Busch Lab

ZMP

grin2ca

Ensembl ID:
ENSDARG00000078149
ZFIN ID:
ZDB-GENE-070822-3
Human Orthologue:
GRIN2C
Human Description:
glutamate receptor, ionotropic, N-methyl D-aspartate 2C [Source:HGNC Symbol;Acc:4587]
Mouse Orthologue:
Grin2c
Mouse Description:
glutamate receptor, ionotropic, NMDA2C (epsilon 3) Gene [Source:MGI Symbol;Acc:MGI:95822]

Alleles

There are 8 alleles of this gene:

Allele Name Consequence Status Availability
sa14471 Nonsense Available for shipment Available now
sa19980 Essential Splice Site Available for shipment Available now
sa31320 Essential Splice Site Available for shipment Available now
sa31319 Nonsense Available for shipment Available now
sa31318 Essential Splice Site Available for shipment Available now

Mutation Details

Allele Name:
sa14471
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
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Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110554 Nonsense 245 1400 2 12
ENSDART00000145215 Nonsense 245 1400 3 13
Genomic Location (Zv9):
Chromosome 3 (position 18890892)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 18919254
GRCz11 3 19068994
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATCGACGCGCAAGTGCTGCTGGTTTACTGTTCTCACGATGAGGCCCAGTA[T/A]CTTTTCTCCATGGCCAGGGAAGTGGGTCTGGTTGGTCCAGGCTACATCTG
Long Flanking Sequence:
AATGTAATATATTAAGATATTTTGATCATAATATAAAACATCATTTGGGGGACTCTTGAATCCATTTTGTTTCAGCTGATTTCTAGAGCCAGTTAAATTGAGTGAAATTTCTCCAATCTTGAAGTGGATGTTTATTTGAAGTGTCTTATGTAGAAATGCTTCTGATCTCTGTTTGTCCCGTGTCTCTCGCAGGGTGACGGCTCTACTTTCCTCCAGCTGGGCTCCTCCATCGAACAGCAGATCAACGGCATGTTCAAGGTAATGGAGGAGTACAACTGGGACAGTTTTGTGGTGGTAACCAGTCTATACCCGGGCTATGACACCTATGTGGACTACATCCGCTCCTTCATCGACACCTCGTATTTCCTGTGGGAGCTGCAGGACACCTTGACGTTTGACATGTCGGCGGACGGCATGAATGATCTCCGTGCACGTCGGTTATTACAACAGATCGACGCGCAAGTGCTGCTGGTTTACTGTTCTCACGATGAGGCCCAGTA[T/A]CTTTTCTCCATGGCCAGGGAAGTGGGTCTGGTTGGTCCAGGCTACATCTGGTTTATCCCTAGCCTTGCGGTGGGAAACCCCAATATTGCGCCCCCAGACAGCTTCCCAGTGGGACTGATTAGCATCATCACCGACCGCTGGAAGATGAGCTTGAGGAACAGAGTCAGGGATGGAGTGGCAATCGTGGTGAAAGGAGTGGAGAGTTTTCGCAAACAGAGAGGCTTCATTCCTGATGGACACATGGACTGTTTGAGTCCCATCCGGCCGGCCAGCAATGGCACGCTCTACAGGTGGGTTTTACTTTTTTGGTGACACTAACACTACCGTGTAAGTTCTATAAGTGCTATAATTCTGGCTGAATAAATTCTGGCCAGTACTTCTTATTGTCATGGAGGTTTAGGTGCACTTACAGCATGTCTGAATTCACTTTTGCTATTTTAAAGACAGGAAAAATGGTTGGTGCATCTGGTGAATGGTGTAAAAGTGTTGTCTTTATTGTC
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa19980
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110554 Essential Splice Site 342 1400 3 12
ENSDART00000145215 Essential Splice Site 342 1400 4 13
Genomic Location (Zv9):
Chromosome 3 (position 18877248)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 18905610
GRCz11 3 19055350
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTGATATTCTACAAATATCATTTAGAAAACATCTGTCTGATTTTTTGC[A/T]GGCATATGCTGAATGTGTCGTGGGAGAACACTGATTTCTCCTTCAACAGT
Long Flanking Sequence:
ACATGCGGTACAGGTGAATTGGGTAGGCTAAATTGGTCGTAGTGAGTGTGTGTGTGCGTGTGGATGTTTCCCAAAGATGGGTTGCAGCTGGAAGGGCATCCACTGTGTAAAAACGTGCTGGATAAGTTGGCGCTTCATTCCGCAGTGGCGACCCCAGATTAATAAAGGGACTAAGCCGACAAGAAAATTAATGAATGAATATAATTACTCCACAATAGTTGAGAACTCACATACTGTATTTGTCATGAGCACTTTCTTTTGCATTCACGGGTATGCGTTGAACTCAACAGCCCCCAAAGAATGCACCTGCTTCAGTATAAATTACTGATTTAAAACGAGTCCGCTGCGGAAAAGTTGTTAGTTTAGTCTTTTATTTTGTGGTTGGTCATTTGTTCTGGGAGACTTGTATGCTTTCATCTGTGAATCATAATTGATTTGATGTTAATTAATTATTGATATTCTACAAATATCATTTAGAAAACATCTGTCTGATTTTTTGC[A/T]GGCATATGCTGAATGTGTCGTGGGAGAACACTGATTTCTCCTTCAACAGTGATGGATATCTGGTCAACCCTTCAATGATCATAATCACTCTGGACCGTGGGAGACAGTGGGATAAGGTAAGGATGTTTTTTGTGCTTGTACAATTGAATTTCCTTCTGCCATACTCTATTCAAAAGGTTGCACCTCCAATGGCATCATCAATTTTAACGCGCCTCCGCAGGTTTCATTGCCCTCAGGGTAGTTGTGAGTCAAAATGCCACAGACAAACAGCATGTGTACCTCAGTGTTATTCATCTGAAATATGTCAACTTCCACTTTTTATTTTCAGAAAATGGAACATAAAATTAAACATTTATGTTTCTTACCGGAGCTGGACGGCATCTTCTGTGCATCATCTGGTTTTATGACCAAAGCATTCTCTGATGGCCTGCATTTTTATTGTGGTCAACATAAATTATAGCATATAGTATATCTGCTGCATTTTTACATGTCAGTGATAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31320
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110554 Essential Splice Site 451 1400 5 12
ENSDART00000145215 Essential Splice Site 451 1400 6 13
Genomic Location (Zv9):
Chromosome 3 (position 18845308)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 18873670
GRCz11 3 19023410
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATTATGATCGACTTGCATGAAATGATCAATTTTCCATTGTGTTCCCACA[G/A]TATAGTCGGACACACAGAGCCTTACACCAAACTCTGCTGCAAAGGCTTCT
Long Flanking Sequence:
TTTATTTTAAAAATATATCCTAATAGTTTCTTTAATTTGTGATTTGCAGGTTTTGTTTTAATTTATCTACCGTTTTTACAAATGTCTTTTATTGACATTTCTAAACTTTCCAACATCAAAACTTGTTGGAAGAAAGATCAAGATCTCATAATGCAATAAAACAAAAACATGAATTACAAAATACATTTATTCATAATATTCCTTTGGCTTAGTCCCTTATTTTTCAGGGGTGGCCACAGCGAAATGAATCGACAACTATTCTGGCATAATTTTTTTACAAAGCAGATGCCCGTTCAGCCGCAACCCAGTACTCGGAAACATTACAAAATACAGTAAACTGTTAATTTGCAGACATTTTTGTACAGCACCTAAGTTAAACTAGCAGTGTGCAGATTGATGACATCTGAAATTAAACATTTATTTTGAAATGATATTTAATGTTTTTATTGCTATTATGATCGACTTGCATGAAATGATCAATTTTCCATTGTGTTCCCACA[G/A]TATAGTCGGACACACAGAGCCTTACACCAAACTCTGCTGCAAAGGCTTCTGCATAGACATCCTGAAAAAGCTCTCTCGCAACATCAAGTTCTCCTATGACCTCTACCTGGTCACCAACGGCAAACATGGCAAACTGGTACGAGGAATCTGGAACGGGATGATCGGAGAGGTAAGACAACATTTCAGTTTAGTTTTCAAGTCAACAAAAAGACTTTATTTACTTCTTTAAAGGGACACAAAAATCTGTTGAACACAAAAGAAGATATTTTAAGGAATGTTGGAAACCGGTAACTTTCTAACGGGTATTTTTTTAAACAATAGATTTCAACATTCTTCAAAATATCTTCTTTTATGATCAACAGAAATGAAAAACTCACATTTTCGTAACCACTTGAATGCAAAAGGAAAATTATAATTTTGGCTTGGCATTTCTGGCCTGGTCTTGCTGCACTACAACACGTTCTTATTTATTTATTTACGTTGCTCCACCAACAAAATAT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31319
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110554 Nonsense 614 1400 8 12
ENSDART00000145215 Nonsense 614 1400 9 13
Genomic Location (Zv9):
Chromosome 3 (position 18835448)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 18863810
GRCz11 3 19013550
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCCATTTCAGATCCAGGTGGTCCGACGTTCACCATTGGGAAGTCGGTCTG[G/A]CTGCTGTGGGGGATCGTCTTCAACAACTCAGTGCCCATCGAAAACCCCAA
Long Flanking Sequence:
AACAAATGTATATGATAATTTTCATTACTACAGTAAAGATAAAATAAATCAATTATACGAAATGAGTCATTAAATCTGTTCATAAATGTGTTGAAAAAAAATCTTCTCTTCGTTAAACAGAAATTGACAAAATTAAAACAAAATTCAGGGGGGCTAATAATTCTGACTTTAACTCTACGTTTGTTCTGTAGACAATCGAAAAAGTTATTGTTTTAGGGGGCTAATAATTTAGACCTTAAAATGTTTTTTTTTTTTTTTTTTACTAAAAACTGCTTTTATTCTAGCTGAAATAAAACAAATAAGACTTTCTCCTGAAGAAAAAAAAACTTAGCGAAAATACTTTGAAAGTATCCTAGCTCCATTAAAAATCATTTGAGAAACATGTTTTTTAACAGAATAAATATTTCAGAGAAGGGCTAATAAATTTACCCTCAACTGTATGTCATGACTTCCATTTCAGATCCAGGTGGTCCGACGTTCACCATTGGGAAGTCGGTCTG[G/A]CTGCTGTGGGGGATCGTCTTCAACAACTCAGTGCCCATCGAAAACCCCAAAGGCACCACCAGCAAGATAATGGTGCTGGTGTGGGCCTTCTTTGCTGTGATCTTCCTGGCAAGTTACACAGCCAACCTGGCAGCCTTCATGATCCAGGAGCAGTACATTGACACGGTTTCTGGACTCAGTGACAAGAAGGTAAGAGCTGCCAGAGTCTCTCACAGCCAAGTGGCCATTCAAGGGCAGCGGTTTTAATTAAACTCATCACCAGGCTGAACTACAAGGCAGTTTCACGCTGATATGATATATGGTTGCACTGGCATGATGGAATGCCGTGACGCTAATCGCTAATTTGTGTAACTTTAAAGAGACATTAATTGACTATTTGAAATATTAAGCCAGTTTTAGATGTTGCCAACATGACAAAGAGGTGTAAATCTAGGAAATGGTTTGGAATTTTAGTTTTTTCACTTTAATAAATGCTTGCTGACTTAATTTTTGTAGTTAAA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31318
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000110554 Essential Splice Site 731 1400 9 12
ENSDART00000145215 Essential Splice Site 731 1400 10 13
Genomic Location (Zv9):
Chromosome 3 (position 18831600)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 18859962
GRCz11 3 19009702
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AATACAACCAAAAAGGTGTGGAGGATGCTCTCAACAGCCTCAAAACTGGG[T/A]GCGTTTACTGTAAATTCTCACCTGAAACTCTAAAACAAATCCTTCCCTGA
Long Flanking Sequence:
ATTTTAGTCATATTCCCACTTGGATTTATGTTGTATTTAATGTGGCGTTTGCAGATACAGAATCGTGAGAATCCTTGGAACAGGCCGAAGACAAAGGCTGAACCCTACAATAAATTCCCATGCAGAAATCCAGCTTAAAGAAAAATCAATCACACTTTCCAGCAGCGTAGCTTTCCCATGCAAAAAAAGCCATTACTGGCATATCTAGCGGAGCAGGAATCTATTAAAATGCTCTAATCCTTAACCAAGTTACTCAGATTTATTTCTTCCACTCAGACTGTGATTTGTTCATGAAGTTTAATTTAAACATGCTAACTTGTTGAAATGCTGCCTTTTAGTTCCAGAAACCGCAGGACCAATATCCCCCATTCCGGTTTGGGACTGTGCCCAATGGCAGCACGGAACGAAACATAAGGAGCAATTATCCCGAAATGCATTCCCACATGGTTAAATACAACCAAAAAGGTGTGGAGGATGCTCTCAACAGCCTCAAAACTGGG[T/A]GCGTTTACTGTAAATTCTCACCTGAAACTCTAAAACAAATCCTTCCCTGATGTATTAGCATTTATACATTCTGTTGTTGTTTTTGTATTGTTAACAGCAAGCTGGATGCCTTCATATATGATGCAGCCGTGCTTAACTACATGGCCGGTAAAGATGAAGGGTGTAAATTGGTGACCATTGGTAGCGGGAAGGTGTTTGCTACGACAGGCTACGGTATCGCCCTTCAGAAAGAATCTCGATGGAAGCGGCCGATTGACCTCGCTCTTCTCCAGTTCCTTGCTGACGGTAACTTCAGAAACTTACTTTTGCTAGAGGAGCTCTGCTTCACAAATCTGACCCAAATATATTATTTATCACAGGTGACACTCAGAAGCTGCAGACGGTGTGGCTCACTGGGATCTGTCGTAATGAGAAGAAGGAGGTGATGAGCTCTAAGCTGGACATTGACAACATGGCTGGAGTGTTTTACATGCTTCTGGTGGCTATGGGTCTCAGTCTGC
Associated Phenotype:
Not determined