ZMP
tmtc1
Ensembl ID:
ZFIN ID:
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:A5WW25]
Human Orthologue:
TMTC1
Human Description:
transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:24099]
Mouse Orthologue:
Tmtc1
Mouse Description:
transmembrane and tetratricopeptide repeat containing 1 Gene [Source:MGI Symbol;Acc:MGI:3039590]
Alleles
There are 7 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa13541 | Essential Splice Site | Available for shipment | Available now |
| sa20209 | Nonsense | Available for shipment | Available now |
| sa18061 | Essential Splice Site | Available for shipment | Available now |
| sa26220 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa26221 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa33390 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa13541
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092013 | Essential Splice Site | 163 | 872 | 2 | 20 |
| ENSDART00000142892 | Essential Splice Site | 163 | 412 | 2 | 9 |
Genomic Location (Zv9):
Chromosome 4 (position 8476646)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 9404154 |
| GRCz11 | 4 | 9405070 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTCCTCACCGCACTGCTKTTCTCTGTGCACCCCATTCACACTGAAGCTG[T/A]GAGTCTGCCAATACRACTAATACTAATATATGCATTACTAGTTATGTCTG
Long Flanking Sequence:
ACACCAACTAAACATCATTGCTCATCATGGTCACAAACTAAGGTTAACATGGAAATTTGATCCAGGTTTAGACATACTCTAGAGCTTGTAACATGTAGACCGATTAGCTGCAAAGTCAGTCAAGTTTCTGTTTAGTTTAGACCAATTCTGCATTTTAGGTACCATGAAGGCAGCTCAGCTTCTCCATAATACCATGGCAACCAAGACTGATTACAGTCAAGCTGACTTCATGTTATCTAAAACCCATGGTTGGTGCAAACTAAACTGATCCAGCTTCATGCTACAGGCCCCTGCTCTTACTGATGCCATTCTCTTTTTCAGGTTGAACATTTTGCTGGGCGGCTTGACTCCATTTTTCTTCCACCTGGTGAATGTGTTCCTGCACTGCGTGGTGACAGCGCTGCTCATGTACACCTGCCAGCAGTGTGTGTTCGAGGACAGCAACTTCTCCTTCCTCACCGCACTGCTGTTCTCTGTGCACCCCATTCACACTGAAGCTG[T/A]GAGTCTGCCAATACGACTAATACTAATATATGCATTACTAGTTATGTCTGATTTATCTGTCTGCTTCTATCCATCCATCTATCCATCCTTCTATCCATCCATAGCAGGGATCATCAAACTTGTTCCTGGAGGGCCGGTGTCCTGCATATTTTAGCTCCAACTCTATTCACACACACCTGAACAAGCTAATTAAGGTCTTACTAGGTATACTTGAAACACCCATGAAGGTGTGCTGAGGCAAGTTGGAGCTAAACCCTGCAGGCCACCAGACCTCCAGGAACGAAATTGGTGACGCCTGATCTATCGTATGTCCATTCATCCATTTATCCGTCTTTCCATATTATATCCATCCATCCATCCATCCATCGTATGTCCATCTATTCATAGTATGTTTATTCATCCGTCTGTCCATCCATCGTATGTTTATCCATCCATCCATTCATCCATTCGTAGTACGTCCATCCATCCATCCTTCCATCGTATGTCCATCCATCCATAGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20209
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092013 | Nonsense | 288 | 872 | 6 | 20 |
| ENSDART00000142892 | Nonsense | 288 | 412 | 6 | 9 |
Genomic Location (Zv9):
Chromosome 4 (position 8500515)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 9428023 |
| GRCz11 | 4 | 9428939 |
KASP Assay ID:
2259-4517.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTTCTTCAGGTTACAGTCATCATGTCTGTCCGCTTATGGCTGATGGGT[G/T]GATCCATGCCGCTGTTCTCCGAGCAAGACAATCCTGCATCCTTCTCTCCA
Long Flanking Sequence:
ATTAACCGTTAAGAATACGGCAGAATGTTTTTCAGTTTACGGTCACAAAAACGTTAAAAATACAGTAGAGGTGTTTTTCAGTATATGGTGTATAGAATGTATGTGTTATAAATTTATGGAGATTTTTATTTAAATTTTTTTTATAACTTGATTTTCTTCTTTTTTTTGTTATATTTGCAGATTTTTTTTAAGGTAGATCTTATTTTTATTTTCTAATCTAGTCTAAAATGTTCATGGGAAAATAAAAAGGAAATTTTTGTGCTACAAAATCACGTTTTACAGGTTTTCATTCCACATGTGTTTCATACGTACATTTTTTTTTTGTTTGTTTGTATGATGAAAAGTCACTTAGTTTTCATTTAAATCATTAGCATTTCTATCACATGTGCTCAAAGCCCCACTGACTCCCTGTGCTGACTGGCTGTGAGTTTCACAAGTATATTTACTGCTCTTTTCTTCAGGTTACAGTCATCATGTCTGTCCGCTTATGGCTGATGGGT[G/T]GATCCATGCCGCTGTTCTCCGAGCAAGACAATCCTGCATCCTTCTCTCCATATCTGCTCACCAGGTCTGTCTCAATGCCATCCCTCACATATCTTCATCTTAAAAGATTTAACACAAAAAAAAGACAATGTGTTTTCTTGCACTGGAGACTATAAAGGCTGCAACGGGATTCAGAATCAGCCTGCAGTCTGAAATGCACACAAAAGCAGGAAAACCTTGACATTTCCTCCCATACATGAACTACAGAGGGAGAACTGATGTTTCACTTTTACTAGTAAAGCAGTTTCATGTGTGTTACGTACTGTGCAGTAAATGCCAACGTTTATAACAAGTTTCTTCTGCAACCTTCGCTTCCTTCCCTGTGTTCATCACATAATCAGCCAGCAATTGTGATGCAGGACATTGAGCAGAAAGATAAAGCAGTTTTGGCTCTGCTAAAACACACTGTAATAATGAAATGGCCACCCATGAGTCCTGAACTAAACCTGATCCTATCTGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa18061
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092013 | Essential Splice Site | 372 | 872 | 8 | 20 |
| ENSDART00000142892 | Essential Splice Site | 372 | 412 | 8 | 9 |
Genomic Location (Zv9):
Chromosome 4 (position 8501373)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 9428881 |
| GRCz11 | 4 | 9429797 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGGCTCTTGTCATGCTGGCATTRAGCCTGAACTGTGTTACATGCCTACAG[G/T]TGAGCGATTGAACGCACACATTTCCAMGTGACAAGACAACCTCTGAGAGT
Long Flanking Sequence:
CCCTGTGTTCATCACATAATCAGCCAGCAATTGTGATGCAGGACATTGAGCAGAAAGATAAAGCAGTTTTGGCTCTGCTAAAACACACTGTAATAATGAAATGGCCACCCATGAGTCCTGAACTAAACCTGATCCTATCTGGGAAATCTTTGGTGATAGAGAAACACTCGAGTATTGTGGAAAAGCCTGAAAATTTGTATCTTTTAGTAAACATTTCTGTCTTTTTTAGGTTCCTCACATACTGCTATCTGCTCGCTTTCAACGCCTGGCTCCTGCTGGCTCCCATAATGCTTTGCTACGACTGGCAGGTAAACGACAACCACAGAAAAACCCTGCTGTCGCTTCATCTGAGTGAGCGTTTGCTTGACTGCGTGACTTCTGATCGGCAGGTGGGCAGCATTCCTTTAGTGGAGTCTCTGTGGGACGGACGCAATATTGCCTCGCTGACTTTGGCTCTTGTCATGCTGGCATTGAGCCTGAACTGTGTTACATGCCTACAG[G/T]TGAGCGATTGAACGCACACATTTCCACGTGACAAGACAACCTCTGAGAGTTCATCTCCACAGACTCGCTCTGTCATCATTTATGAAAAACACACACGTTTCCCCAGTTTCAGGAGACATAAAAGACTCGCTCTGTCTCATGCTTTTCTGTGCTGTCGGTTTCTTCCACTCCCAGTGCAATTCTTCTCGACTCGACGCCATTGCAACCTGTGAAAAATAGCAGCAGTGGTGTAAATCAGTTCAAACAGCCACCTAAGGCAGATGTTGCGCATAGGTTACACATGAAGAGAGATGTGAGATTCTTTTATATTTAGCAGGCTGTTCAGTTTCTGCTCTGACTGGCTGTAACAGTTCTTAATATATTATTTTTAAATGGCATATGAATGGGATTTCAGAACTGTGCTCAAAGTATTGCGCACTGTTTATAAATATTTATTAGCTCGGGTTGGGTTAAATCATGTAAGTTATGCCACAGCCTTATCACCCTGCAGCCCAAGACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa26220
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092013 | Essential Splice Site | 507 | 872 | 11 | 20 |
| ENSDART00000142892 | None | None | 412 | None | 9 |
Genomic Location (Zv9):
Chromosome 4 (position 8519654)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 9446906 |
| GRCz11 | 4 | 9447822 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAAAGGGCGAAACCAAGAAGCCATTTACCACTATAAAACAGCCCTCAGG[T/G]ACTGTAAATCCGTGTACGTGATGCTAAACAAAATATTTAGAGAAAATAAC
Long Flanking Sequence:
GGGCATCCACTGCGTAAAACATATGCTAGATAGGTTAATATATTAATATAAATATTAATCAAGGGACTAAGATGAAAAGAAAATGAATGAATGAATCTGGGAAGTTTAGTGTTTGCAAATGTTGATGAAACTTTTTGATTCATTTCAGGAGGAAATTAATTATTTAATTAATTATTTAAATCTAATATGTAAATATAAATGTAATTAAAATATACACAGAAAAATTAATAATTTCTGACACATGATTGTGTAATTTGGATGGTAAGACTGAAAACGCACTTTACGAACAGCCAATTGACTGTAGCATAATATTTGCCTGCAATTTTTTGTCGTTAAATGGCGAATAGATAAAGCATTTTCTTCTGTTCCCTTCTCCCTCCATCAGGTCTGGCATTCAGACTTTACCTCACAATGCTAAAGTACATTACAACTATGCCAATTTCCTGAAGGACAAAGGGCGAAACCAAGAAGCCATTTACCACTATAAAACAGCCCTCAGG[T/G]ACTGTAAATCCGTGTACGTGATGCTAAACAAAATATTTAGAGAAAATAACTTAACACCTATGTTTTTTTTCATACATTTATAATTAACATGAACTATGATTATAACTCTTGTTTAAAAATATTAACGCAACACTTAAGAAAAGGGAGCAATTTTCACTATAACTAGTGGTTTATTACCTGCCTATTATTAGGATTTTGGCTCTTTATTACTAATTAATAAGAACATATTCTGCACAGTCTTATTCTACACCCCTACCCAATACCTAAACCCAACTACTACCTTAATCACTATCAATAAGCTGCAAATTAGCAGTTTAAATTTAGCAGCAGAGCTAAAAGTCATAGTTAATGCTATGTTAGTAAACCGTAAATAATGATTCATTGGATTTTTTAAGTGGTTGAAAGCTATTTATACGGGCTGAATTTAAACAAACAAATAAAATTTAGCAATGTTCAGCTTAATTTGTTTAAATTCAGCCTATAAAGGGTTTGAGTAAATC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa26221
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > G
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092013 | Essential Splice Site | 592 | 872 | 14 | 20 |
| ENSDART00000142892 | None | None | 412 | None | 9 |
Genomic Location (Zv9):
Chromosome 4 (position 8521131)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 9448383 |
| GRCz11 | 4 | 9449299 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGCCTTTTACGCTGATGTTTACCCTGTTATACTTTTTTTTGTGTGTGTGT[A/G]GGGACACTCAAAAGAAGCGAATGAGATTTATACCAAGGGTATTGAGAACT
Long Flanking Sequence:
GGTGGTAGAACGGATGAAAAATATTGTGTGATGTAGTGGTTCACTGAACTTATTTTCGTGCCACTGCTTTAAATTTAAGACTCAGCCAGTATATGTGTGTCTATGTCACAATATAAGAGATTTTTACGATTACAGTGACCACTTTCGCAAACATCAGAACTCCAACTATTTAATTATGACTATTATTTTGAAAAATGGTGCTGTTCAAAAAGGCTATTTGTCAGCTACCCAAGTACATTATGAGGAAGAAGATGATGATGATGATGTTGTTTTCCAGATCTCAGGGGAAAGAGGAAGAGGCGGAGCGCATGCTGAAAGAATCGATTCGGTTCGGCCCTCATTTCGCAGATGCGTACTCCAGTCTCGCCTCTCTATATGCTGACCAGGTCTTGTTCTCTGTTCTTGTTTCGATAAATGACACTCATGTGAAGTGATTGTTAGACACCTCATAGCCTTTTACGCTGATGTTTACCCTGTTATACTTTTTTTTGTGTGTGTGT[A/G]GGGACACTCAAAAGAAGCGAATGAGATTTATACCAAGGGTATTGAGAACTGTCCTGAAAGTTCTGACCTACATAACAACTATGGCGTGTTCCTGGTGGACACAGGTAAATAAATTGTCGCTTAAAGTTCTTGAAAGTAAATGAACTAACAAACAAAAACACATTACTGTGGCTTTAATAGGGTTTTGCGTCATGTTCGGTTTCTTGAATGTTACGTGTAGTGTGCAGAGGTCAGAGCCAGGTAGAAGTCGCCAGGTCCCACATATAAAATTGATACATGGCAATATATGCAAATAACATATGACATACAATTTCATAGTTGGATTTTAAATATGTAAAATATTGCAAAAATTGTTGTTTATTTTTTTGTTTTAACCATTGGAATTAAAAATATGTTCATATATGCTCTATAATTGTATGAATGTGTTCATATATGGCCGTATAGATCATATTTAAACAGATATGTGTACTTATTTGTAATTTCAATGGTTGATTATACAG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33390
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000092013 | Essential Splice Site | 719 | 872 | 16 | 20 |
| ENSDART00000142892 | None | None | 412 | None | 9 |
Genomic Location (Zv9):
Chromosome 4 (position 8522751)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 4 | 9450003 |
| GRCz11 | 4 | 9450919 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAGGCGTCCACACTGCAGCCTGACAGCACAGATATCTGGCTAGCCCTG[G/T]TGAGATTACACTCAAACGTTAGCCTAAAAAAAACATCCCATCACTTCATA
Long Flanking Sequence:
TGGGGATCGTGCGGCCTTTCATTACCAGGAAGCTGTGCGTCTCAAGCCAGCTCATTATGTTGCCATGGTGAACCTGGGTCGTCTTCTCCGCTCATCCAATGATAATAAAGAGGCAGAGCTGTGGTACAAAAGGTAAAACGAGATCAAATGAAACTGAATAGTTTATACAGTGTATCCAGCTTACACACCTGTGAACTAAACCACAGGTGTGCGTGCATGCGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCACACAGGGCCCTGCAAGTGGTCCGTAAAGTGGATATCCTGACTCCTCTGGGTGCTTTATACTACAACACAGGTAGATATGAGGAGGCTCTGGAGGTTTACAGAGAGGCGTCCACACTGCAGCCTGACAGCACAGATATCTGGCTAGCCCTG[G/T]TGAGATTACACTCAAACGTTAGCCTAAAAAAAACATCCCATCACTTCATATCTTAATCTTTTTCCAGTTTATCCGGTTATTTTCGATGTTTTCATAACAGTGCGTCCGCTTTTTTTTTGCGATGCTGGTTCTGACAGTATGTGTCAAATATAGCAATGCTGGCAATATATGTCAAACATCAGTGGTGCTCAAGCCTGTTCCTGGAAATCTACCATCCTGCACAGTTCAGCTCCAATCCCAATCCAACACACCCGAACAGCACTTGATAATCACAGACAGGTGTGTTTGATATGGGTTGCAACTTAAATCTGCAGGAAGGTAGAGCTCCAGGAACAGGGTTGAACACCTGTCATATAAAGACAACATATATTTAGAAATATTGCAAAATATTGCCATTTCATATATTTTTTTAACCATTTGAGTTTTAAATATGTACATATATACTTAAATGTATTAGCTATAATGTTATATACATGTTTATATATCTAGTATATTTGAAC
Associated Phenotype:
Not determined