ZMP
obsl1a
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC796577 [Source:RefSeq peptide;Acc:NP_001121829]
Human Orthologue:
OBSL1
Human Description:
obscurin-like 1 [Source:HGNC Symbol;Acc:29092]
Mouse Orthologue:
Obsl1
Mouse Description:
obscurin-like 1 Gene [Source:MGI Symbol;Acc:MGI:2138628]
Alleles
There are 9 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa14871 | Nonsense | Available for shipment | Available now |
sa20691 | Nonsense | Available for shipment | Available now |
sa25336 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa33864 | Nonsense | Available for shipment | Available now |
sa11178 | Nonsense | Available for shipment | Available now |
sa33863 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
sa33862 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa9215 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa25335 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa14871
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 133 | 1879 | 2 | 22 |
ENSDART00000126782 | None | None | 886 | None | 12 |
ENSDART00000137136 | Nonsense | 155 | 2006 | 1 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22873165)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19128611 |
GRCz11 | 6 | 21188833 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGGAAAAGAAAAAAGACCCATTCCAAGATARCAAGCCTTATTTTTTGATC[A/T]AACCACTTTCCCTGAGAGTAGATCGTGGAGAAGATGCTGCCTTCTCCTGC
Long Flanking Sequence:
TCTGATAAAACACAAAACAAGTGACAATAAAAATAAAAATGGATGTTTTTGGTGGTGCTCCACGTGTGCTTGGTTACCCACGGCCAGTTCTGGTGAAATGTGGAACAGACGCTGTGCTTAAATGTCAGATTGGTGGAGATCCCCAACCAGATGTGATATGGGAGCGGAAAAATGAGTCTATTCATCCTGAGGGTCGTTATCGTATTACCCAAGATGGCAAAGTGTACACACTTAACATCTCTGGGGTCACCATGGAAGATGCTGGACAGTATATTTGCAGAGCCAAGAACAATATTGGGGAAACATATGCAGCTGCTACCCTTAAAGTGCAAGAGGAGACTCAAGAGCAGCAAACACAGCCAGCCCAAGCACCCCCACCCCAACAAAATGACGTACAAGTAATTCCACCAGAACAAGATATGAAAATGAAGATACAACAACAGGTTGGGGTGGAAAAGAAAAAAGACCCATTCCAAGATAGCAAGCCTTATTTTTTGATC[A/T]AACCACTTTCCCTGAGAGTAGATCGTGGAGAAGATGCTGCCTTCTCCTGCAAGATCACAGGCGATCCTTTGCCTCAAGTGGTTTGGGAGAAAGATGGTAAGCAGTTAAATGAGATCTATGAGAGTGCCCACTATCATGTGGGCCAGCAAGATGGTGGCTGGTTCCAGTTAAAAATTTTCAAAACAAGAACTCCAGATGGAGGGGTTTATATGTGCAAAGCAGTCAACAAGCATGGAGAAGCAATAACCGGAGCTGTGCTCCTGGTAGAGCCCATTCCAGAACACAGAGAGGGGAGCATGACGAATGGATACACCAATGGTCATTATTCACCACAACATTCAAGGGCCAAACACTCAAAAGAACCTCACCTGAATGTGTCAAAGGCAAAGAAATTCACAGTCACTGAGGGCAAACATGCCAAATTCCGTTGTTATGTCACAGGAAAGCCTAAGCCAGAGATCGTATGGAAGAGAAATGGAGAAATCATTATGCCAAGTCGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa20691
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 693 | 1879 | 7 | 22 |
ENSDART00000126782 | None | None | 886 | None | 12 |
ENSDART00000137136 | Nonsense | 730 | 2006 | 5 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22858625)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19114071 |
GRCz11 | 6 | 21174293 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGCCAAATGTGTATGATGGAGCTGAAATCACTTTTATTGCCACTGGTGTA[C/T]GAGATTCAGCATCCCTACAGATTAAAGGTCAGCATTCGTGTGGATGATTC
Long Flanking Sequence:
ATGTTTGTTGTAGGTGTTCTTTAAAAAAAAAAAAAAACGTTTAAAATATACACTATAAAAACACATTTATTAGAGTTATTTTTTTCAGAGTAAAGTTTTGTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGGCTGTAGTAGGTATGTTTGTGTGTTTAAAGATAATTTGTAGTATTATTTGCAGCCCCAGGTCCAAAGATCAAAAGCCCTCTGAAGAATGCTGTGGTGACTGAAGGGGAGGATGCTGTGTTCTCCATTGAACTCTCTTCAGAATTGATTGGCACATGGTTCCTGAATAGCCAGCAGCTGCAGCAAAGTGAACACTTCTCTATGACTCAGTCAAAGAACCAACACATCCTTCGCATCCGCCAAGTGCCAAATGTGTATGATGGAGCTGAAATCACTTTTATTGCCACTGGTGTA[C/T]GAGATTCAGCATCCCTACAGATTAAAGGTCAGCATTCGTGTGGATGATTCAGCTTTTTTATTTTATTTTATTTTTATTTTTTTCACTATGAAAGACATCAGCTTAATATTATGTTTATGGGAGGGGAAATAGGCTGGTTTTAGCTTGTGGCTTATATAATTGTACAATGGCTGGAGTAATCTTGCACACATAATTACAAGGAAATCTGTCATTGAAGGATCAAGTTTTGAGATTGTCTAAATAAAATAACAGATTTGGACAGGACAGATTTGTTTTTTTAAAAAAAGGCTTGTATGAATGGTAAACGATAAGATAAGGTAAGATTAGGTAAAAAGATTTTTATTCTGTTTTTACATCTATTAAAGTCAAACTGTTGTACTTGACAATACTTAATTACACTCTTTTCAACACAAATGACTTGTTTCTATCTAACAGAAATGTTATTCTGTTGAATTTTGTAGTATGTGAGGTGAAATTTTTACCATTGTCAGAGATGGACA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25336
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 831 | 1879 | 9 | 22 |
ENSDART00000126782 | None | None | 886 | None | 12 |
ENSDART00000137136 | Nonsense | 960 | 2006 | 8 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22856764)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19112210 |
GRCz11 | 6 | 21172432 |
KASP Assay ID:
554-7533.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGATAGTCCTAAACTGTGAGCTCTCTCGATCTAATGGAGAGGTTCAGTG[G/A]TTTAAAGATGGCCTAAAGCTCCAAGAGACTGACAATATTCGCCTCAGTGC
Long Flanking Sequence:
AAATTAATGTTTACATCATTCACCTTTGTTCAAGCTTATTGCCTGACATAATTGCTTTACAAACATCTTGAAGTGCCAGAGGTTTTGTTAAACAAACTTTCAATGTATGAATATAAATCTTTCAAATTTGTTTTAAAATTTCAGCATTTATGTTCTAAACAAAAGTCAAGTTATATATGTAAAAAAAATTAAGTTAATGAAGAATTTTTGTGGAGGAGTTTTTGTGAGGTGAACTCTGTTTTGTAATAGAATCATATTACATAGATTTAAATACAGATTGTTTTTAATCATGACCCTTAAGTTGAGTCTTAAGATATTGAAATTAAACAAAACCGATCTAATACTTGTTGATTTTTGGCTGACTGATTGTTGACTGACTTTCATCTAGAACCTCCAATTACAATTGTGGACCCAAAAGATGACATACATATGGAGCGCTATGTCTCTGAGGAGATAGTCCTAAACTGTGAGCTCTCTCGATCTAATGGAGAGGTTCAGTG[G/A]TTTAAAGATGGCCTAAAGCTCCAAGAGACTGACAATATTCGCCTCAGTGCTGAAGGGCCATACAGGAGGGTGATCATTTTCTGTGCTTCCAAGCGGGACTCTGGAGAGTATGTATGTGACGCAGGAGGTGACTCGGTTTTCTTTCAGCTCCTTATTACAGGTATGTAACAAAAAAAAGTTTCATGCATTTTTCTATTGTCATTTTTTCCATCTGTTTTATTCATTCTTTGTTTCTAAAACAAATGAAGTGATTCAATCATGAACATTTGTTAATAATTAAGCCAATTATTGAATAATAAAACAGTAATTCTGAAATACTAAATAATAAATACCGTGTTCAAATTGGTTTCTTCTGTGTGCTCCGGTTTCCCACACAGTCCAAAGACATGTGCTATAGGTGAATTGTGCTAAATTGGCCCTAGTGTATATCTGTGAATGTGAGAGTGTATGGGTGTTTCCCAGTACTGGGTTGCAGCTGGAAAAGCATCCGCTGCTTAAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33864
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 1079 | 1879 | 12 | 22 |
ENSDART00000126782 | None | None | 886 | None | 12 |
ENSDART00000137136 | Nonsense | 1208 | 2006 | 11 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22854105)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19109551 |
GRCz11 | 6 | 21169773 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TACTTTTTTTCTCTCTTACAGAGGCACCAGTAACAATCCTGAATAAAGAT[C/T]AAATCAAGAATGAGCACAAAGTTATGTTATATGATGATGTTGTAATGGAG
Long Flanking Sequence:
AAAGAAACAAGAAAATATTTAATTTATTATACTATATAGTAAGTGCTGCAGATTTCAGCATATTTATTACTCTTTGTTGATGACACCTTTTTTTTTCCTCACAGAGCCTCCTGTGAAACTTTCCTCCTCCAAGCAGTCAGGCAGCATTACTGAGAGTTTTGCAGGTGACCCTGTTATTCTAGAGCTTGAGGTTTCCCGTGAAAATGCAGAGGTATGCTGGATGAAAGATGGCATGAAAGTAGAAGAGAGCAGTAACATTACAATTACAGAGAACGGCCTTACACGCAAGATAACCATCCATTGCCCAACTCTAAAGGATTCTGGCATATACACCTGCAATGCCATTGATGACACAATGGATTTTAAAGTCAAAATTACTGGTACTGTATGGTTTTAAAAAGATAGTTAAATCATAATTACAAATGGTATTTATAAAAGTGAATACACTTTTACTTTTTTTCTCTCTTACAGAGGCACCAGTAACAATCCTGAATAAAGAT[C/T]AAATCAAGAATGAGCACAAAGTTATGTTATATGATGATGTTGTAATGGAGTGTGAGCTGTCTTCAGCCAATGGTGTGGTAACTTGGTATAAAAATGGCAGTCCAATTGAAGAGAACGAGCGCTTCTGTTTGGAGGAGGAAGGCACATTTCGATCCCTGGTCATTCTCTGTGCGGAGCTGCAAGACTCTGGAGAATATACGCTTGATGCTAAAAATGATACATTTTCATTTCATGTCACAGTACAAGGTAAACAAAAAATTTGTCTTTAAACCGAAGCTGCTCAAAAAGCAAACAAAAGCCATAATGACAGACTTTTGATGAACTGTCTGTCTTCCAGAGCCATCAGTGAAGATCATTGGCAATTCTGGTGATCCTGACTACCAGGAGATGGTGACAGGAGATGATCTCATCTTAGCCTGTGAGGTTTCCCGAGCCAATGCACCAGTGAAGTGGCTATTTAATGAAAAAGTGTTGATCCCCGATGAGCGCACACATATTGA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa11178
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 1149 | 1879 | 12 | 22 |
ENSDART00000126782 | None | None | 886 | None | 12 |
ENSDART00000137136 | Nonsense | 1278 | 2006 | 11 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22853895)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19109341 |
GRCz11 | 6 | 21169563 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TCATTCTCTGTGMGGAGCTGCARGACTCWGGAGAATATACGCTTGATGCT[A/T]AAAATGATACATTTTCAKTTCATGTCACAGTACAAGGTAAACAAAAAATK
Long Flanking Sequence:
GGTATGCTGGATGAAAGATGGCATGAAAGTAGAAGAGAGCAGTAACATTACAATTACAGAGAACGGCCTTACACGCAAGATAACCATCCATTGCCCAACTCTAAAGGATTCTGGCATATACACCTGCAATGCCATTGATGACACAATGGATTTTAAAGTCAAAATTACTGGTACTGTATGGTTTTAAAAAGATAGTTAAATCATAATTACAAATGGTATTTATAAAAGTGAATACACTTTTACTTTTTTTCTCTCTTACAGAGGCACCAGTAACAATCCTGAATAAAGATCAAATCAAGAATGAGCACAAAGTTATGTTATATGATGATGTTGTAATGGAGTGTGAGCTGTCTTCAGCCAATGGTGTGGTAACTTGGTATAAAAATGGCAGTCCAATTGAAGAGAACGAGCGCTTCTGTTTGGAGGAGGAAGGCACATTTCGATCCCTGGTCATTCTCTGTGCGGAGCTGCAAGACTCTGGAGAATATACGCTTGATGCT[A/T]AAAATGATACATTTTCATTTCATGTCACAGTACAAGGTAAACAAAAAATTTGTCTTTAAACCGAAGCTGCTCAAAAAGCAAACAAAAGCCATAATGACAGACTTTTGATGAACTGTCTGTCTTCCAGAGCCATCAGTGAAGATCATTGGCAATTCTGGTGATCCTGACTACCAGGAGATGGTGACAGGAGATGATCTCATCTTAGCCTGTGAGGTTTCCCGAGCCAATGCACCAGTGAAGTGGCTATTTAATGAAAAAGTGTTGATCCCCGATGAGCGCACACATATTGAAAGCCAAGGAACACTCCGGAAACTTACTATATCTAACATCCTCGTTTCTGACTCTGGAAAATACATGTGTGATGCTGTAGATGACAAGATGCTAACTGTTGTTAAAGTTCAAGGTATTCTATTTTCTTTGCTTTATACAATTTCAAACTGCTAATTAAAACTATTTAATGTGATTTGAATACAATGCTATTTGGCTTGACGACTTGACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33863
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Essential Splice Site | 1253 | 1879 | 13 | 22 |
ENSDART00000126782 | Essential Splice Site | 263 | 886 | 3 | 12 |
ENSDART00000137136 | Essential Splice Site | 1382 | 2006 | 12 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22853490)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19108936 |
GRCz11 | 6 | 21169158 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATGTGTGATGCTGTAGATGACAAGATGCTAACTGTTGTTAAAGTTCAAGG[T/C]ATTCTATTTTCTTTGCTTTATACAATTTCAAACTGCTAATTAAAACTATT
Long Flanking Sequence:
ACGAGCGCTTCTGTTTGGAGGAGGAAGGCACATTTCGATCCCTGGTCATTCTCTGTGCGGAGCTGCAAGACTCTGGAGAATATACGCTTGATGCTAAAAATGATACATTTTCATTTCATGTCACAGTACAAGGTAAACAAAAAATTTGTCTTTAAACCGAAGCTGCTCAAAAAGCAAACAAAAGCCATAATGACAGACTTTTGATGAACTGTCTGTCTTCCAGAGCCATCAGTGAAGATCATTGGCAATTCTGGTGATCCTGACTACCAGGAGATGGTGACAGGAGATGATCTCATCTTAGCCTGTGAGGTTTCCCGAGCCAATGCACCAGTGAAGTGGCTATTTAATGAAAAAGTGTTGATCCCCGATGAGCGCACACATATTGAAAGCCAAGGAACACTCCGGAAACTTACTATATCTAACATCCTCGTTTCTGACTCTGGAAAATACATGTGTGATGCTGTAGATGACAAGATGCTAACTGTTGTTAAAGTTCAAGG[T/C]ATTCTATTTTCTTTGCTTTATACAATTTCAAACTGCTAATTAAAACTATTTAATGTGATTTGAATACAATGCTATTTGGCTTGACGACTTGACACTCACTTCAATTAAATAAACTATGACTGAAAACCATGAAAAAAATATGTTTGTTATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATGACTCTTCTATATTTTTCAAATAATTTTTAATATTAGTTTAAATCATATATGTATATGTATATATATATATATATATTTATTTATTTATTTATTTTTTCCATTTAAGTGTCAGATAGTAGACAACTTTGAAATGGAAACCATTCAAAATCATTAATCAATGTTGTCCTAAAACCATTAAACAACCCCCATTCTTGTCTTAGGGTAATTTTGATTTGTTTTAAATTGACTACTGTAGAAAGTAAAAAGAAAAAGATAAAAGATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33862
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 1290 | 1879 | 14 | 22 |
ENSDART00000126782 | None | None | 886 | None | 12 |
ENSDART00000137136 | None | None | 2006 | None | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22852772)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19108218 |
GRCz11 | 6 | 21168440 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCTGTCACCTTGACTGCCATGGTTTCCAGACCCAATGCTCAAGTGAGGTG[G/A]CTTAAAGACTGGACTCAAATCAGCGGAGAACGATTCCACACAGCTAGCCT
Long Flanking Sequence:
TATATATATATATATATAATGACTCTTCTATATTTTTCAAATAATTTTTAATATTAGTTTAAATCATATATGTATATGTATATATATATATATATATTTATTTATTTATTTATTTTTTCCATTTAAGTGTCAGATAGTAGACAACTTTGAAATGGAAACCATTCAAAATCATTAATCAATGTTGTCCTAAAACCATTAAACAACCCCCATTCTTGTCTTAGGGTAATTTTGATTTGTTTTAAATTGACTACTGTAGAAAGTAAAAAGAAAAAGATAAAAGATGGAAGCCTAATATAGATTTTTTTTTTCATCATGTACATTCCTCTTGTCATAGGCCCATTTATAAAAAAGATAATAAAACTATGTGCCATTTGTGATGCATTTCCAGAGCCACCTGTTGAGTTCCTCAACAAAGAAGAGGTGAACTTGGTCACTGGCTACGAAGCAGAGCCTGTCACCTTGACTGCCATGGTTTCCAGACCCAATGCTCAAGTGAGGTG[G/A]CTTAAAGACTGGACTCAAATCAGCGGAGAACGATTCCACACAGCTAGCCTGGGTCTGACCCGCACTTTCACCATCGACCCATTAAAGAAGCTAGACAGTGGAGAGTACACATGTGATGCAAACTCAGATGAGATGCACTTCAGTCTCCTAGTTAAAGGTCGGTAACTGGATACTAACGCTGTTATAGTTTTGCATTTTTAAATTAGTTTCAATTTCAATGCTATTTTTACATTTACTGTTCATTTCAGTTTAGTTTTAGTTCATTTTATTAATGGTAGGATTAGTTTAGTTTTATTTTGAGAACTTACATTAACTGAGCTTACATTTACTCTTGTGCAATCCTCTTGGTAATAAATATAATAATTTTTTGAGCAAACACTAAATTAAAAAAAAATACAAATGCAATGAATAAATCTTTACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa9215
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Nonsense | 1633 | 1879 | 18 | 22 |
ENSDART00000126782 | Nonsense | 553 | 886 | 7 | 12 |
ENSDART00000137136 | Nonsense | 1672 | 2006 | 16 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22846996)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19102442 |
GRCz11 | 6 | 21162664 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CTTTAAGAAGTTGWCTGATGTCAGAATTGAGGAGGAATCTTCAGTCGTTT[T/A]GGAGTGCGAGTTGTCTAGRCCAAATGTGGATGTCAGATGGCAAAAGGTAC
Long Flanking Sequence:
AAACACGATCTGACTGTAAGAAACTTAAAAAGATACTTTACCCATCATTTTTGGTGAACTATCCCAATAAATCCATACTTCAAAGTATTCAAGAATTTAAGTTAAAATGTCATATTGTGTTTTTTAAAATAGCACAATGGACTTAAACATGAAAATGTACATACAGCATAAATAAACGTAATTTACCGTGGTTGTTAGGTGCTTGAAAAGTATAAAAATGCACCTTGAAAGTGCTTGAAAAATGCAGGAATTTGAAGTTGGAAAAAGTGTAAGAACCCTGTCAAGCTCATATGCATTTTTAACATCTATTTTTGTTGTTTTGACATCAAGATGACCGCTGGACAATGATGCACCTGATTCAGATTAAGTTTATATGGTATTCATATTTGTCACATAATTGAAAAGGCAACAAGTATTGTTCTTTTATTTTTTAGAAACACCAGTAGCAATCTTTAAGAAGTTGTCTGATGTCAGAATTGAGGAGGAATCTTCAGTCGTTT[T/A]GGAGTGCGAGTTGTCTAGACCAAATGTGGATGTCAGATGGCAAAAGGTACTTCTGCATAATAAAACAAACAAATGTATATTTCATAAAGATATTATTTCAGTCTTCTGAACTAAGATGTTGTCTCTTTGGAATGATTGACAGAATGGGATAGAGCTCAAATCCAGTAAGACTTTAAGGATTTATTCCATGGGACGCAAGCGCTGTTTGCAGATCTTGGAATGCAGCATCAGTGACTCAGGTCTTTATACTTGTGAAATAGGTGACCTCAGCACTTCCTGCAAACTTGAGGTCTACGGTAAGCCTATAAAACTTTAGTATTTAACAGTTTACTGTGCTTATTGGAAACAAAAAATTTGCATATTACAGTATGTATTACAAAGGATTTTAGTAGAGAATTAAAGAATTGAAAAATAGAGAATTTCCCTCTTACTTTATTTCCTGCCCTGAACTCAATAATGAAAAAGCTCACTGCACCCTGTTTACTTCACATAAATCTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25335
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000102838 | Essential Splice Site | 1700 | 1879 | 20 | 22 |
ENSDART00000126782 | Essential Splice Site | 620 | 886 | 9 | 12 |
ENSDART00000137136 | Essential Splice Site | 1739 | 2006 | 18 | 21 |
Genomic Location (Zv9):
Chromosome 6 (position 22846112)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 6 | 19101558 |
GRCz11 | 6 | 21161780 |
KASP Assay ID:
554-7287.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CACATTCCAATTTTAAGAACCCACATTTGTACTTTCTCTAAATTATTTTC[A/T]GAACATGAATTAGAACTCATAACTGGCTTGGAGGATCTTTGGATTAAGGA
Long Flanking Sequence:
TTTTAGTAGAGAATTAAAGAATTGAAAAATAGAGAATTTCCCTCTTACTTTATTTCCTGCCCTGAACTCAATAATGAAAAAGCTCACTGCACCCTGTTTACTTCACATAAATCTAAAGAAAATTATGTTACCAATGGTTAATTACCATGGAAAGTTATCTTAGATTACTTAAAGTTTACTCTTAAACTGATGCCACTTATTTTATTGTTAATGCCAAATGTGATGATTAATCAGTGTCAATATTTTGTTTTTATAAATATTTTTGACTTTGTATCTCTAATCAAAAATTAGAATTAGACATTTATAATATAATTCACTTACGCCAGTCATATTTCTGCTTTTACCCTGTTGCTCATTTTTCAAAAAGAAACTCTTATTAAATTAATAATAAATAAAAAAAACTCACTCTTAAAAACATCTTAATATGATCCTAAAAGTCTATTACAACTTCACATTCCAATTTTAAGAACCCACATTTGTACTTTCTCTAAATTATTTTC[A/T]GAACATGAATTAGAACTCATAACTGGCTTGGAGGATCTTTGGATTAAGGAAGACCAGAATGCTGTCTTTATGTGTGAACTTTCCATGGAAGATATGCCTGGTGAATGGTACAAAAATGGCAGCAGGATACGCCCCACTTCCACTATCAAAACTCGTACTGAGGGTGAGGATAAACTGGAAAAAAGGATAAGAAATCTGTACATAGAAAGTTGGTATATTAGCAAAAACAATACCAGGCTTTTCAATCCTTAAAAAAATATTTTTGATTTACTATTTTAACAGGCACAAAGCACTTCCTGCTTATATGCAATGTAAAAGCAGAAGATTCTGGAGAAATCAAGTTTGTTTCCAAACAAGTGGAGTCAGTTGCCTGCCTTGAGGTTGAAGGTACTGCATAAAATAATTAACTTAATAACTGAATAATTGTGTATGACTACTTGAGGAAACCAACAAATCCTTTCTATATCTCTTTTTGCAGAGCTTCCTGTAAGCATTGTCCG
Associated Phenotype:
Not determined