Busch Lab

ZMP

tmtc1

Ensembl ID:
ENSDARG00000063149
ZFIN ID:
ZDB-GENE-070705-219
Description:
Novel protein [Source:UniProtKB/TrEMBL;Acc:A5WW25]
Human Orthologue:
TMTC1
Human Description:
transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:24099]
Mouse Orthologue:
Tmtc1
Mouse Description:
transmembrane and tetratricopeptide repeat containing 1 Gene [Source:MGI Symbol;Acc:MGI:3039590]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa13541 Essential Splice Site Available for shipment Available now
sa20209 Nonsense Available for shipment Available now
sa18061 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa13541
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000092013 Essential Splice Site 163 872 2 20
ENSDART00000142892 Essential Splice Site 163 412 2 9
Genomic Location (Zv9):
Chromosome 4 (position 8476646)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 9404154
GRCz11 4 9405070
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTCCTCACCGCACTGCTKTTCTCTGTGCACCCCATTCACACTGAAGCTG[T/A]GAGTCTGCCAATACRACTAATACTAATATATGCATTACTAGTTATGTCTG
Long Flanking Sequence:
ACACCAACTAAACATCATTGCTCATCATGGTCACAAACTAAGGTTAACATGGAAATTTGATCCAGGTTTAGACATACTCTAGAGCTTGTAACATGTAGACCGATTAGCTGCAAAGTCAGTCAAGTTTCTGTTTAGTTTAGACCAATTCTGCATTTTAGGTACCATGAAGGCAGCTCAGCTTCTCCATAATACCATGGCAACCAAGACTGATTACAGTCAAGCTGACTTCATGTTATCTAAAACCCATGGTTGGTGCAAACTAAACTGATCCAGCTTCATGCTACAGGCCCCTGCTCTTACTGATGCCATTCTCTTTTTCAGGTTGAACATTTTGCTGGGCGGCTTGACTCCATTTTTCTTCCACCTGGTGAATGTGTTCCTGCACTGCGTGGTGACAGCGCTGCTCATGTACACCTGCCAGCAGTGTGTGTTCGAGGACAGCAACTTCTCCTTCCTCACCGCACTGCTGTTCTCTGTGCACCCCATTCACACTGAAGCTG[T/A]GAGTCTGCCAATACGACTAATACTAATATATGCATTACTAGTTATGTCTGATTTATCTGTCTGCTTCTATCCATCCATCTATCCATCCTTCTATCCATCCATAGCAGGGATCATCAAACTTGTTCCTGGAGGGCCGGTGTCCTGCATATTTTAGCTCCAACTCTATTCACACACACCTGAACAAGCTAATTAAGGTCTTACTAGGTATACTTGAAACACCCATGAAGGTGTGCTGAGGCAAGTTGGAGCTAAACCCTGCAGGCCACCAGACCTCCAGGAACGAAATTGGTGACGCCTGATCTATCGTATGTCCATTCATCCATTTATCCGTCTTTCCATATTATATCCATCCATCCATCCATCCATCGTATGTCCATCTATTCATAGTATGTTTATTCATCCGTCTGTCCATCCATCGTATGTTTATCCATCCATCCATTCATCCATTCGTAGTACGTCCATCCATCCATCCTTCCATCGTATGTCCATCCATCCATAGT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa20209
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000092013 Nonsense 288 872 6 20
ENSDART00000142892 Nonsense 288 412 6 9
Genomic Location (Zv9):
Chromosome 4 (position 8500515)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 9428023
GRCz11 4 9428939
KASP Assay ID:
2259-4517.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CTTTTCTTCAGGTTACAGTCATCATGTCTGTCCGCTTATGGCTGATGGGT[G/T]GATCCATGCCGCTGTTCTCCGAGCAAGACAATCCTGCATCCTTCTCTCCA
Long Flanking Sequence:
ATTAACCGTTAAGAATACGGCAGAATGTTTTTCAGTTTACGGTCACAAAAACGTTAAAAATACAGTAGAGGTGTTTTTCAGTATATGGTGTATAGAATGTATGTGTTATAAATTTATGGAGATTTTTATTTAAATTTTTTTTATAACTTGATTTTCTTCTTTTTTTTGTTATATTTGCAGATTTTTTTTAAGGTAGATCTTATTTTTATTTTCTAATCTAGTCTAAAATGTTCATGGGAAAATAAAAAGGAAATTTTTGTGCTACAAAATCACGTTTTACAGGTTTTCATTCCACATGTGTTTCATACGTACATTTTTTTTTTGTTTGTTTGTATGATGAAAAGTCACTTAGTTTTCATTTAAATCATTAGCATTTCTATCACATGTGCTCAAAGCCCCACTGACTCCCTGTGCTGACTGGCTGTGAGTTTCACAAGTATATTTACTGCTCTTTTCTTCAGGTTACAGTCATCATGTCTGTCCGCTTATGGCTGATGGGT[G/T]GATCCATGCCGCTGTTCTCCGAGCAAGACAATCCTGCATCCTTCTCTCCATATCTGCTCACCAGGTCTGTCTCAATGCCATCCCTCACATATCTTCATCTTAAAAGATTTAACACAAAAAAAAGACAATGTGTTTTCTTGCACTGGAGACTATAAAGGCTGCAACGGGATTCAGAATCAGCCTGCAGTCTGAAATGCACACAAAAGCAGGAAAACCTTGACATTTCCTCCCATACATGAACTACAGAGGGAGAACTGATGTTTCACTTTTACTAGTAAAGCAGTTTCATGTGTGTTACGTACTGTGCAGTAAATGCCAACGTTTATAACAAGTTTCTTCTGCAACCTTCGCTTCCTTCCCTGTGTTCATCACATAATCAGCCAGCAATTGTGATGCAGGACATTGAGCAGAAAGATAAAGCAGTTTTGGCTCTGCTAAAACACACTGTAATAATGAAATGGCCACCCATGAGTCCTGAACTAAACCTGATCCTATCTGGG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa18061
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000092013 Essential Splice Site 372 872 8 20
ENSDART00000142892 Essential Splice Site 372 412 8 9
Genomic Location (Zv9):
Chromosome 4 (position 8501373)
Other Location(s):
Assembly Chromosome Position
GRCz10 4 9428881
GRCz11 4 9429797
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGGCTCTTGTCATGCTGGCATTRAGCCTGAACTGTGTTACATGCCTACAG[G/T]TGAGCGATTGAACGCACACATTTCCAMGTGACAAGACAACCTCTGAGAGT
Long Flanking Sequence:
CCCTGTGTTCATCACATAATCAGCCAGCAATTGTGATGCAGGACATTGAGCAGAAAGATAAAGCAGTTTTGGCTCTGCTAAAACACACTGTAATAATGAAATGGCCACCCATGAGTCCTGAACTAAACCTGATCCTATCTGGGAAATCTTTGGTGATAGAGAAACACTCGAGTATTGTGGAAAAGCCTGAAAATTTGTATCTTTTAGTAAACATTTCTGTCTTTTTTAGGTTCCTCACATACTGCTATCTGCTCGCTTTCAACGCCTGGCTCCTGCTGGCTCCCATAATGCTTTGCTACGACTGGCAGGTAAACGACAACCACAGAAAAACCCTGCTGTCGCTTCATCTGAGTGAGCGTTTGCTTGACTGCGTGACTTCTGATCGGCAGGTGGGCAGCATTCCTTTAGTGGAGTCTCTGTGGGACGGACGCAATATTGCCTCGCTGACTTTGGCTCTTGTCATGCTGGCATTGAGCCTGAACTGTGTTACATGCCTACAG[G/T]TGAGCGATTGAACGCACACATTTCCACGTGACAAGACAACCTCTGAGAGTTCATCTCCACAGACTCGCTCTGTCATCATTTATGAAAAACACACACGTTTCCCCAGTTTCAGGAGACATAAAAGACTCGCTCTGTCTCATGCTTTTCTGTGCTGTCGGTTTCTTCCACTCCCAGTGCAATTCTTCTCGACTCGACGCCATTGCAACCTGTGAAAAATAGCAGCAGTGGTGTAAATCAGTTCAAACAGCCACCTAAGGCAGATGTTGCGCATAGGTTACACATGAAGAGAGATGTGAGATTCTTTTATATTTAGCAGGCTGTTCAGTTTCTGCTCTGACTGGCTGTAACAGTTCTTAATATATTATTTTTAAATGGCATATGAATGGGATTTCAGAACTGTGCTCAAAGTATTGCGCACTGTTTATAAATATTTATTAGCTCGGGTTGGGTTAAATCATGTAAGTTATGCCACAGCCTTATCACCCTGCAGCCCAAGACAG
Associated Phenotype:
Not determined