ZMP
usp36
Ensembl ID:
ZFIN ID:
Description:
Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/TrEMBL;Acc:Q6PFP7]
Human Orthologue:
USP36
Human Description:
ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:20062]
Mouse Orthologue:
Usp36
Mouse Description:
ubiquitin specific peptidase 36 Gene [Source:MGI Symbol;Acc:MGI:1919594]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa26165 | Essential Splice Site | Mutation detected in F1 DNA | Not yet available |
| sa25266 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa26165
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047503 | Essential Splice Site | None | 912 | None | 17 |
| ENSDART00000123883 | Essential Splice Site | None | 755 | None | 17 |
| ENSDART00000124540 | None | None | 1104 | None | 20 |
| ENSDART00000129598 | Essential Splice Site | None | 1104 | None | 21 |
Genomic Location (Zv9):
Chromosome 3 (position 58444564)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 57560152 |
| GRCz11 | 3 | 57630676 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGTCTTAACATCAAAACACACCCGTCGATTCGCGATCATTCACGGATGGG[T/A]ACGTATGGAATGCTATTTCCGTGTGTTCACCGTGAAAATAACGTGCGAAT
Long Flanking Sequence:
TAAATACAAACTATATATTTATGTTTTTTCCCAGAGATTGGTTGCGTCTGAAAGAGCATCCGCTGCGTAAAAACTTGCTAGATAAGTTGGCGGTTCATTCCGCTGTGGTGGTCCAGGATTATTAAAGGGATTAAGCCGACAAGAAAATGAATGAATGAATTTGTCTGTTTCTTTCGCCCCCTTGTGGGCTTTAGTGTCTCCACGGGTCCTTCGAGTCTCCATACTGCAAACTCCTCGAGTAAACAACGCAGAGACAGAAATCATCCGTGTTAAAAGTTACACGCCAATCGATTTATGATTGGACACTGTCGCCATGAATGAAGCTTGTCGTCACCGGCGTGCTCAACCCTGATTGGCCGCTCCGTCACGTCAATCACCCAGGCACACGCCCTTTCATAATGCAGCATGGGGCAGAGAACGTAACAAAATGAAGGCTTCGTAGCGGAATACAGTCTTAACATCAAAACACACCCGTCGATTCGCGATCATTCACGGATGGG[T/A]ACGTATGGAATGCTATTTCCGTGTGTTCACCGTGAAAATAACGTGCGAATCTGCGGTGTTTCTTCAGTAAATGCCTGTGTGAGGGTTAAGAGCACATTGCAGCAGTCTGAACGCCACGTTCGCTTTGTGAGGCGGTTCGGGTCAGGAAGTGGAGCTGATTTTACATGCTTTAAACGTAAACTCGATGGAGATTAATAATGCTATGTTTCACTAGGGTTGATTATTAAATAGCGAAGTGACTGTCGGTGAAAACGGCTCTGTTTACGCTGAAGCAGATGCTAAAGTATCTTGCTAGCTTGCGACTAGCTAACTCTATCTAGACACTGCGACGCTAAACATGCTCTTTAATCTGACATCATACTGTAGTGAAGATGTAAACAATGTGGCCTGGTGATAGAGTTGACATATTAATGATGTCCTTGATCATCATAGCTCTCTGAATATACTGAATCGATAACATCTGCATCACTGTAACGTTATGTCAAACGAAATCTGAAATG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25266
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000047503 | Nonsense | 118 | 912 | 3 | 17 |
| ENSDART00000123883 | Nonsense | 118 | 755 | 3 | 17 |
| ENSDART00000124540 | Nonsense | 118 | 1104 | 2 | 20 |
| ENSDART00000129598 | Nonsense | 118 | 1104 | 3 | 21 |
Genomic Location (Zv9):
Chromosome 3 (position 58428162)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 57543750 |
| GRCz11 | 3 | 57614274 |
KASP Assay ID:
554-7314.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGATGCTCTTTCCAGGGAACAAGCTGTCCATGAAGTGGGAACGGGTGTA[T/A]CGGGTTGGAGCCGGCCTCCACAACCTGGGCAACACCTGCTTCCTCAACTC
Long Flanking Sequence:
TTAGATTTATTGATATGATTTTGTAGGGTAGTGCATTTGTTTAAAATATATTAAACAAATTATAAGCACATATAAATACAAAAGAGTAAAGATAGAAACAAAATAAACACAGTGTTTCCTCTAGGAAACCTCTAGGATGCTTCTTGTCCATTCTAAGACCCACTTTATGTATCGTATATCAATCAGGCAATGAAAATGGTTGATTTTTAAAGATAACAGACCTAGAAGTGCTTGAACTTGATTCCTGATATTTGACATCCTTCTGCATATACCCTATTGCAGTTTAACACATTGCAATGTCGATGCTGAAATGATTGTGTAACCCTACTAGATACTTTTATGTAGTGCTTTGTCTAGTAAAACAGAAACTAAAACGCGTTGTTCTGGTGTTTCCCCACAGTCTCAGAGTCTCTGAGTGTCGGGCAGAGCGATGGCATCCCCGCTCCGCAGAAGATGCTCTTTCCAGGGAACAAGCTGTCCATGAAGTGGGAACGGGTGTA[T/A]CGGGTTGGAGCCGGCCTCCACAACCTGGGCAACACCTGCTTCCTCAACTCCACTGTGCAGTGTCTGACCTACACCCCGCCGCTGGCCAACTACCTGCTGTCCAAGGAGCACAGCCGATCCTGTGAGAACAAGCCGCATTTCATAATAGAGCAATTCCAACATTATGGATGTGACATTTGCAGTGAAAACTTAAAGTATAAATTCACATAGGAAGTGTATGTTAACATATGTATACAACGCATCTGGAAAGCATTCATAGCGCTTCAGTTTTTCCACATTTTTTTATGTTACAGCCTTATTCACGCTGATGTTATAGGATGTCTGCATTGGTTTCTTTGGTAATGACAATGCGGACATGGGAAACTCAACAGCGACACAGTTGTTAATGCAGATGTTTTTATATAATGTGACATGCTGTCATTTCTCTTGAATGGTACATCTTACATGGCAGAAATGTAGGAAGATTAAATATACGCTGCCATCTTTGATAAATTGTAAAA
Associated Phenotype:
Not determined