ZMP
mat1a
Ensembl ID:
ZFIN ID:
Description:
S-adenosylmethionine synthase isoform type-1 [Source:RefSeq peptide;Acc:NP_956165]
Human Orthologue:
MAT1A
Human Description:
methionine adenosyltransferase I, alpha [Source:HGNC Symbol;Acc:6903]
Mouse Orthologue:
Mat1a
Mouse Description:
methionine adenosyltransferase I, alpha Gene [Source:MGI Symbol;Acc:MGI:88017]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa35458 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa2678 | Nonsense | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa35458
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000057869 | Nonsense | 56 | 390 | 3 | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 18684216)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 18504251 |
| GRCz11 | 13 | 18635243 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGGGTCGTTTGGCTAATTATTGTTGTTCTAATCATCAGAGACTGTCTGC[A/T]AAACTGGTATGGTGCTTCTCTGTGGTGAGATCACATCTCGGGCCAATGTG
Long Flanking Sequence:
GTGTCAGATTTAGTGAGTCTTAACTATAGGGGAGGCATTGAAACTCTTACACTAAACTGAAACATACACTTGAACCTTAATCAGAGTCCTTACATAACTTTGTTTTATAATAGTGTGCTTATGTTTACAGATAAAATCTGTGACCAAATCAGTGATGCAGTTCTTGACGCACACTTAAAGCAGGACCCGGATGCTAAAGTAGCCTGTGGTGAGTGAACAGTTTAATTGCAAACTAAATAAACACGTTTATGTTTTTATTTTTTGTATAAACATTGATATATTTGAAAGTCCACAGTCCAACAGTTGGTCAATCTTCACTTGGTTATCGAGTGACCATTTTTAGCACTTTCTATCTGTTAAGTTTAACGGCATTTAAATGAATAACATCTCTATTTCCAAATTCAATCTAGCAATGGGTTACACAGTGACAGTTTTTTTAATTTTTTTTTTATGGGTCGTTTGGCTAATTATTGTTGTTCTAATCATCAGAGACTGTCTGC[A/T]AAACTGGTATGGTGCTTCTCTGTGGTGAGATCACATCTCGGGCCAATGTGGACTACCAGAAGATTGTGCGAGACACCATAAAACACATTGGTTATGACAACTCTGAAAAAGGTCAGGATCGATACATATTTTGTTTTTCCGTGCATCATCCGTTAAATCTATTCACCAATTTTTATCACTTTTCACTCTTTTCTCTTCCCTGTTCAGGTTTCGACTATAAAACTTGCAATGTGCTGGTAGCTCTCGAGCAGCAGTCTCCTGATATAGCTCAGGGTGTCCATGTTGACAGGCATGAGGAAGATATTGGAGCTGGAGATCAGGTCTGTACACAAAAGAAATTCAAATGTGTTCAAATGGTTCATTTGTGATCAACCTGTTCATGTTGGATTTCTGTTCTGTTTTAGGGGCTCATGTTTGGCTACGCCACTGATGAGACAGAAGAGTGCATGCCTCTCACCATTGTCCTTGCTCACAAACTCAATTCAAAAATGGCTGAGCTG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2678
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000057869 | Nonsense | 260 | 390 | 7 | 9 |
Genomic Location (Zv9):
Chromosome 13 (position 18680163)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 13 | 18500198 |
| GRCz11 | 13 | 18631190 |
KASP Assay ID:
554-2509.1 (used for ordering genotyping assays)
KASP Sequence:
AGAGTAAAATAATCTCTTTTTNCCAGGGAGATGCTGGTGTTACAGGAAGG[A/T]AGATTATTGTGGACACATATGGTGGATGGGGAGCTCATGGTGGTGGYGCC
Long Flanking Sequence:
ATCCACTGCATAAAACATATACTGGAAAAGTTGGTGGTTCATTCAGCTGGGGTGACCCCAGATTAATAACGAGACTAAGCCGAAAAGAAGATGAATGAATGAAGAACTTGATTAGATTGTTCGGGTGTTTAAAACTGTTGAAATTGAACCCAGTAGGACTTTGGACCTCAGGGAACAGATTTAGGGACTAGGGCAGGAGGTTTGCAAAATAAATTAATTCATCCTTTTAAAATTTCACAGAATTAATCATTTATTTTATTCATGCTTGTGCATAGTGATTGGAAGTTGTAAGTTTCCTTTGGACGTTTCAATCTAGTCCACTTTTTTTTTTATTAAATGCCACTGCATATTTACATCAGCGGAACATATTTAACAGCTGGTTGGAAATATTTAACTCAGAACTGCAAAAAGATTGCAGTTTACCAGTATTGTTGGAAACCATTGATTTAAAGAGTAAAATAATCTCTTTTTTCCAGGGAGATGCTGGTGTTACAGGAAGG[A/T]AGATTATTGTGGACACATATGGTGGATGGGGAGCTCATGGTGGTGGCGCCTTCTCTGGAAAGGACTACACTAAGGTGGATCGTTCTGCTGCCTATGCTGCTCGCTGGGTAGCGAAGTCTCTGGTGAAGTCCAAACTGTGCAGAAGAGTGCTGGTTCAGGTGAGACAAAATAATTTTGAGCCATTGCCTTGTGTCTGGACAAAAATGTTGATTCAAGCAACACACCAAATTACTGTCCAATTTTATCTGACTTGGTTAAACTGGAATGGGTGAGCTGGTTTCTGGTAAGGGTCACGAATAATATATTTGCTGTGTAGGTGTCTTACGCCATTGGAGTCGCCCACCCACTCTCAATCTCCCTCTTCACCTACGGCTCATCGGAAAAAACAGAGAAGGAGTTGCTACATATTGTCAACAAGAACTTTGACCTCCGACCAGGTGTCATTGTTAGGTAATCAATTAATAAGATAATATGTTCTTTTAATGTTCTCCAAATTCAGG
Associated Phenotype:
Not determined