ZMP
bbs4
Ensembl ID:
ZFIN ID:
Description:
Bardet-Biedl syndrome 4 [Source:RefSeq peptide;Acc:NP_001070934]
Human Orthologue:
BBS4
Human Description:
Bardet-Biedl syndrome 4 [Source:HGNC Symbol;Acc:969]
Mouse Orthologue:
Bbs4
Mouse Description:
Bardet-Biedl syndrome 4 (human) Gene [Source:MGI Symbol;Acc:MGI:2143311]
Alleles
There are 2 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa258 | Nonsense | F2 line generated | Not yet available |
sa11279 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa258
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092919 | Nonsense | 160 | 359 | 8 | 16 |
ENSDART00000122929 | Nonsense | 160 | 528 | 8 | 16 |
The following transcripts of ENSDARG00000063522 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 25 (position 2624919)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 25 | 2532310 |
GRCz11 | 25 | 2685700 |
KASP Assay ID:
554-2691.1 (used for ordering genotyping assays)
KASP Sequence:
AGCTGGGTTTCTGTTCTCTCCGTGTCTGCAGGCAGAAGAGCAGTTAAACT[T/A]GGCATTACAGCTGAATAAACACGATCTGACCTACATGATGCTGGGAAAAA
Long Flanking Sequence:
GACTAAGCAGTCAGATCTTACTGTCCTAATTAAATCATTAATAATCAAGGCATGATCATATTTTATTGTGGTCAAATAAGCGTCATCTAGAGGCCTTTGCCTTTCATATAAGCCACTTCTGACACAAAACGATCAACTAGAAGTCAAATTATTATTTGTGGTTTCTTAAACTTGAATAGGCGACAAGACTTTTGTCAGGTAGTGTATATTTTGCCAATAAACAAATAAGATGTATGTAAAGCACTGAATAAATATGTGGTTATTTTTACCCACAGGAGATCAGCCATAATCTGGGCGTTTGCTACATCTACACCAAAGACTTCAGGAGTGTAGGTTCATCCAGCCTAAAAACTATGATTCTGTCTGTTCAGTCATGTCTTTGTGAATATTGGCCATGATATTGGGTTACATACTTTATTGAACCGTCTTATCTTGTTTTCACACGTCTTCAGCTGGGTTTCTGTTCTCTCCGTGTCTGCAGGCAGAAGAGCAGTTAAACT[T/A]GGCATTACAGCTGAATAAACACGATCTGACCTACATGATGCTGGGAAAAATACACTTACTGCAGGGGGACACAGAGAAAGCCATCGACGTCTACAAGAGCGCTGTGGAGTAGGTCTCAATACACATTGTTACAACCTCTTTGACTCTTGGATGTTAGTCTTGGGTAAAAGTAATAACGTTTTAAAGGTGTGGTACTTTTACAAGTGATGGACGAAAGTAAAAGACACAAACAACAAAACTGCCAACCAAAGTGATTTAATGTACAAAAAAGTGAAATCAGAGTAATGCCCAAATATTAGGGATGTAACGGTATTGTAAATACCGTCATACCGCAATATTATTTTTTTTCGATATTACCGTAGTCGCATGACTCTGTAAAACTATAGGTCTATAGGTTGAGCGCGCATACTCAAGAGCGGTGTTGTCGCTCGCCTACTGAAGGGCGGGACGGAGGGTGTGACACAGCACACTGTTCAGATTGATGCAGACATGAGACCTCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11279
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000092919 | Nonsense | 298 | 359 | 12 | 16 |
ENSDART00000122929 | Nonsense | 298 | 528 | 12 | 16 |
The following transcripts of ENSDARG00000063522 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 25 (position 2636410)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 25 | 2543801 |
GRCz11 | 25 | 2697191 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTATCTTTTGATATTTMAGGCCATCAGCTGTCTGAAGAGAGCGAATTA[T/G]CTGTCTCCKTTTGACTGGAAGATTYTGTATAATCTGGGTTTGGTTCACCT
Long Flanking Sequence:
AAAGCTTTCGAGCATCTGGGAAACGCTCTGACCTATGACCCCAATAACTTTAAGGTGAGGCGCAGTTTCAGTTGTATGCTGTATGTGTGTGTTGCCTTTGGTTTGCCTTATGAACTGTGAAGAAAGACCTGTTTTGATATTTGTGTTCTCTATTGAAGCTGTTTTTGCATTGCATAAAGTGCTATAAAATTGAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCAGGCCATCCTTGCGGCTGGCAGTATGATGCAGACTCATGGAGATTATGACGTGGCCATGAACAAGTATCGTGTGGCGGCATACGCTGTCCCCGAGAGCCCACCTCTCTGGAATAACATCGGCATGTGCTTCTTCGGCAAAAAGAAATACGTCGCTGTGAGTTACACACCATAACTACAACAACTAATGCTTAAATGTAGCTTTATTGTACGTATATATATTTATCTTTTGATATTTCAGGCCATCAGCTGTCTGAAGAGAGCGAATTA[T/G]CTGTCTCCGTTTGACTGGAAGATTCTGTATAATCTGGGTTTGGTTCACCTCACCATGCAGCAGTTCGCTTCCGCTTTCCACTTTCTGAGCGCCGCCATCAACCTGCGGCCACGCATGAGTGAACTATACATGCTGCTTGCCGGTAAATATATATCACATATGATCATATATATATATGTATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATATGTGTGTGTGTATATATATATATATATATATATATATATATGTATGTATATATACACACACACATACACATATATATATAGACAAAAGTGAGGTATATATGCTCCTCGCAGATAAATGTATATCGCGTAATGATCATATATAGACATAAGTGAACTATACCTGCTGTTTGCGGGAAAATATACATCACGTTCTGATCATATATATACATAAGTGAACTATACATCCTTCTTGCGGGTAAATATACATCATATACTGAT
Associated Phenotype:
Not determined