ZMP

lin54

Ensembl ID:

ENSDARG00000063194

ZFIN ID:

ZDB-GENE-060929-440

Description:

Protein lin-54 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q08CM4]

Human Orthologue:

LIN54

Human Description:

lin-54 homolog (C. elegans) [Source:HGNC Symbol;Acc:25397]

Mouse Orthologue:

Lin54

Mouse Description:

lin-54 homolog (C. elegans) Gene [Source:MGI Symbol;Acc:MGI:2140902]

Alleles

There is 1 allele of this gene:

Allele Name	Consequence	Status	Availability
sa18399	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa18399

Status:

Available for shipment
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Availability:

Order Allele From ZIRC
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Mutation:

C > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000092110	Nonsense	86	771	2	14
ENSDART00000135527	Nonsense	86	211	2	2

The following transcripts of ENSDARG00000063194 do not overlap with this mutation:

ENSDART00000134303

Genomic Location (Zv9):

Chromosome 10 (position 11313773)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	10	11389639
GRCz11	10	11347877

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TGCTAAAAGTACCACMAGYTCMACAACTCAACTCCTACTCACCCCATCAT[C/A]ATCCTCCTCCACCACTACAAAAAACGCCACTCCGACCCTCCCCAAAATTC

Long Flanking Sequence:

TTCAATCGCGGTTAATAGGGAAATCGCTTAATTGTTGAATCCTTACTTGGAAACAATATAACAGAAACATTCTGCGTTTTTAAAACCTTGACCTTTTCAAACAGACCTCTCAGCAAACCTTGAGACCGGTTATCTGTCTGTCTAGTGCACATGATACTTTTTCATACTTGATCACTGATATATTCTAACTTTGTTTCATATGTATCTATATTTTTCTCCAGTGTGTTTTCGGTAACTCTGCAGAATGGATGTGGTGTCTCCTGAGCTCAACAGCCTCCTCCCTGATGAGATCATGGATACAGAGGCAATGGATGAAGATCCGCCTGCTTCACATCTTACCCCTCCGCCCCAATCTGCCCCAGAGTCGGCGCAGGTACCAATGGAAACAGAGGTGCCTGAAATCATTAGCATTTGTCCAACCACCGCGTCTATGCAGGCCATCTCCACCAATGCTAAAAGTACCACCAGTTCCACAACTCAACTCCTACTCACCCCATCAT[C/A]ATCCTCCTCCACCACTACAAAAAACGCCACTCCGACCCTCCCCAAAATTCCCAGCCTTTCCGTCCCGCCAAACCACCAGCTCATCATCAATAAAGTGGCGGCAGATGGAAAGTCTCCGGGCGGCGCAGTGATAAAGCAGGAGGGCCAGAAACTGCTGGTTGCCGGGCTCAGTAAAACAGGGCAGCCCATTATGCTGGCTCTGCCCCACGCTTGGAACAAGCCGGCCACCAGCCAGGGCTCAGGTGATGCCAAGAGCCAGCCCACGCAGATCAAGATGGTGACGGCGATGGGTAAGCCTGTGATCGCAGTGAGCTCAGCCAGTCAGCTGGTGGCTTCATCCACACCACTGCAGGCACAGCACCTCAAGACACTGCAGGTGGGTAATCTCCGCCCAGACTTACACTGTAATATTGCTAATTAGAGCTACACAATATAGCCACAGAGTTTATGATTTTTTAATATTTTTAATATATTAGAGAATTTAAAGTATTCAGGCACAA

Associated Phenotype:

Not determined