGCAAAGTTAAAATTGGTAATACAAGTCTCATGAAACGTCATTGTGTCAGATTTGAGATGCTTTTGTTCTCAAGTAATTTACAA
Associated Phenotype:
Not determined