ZMP
si:dkey-202g15.6
Ensembl ID:
ZFIN IDs:
Human Orthologue:
CORO1C
Human Description:
coronin, actin binding protein, 1C [Source:HGNC Symbol;Acc:2254]
Mouse Orthologue:
Coro1c
Mouse Description:
coronin, actin binding protein 1C Gene [Source:MGI Symbol;Acc:MGI:1345964]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25301 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa31455 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa25301
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000039796 | Nonsense | 352 | 482 | 8 | 10 |
| ENSDART00000140640 | None | None | 66 | None | 2 |
| ENSDART00000141446 | Nonsense | 344 | 474 | 9 | 11 |
| ENSDART00000147814 | None | None | 197 | None | 7 |
Genomic Location (Zv9):
Chromosome 5 (position 33525706)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 31287938 |
| GRCz11 | 5 | 31888091 |
KASP Assay ID:
554-7896.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATCATGTCTGTTGTCTCTCACAGATTTTATAAACTCCATGAAAGAAAGTG[T/A]GAGCCAATCATCATGACCGTCCCTAGAAAGGTACTTTCCACAGAATATTC
Long Flanking Sequence:
GTGGCACACCTTTCGTGTACATCCTTATGGACCGCCTTTTGCAGCTAGTCCAACAACCAGTATTGAAAAAATGCAAGTAAGACTGATTTTGAAAAAAGGGTTTACTGAAGAAACGCCAAACAAAAATACAAAGCTACAATAGACTCCATATAGCTTGGTCAAAAAACTGCATCTATAACTGCAATCTGACCTCAACATACACATAAATGACATCATGACGTAAGCCAAAAATACCAAAGTAAAGGTTTTTAAATTGTATTAATTATTAAATTATGCATTTTAGATCATACAATCACTATGAATTCTTATTATATTTGAATTACATTTTTCACCATGTTTTAACCTTTTTAACTAAATTATCATCACCAATGAATTATGCATAACTGGCTCAACGTTGTTGTATTTTTCTGCCTTAGAAATGCTGTTATAATCTGTGTCTGTTACAATAACATCATGTCTGTTGTCTCTCACAGATTTTATAAACTCCATGAAAGAAAGTG[T/A]GAGCCAATCATCATGACCGTCCCTAGAAAGGTACTTTCCACAGAATATTCTCTATTATTTTTCCATCAGTCTGAATAATAATCCCTGAAAAGTTATTAAACATAATGTTCACTTGATGAAATTTTATTTATTTTGTGTTTACTTTTACTGGCAATGCTCTATCAAAAGTGTTTTGAAGAAAAGGAAGGGCACTTGGTTTCAATTATCATTAAAGCAACAAATGATTTCAGAGAAACAAACATGAATCTAAAATAGTGATTATGGTATTTCCTGTGTCTTGTGTTTCTGGCAGTCAGACCTCTTCCAGGATGACCTCTATCCGGACACAGCGGGTCCAGATCCGGTGCTGGAGGCAGAGGAGTGGTTCGAAGGCAAGAATGGTGAACCGATCCTGATCTCGCTCAAACACGGTTATGTCCCGGGCAAGAACCGTGACCTCAAAGTAGTCAAGAAAAATGTGCTGGATAACAAGGCAACCAAGAAGGTGGAGGAGCCAACAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa31455
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000039796 | Essential Splice Site | 362 | 482 | 8 | 10 |
| ENSDART00000140640 | None | None | 66 | None | 2 |
| ENSDART00000141446 | Essential Splice Site | 354 | 474 | 9 | 11 |
| ENSDART00000147814 | None | None | 197 | None | 7 |
Genomic Location (Zv9):
Chromosome 5 (position 33525674)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 5 | 31287906 |
| GRCz11 | 5 | 31888059 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACTCCATGAAAGAAAGTGTGAGCCAATCATCATGACCGTCCCTAGAAAGG[T/A]ACTTTCCACAGAATATTCTCTATTATTTTTCCATCAGTCTGAATAATAAT
Long Flanking Sequence:
CGCCTTTTGCAGCTAGTCCAACAACCAGTATTGAAAAAATGCAAGTAAGACTGATTTTGAAAAAAGGGTTTACTGAAGAAACGCCAAACAAAAATACAAAGCTACAATAGACTCCATATAGCTTGGTCAAAAAACTGCATCTATAACTGCAATCTGACCTCAACATACACATAAATGACATCATGACGTAAGCCAAAAATACCAAAGTAAAGGTTTTTAAATTGTATTAATTATTAAATTATGCATTTTAGATCATACAATCACTATGAATTCTTATTATATTTGAATTACATTTTTCACCATGTTTTAACCTTTTTAACTAAATTATCATCACCAATGAATTATGCATAACTGGCTCAACGTTGTTGTATTTTTCTGCCTTAGAAATGCTGTTATAATCTGTGTCTGTTACAATAACATCATGTCTGTTGTCTCTCACAGATTTTATAAACTCCATGAAAGAAAGTGTGAGCCAATCATCATGACCGTCCCTAGAAAGG[T/A]ACTTTCCACAGAATATTCTCTATTATTTTTCCATCAGTCTGAATAATAATCCCTGAAAAGTTATTAAACATAATGTTCACTTGATGAAATTTTATTTATTTTGTGTTTACTTTTACTGGCAATGCTCTATCAAAAGTGTTTTGAAGAAAAGGAAGGGCACTTGGTTTCAATTATCATTAAAGCAACAAATGATTTCAGAGAAACAAACATGAATCTAAAATAGTGATTATGGTATTTCCTGTGTCTTGTGTTTCTGGCAGTCAGACCTCTTCCAGGATGACCTCTATCCGGACACAGCGGGTCCAGATCCGGTGCTGGAGGCAGAGGAGTGGTTCGAAGGCAAGAATGGTGAACCGATCCTGATCTCGCTCAAACACGGTTATGTCCCGGGCAAGAACCGTGACCTCAAAGTAGTCAAGAAAAATGTGCTGGATAACAAGGCAACCAAGAAGGTGGAGGAGCCAACAACTCCTCAGAAACCTGCCTCTCCTCAGCTAACC
Associated Phenotype:
Not determined