ZMP

zgc:136398

Ensembl ID:

ENSDARG00000011246

ZFIN ID:

ZDB-GENE-060623-10

Description:

KRR1 small subunit processome component homolog [Source:RefSeq peptide;Acc:NP_001038790]

Human Orthologue:

KRR1

Human Description:

KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:HGNC Symbol;Acc:5176]

Mouse Orthologue:

Krr1

Mouse Description:

KRR1, small subunit (SSU) processome component, homolog (yeast) Gene [Source:MGI Symbol;Acc:MGI:1289

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa12957	Essential Splice Site	Available for shipment	Available now
sa25271	Nonsense	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa12957

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC
Order Allele From EZRC

Mutation:

G > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000125815	Essential Splice Site	104	398	3	10

Genomic Location (Zv9):

Chromosome 4 (position 2123695)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	2413402
GRCz11	4	2262715

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

AATGAATTAGATTTTTTGTCTCATTTCTCTNNCTCTTCTGCTGCTGTGTA[G/A]TTCATCAATGCCACACTGGACCTGATTGAGGGCAGTATGACGGTGAACAC

Long Flanking Sequence:

ATTATTATTTTTTGGTTTGAAACAGATGATGCTGATCTGCTGACAGTCCCAGATGACTGGAAAGAGCCGAAGTTCACCAAAGCGGACAATCCTAAAGGTCTGCTGGAGGAGAGCAGCTTCGCCACACTTTTCCCCAAATACAGAGAGGCCTATCTGAAAGAGTGCTGGCCGCTGGTGCAGAAGGCCCTCGCCGAGCTCGTAAGTGTCCACTAAATCATAGCTTATTGTTGCATTAGCTGTTAAAGTGCTCATGAAATTAAAATGAAGTTTTTTAGATCTTAGTATCATTATGGTTAGTTTTAAGGGTAAGTATAAGCTGGTGTGCTCCAAAACACTTAAATTTTTTTTTTCAATTGTCTATTTAATATCCATTTGCTGTATATCTTATAATTATATATTTATGTGAAGAATAAGAATTGTTTTCTTATCTTGAATTATAGGCTGATTGTAAATGAATTAGATTTTTTGTCTCATTTCTCTGTCTCTTCTGCTGCTGTGTA[G/A]TTCATCAATGCCACACTGGACCTGATTGAGGGCAGTATGACGGTGAACACCACCAAGAAAACATTTGATCCGTATTCAATCATCAGAGCGAGGGATCTCATCAAGTTACTGGCTAGAAGTGTGCCCTTTGAACAGGTAAGCAACACCACTCATTTATGGATTATATATAATTTATGTATAAAATAATTTAGCACAGTATGATTAAAAAAAAAGTAAATTGAGTGATGATGCATCGCACTGATCAGAAGGGAAAGTAAAAAATATGTAATGTTATAATATATATTTATATTTCAAAGAATTCTGTTTATTTTAATATTTTTTTCTCAAATTTTTTATTATTGTTCTTTTTTATTTATTCCTAATGTTTTAATTGATTGTTATTTATGTATGTTATTTATTTTTAATGTTTTAATTGATTGTTATTTATGTATGTTATTTATTTTTAATGTTTTAATTGATTGTGATCATTATTTATTTGTTTTATTTATTTTTTATGTTTT

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa25271

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000125815	Nonsense	330	398	9	10

Genomic Location (Zv9):

Chromosome 4 (position 2120893)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	4	2410600
GRCz11	4	2259913

KASP Assay ID:

554-7442.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AAACGCATGCTTTTTTTTTTTAGGTTAAGCAGGCTGAGGCTTTATCTAAA[C/T]GACAAGAGGAGCGAAAGAAAGCCTTCGTTCCTCCCAAAGAGAAAACAGCA

Long Flanking Sequence:

CATTTCACACATTCAGTCTCTACTCCGTAACACAAATTGAAAAGTAATTGGAATAATATTTATTCCAATTTTTTCTGCAAACAATAGTTAATGAAATTAATTCATATTATAAAAGCATTTAACATCTTTGTTAAATCTCTCATCAAATTTAAATTAATCTAATTGTTAGTAAATCTAAACATTCTAATTATAATTCATATAATGATATAAATAAATGTACATTTTTATAAATAAATATGCAATTATTTATATATATATATATATATATATATATATATATAATATTATTATTATTAAAAAATGAATGTGTGGTTCACAGATTGATAAGGAGTTGGCAACAGGCGAGTTCTTCCTTCGTGAGAGCGAGAAGAGACGCAAGAAGATGAGTGAGATTAAGGTATGATTAAGCTTTTATACAAATGCAGGGGCTGATAGGTAATCATCCCTCATAAACGCATGCTTTTTTTTTTTAGGTTAAGCAGGCTGAGGCTTTATCTAAA[C/T]GACAAGAGGAGCGAAAGAAAGCCTTCGTTCCTCCCAAAGAGAAAACAGCAGTGAAGAAGAGCAAACCAGGTACACAAAACGTCACCAATCATATATATATATATATATATATATATGTGTGTGTATATATATATATATATATATATATATATATATATGTGTATATATATATATATATATATATATATATATATGTGTGTATATATATATATATATATATATATGTGTATATATATATATATATATATATATATATATATATATATATATATGTATGTATATATGTATGTATATATATATATATATAAACATACATACTTACATACATATACATACATACATATATATATTACATATATAACTTACAGCGAAATATAAAATCATAAATCGCATTATTTAAAAATAAAGAACGGTGTCTTATTTTGTATAATAAAAGTCATCACAATATGATAATAATAATAATTAGAAAAGTATGTATAATTATTATTCAGATTTAATGA

Associated Phenotype:

Not determined