Busch Lab

ZMP

thraa

Ensembl ID:
ENSDARG00000000151
ZFIN ID:
ZDB-GENE-990415-263
Description:
Thyroid hormone receptor alpha-A [Source:UniProtKB/Swiss-Prot;Acc:Q98867]
Human Orthologue:
THRA
Human Description:
thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian) [S
Mouse Orthologue:
Thra
Mouse Description:
thyroid hormone receptor alpha Gene [Source:MGI Symbol;Acc:MGI:98742]

Alleles

There are 3 alleles of this gene:

Allele Name Consequence Status Availability
sa31342 Essential Splice Site Available for shipment Available now
sa31341 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa31342
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000160 Essential Splice Site 78 427 4 10
ENSDART00000112817 Essential Splice Site 72 466 3 11
Genomic Location (Zv9):
Chromosome 3 (position 34799503)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 34584699
GRCz11 3 34714207
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAAGGCCACTGGCTATCATTACCGCTGCATCACATGTGAGGGCTGCAAG[G/A]TGAGACTTCCAGCGTCTGAAGCGCTTGACTCGTGATAAATCTGTATTTAA
Long Flanking Sequence:
TTATTATTATTAGAAAATGCTTTTATTCTTGCCGAAATAAAACAAAAAGACTTTCACCAGAAGAATAAATATTATCAGATATACTGTGAAAATTTTCTTGCTCTGTTAAACATCATTTGGCAAATATTTACAAAATAAAAGGGGGGCTAATAATTCTGACTTCAACTGTATATCACCATTCTCTTTTTGTCAGATGGCCAAATGGAGTGAAGAGGAAAAGAAAGAATAGTCAATGCTCTATGAACAGCACATCCGGTAAGAATCTGGTGTCACTGCAGTCAAAACCCTAAATATGATGGGCTTATGATGCCCAGGGATGTAGAGGTTGGTGTGTGTTTGTTTTCTGCTGCAGTCGCCTATTCTCTCCTCATCTTTTAGACAAGAGCATCTCTGTTCCTGGGTACGTTCCCAGTTATCTGGAGAAAGATGAGCCGTGTGTGGTGTGCGGAGACAAGGCCACTGGCTATCATTACCGCTGCATCACATGTGAGGGCTGCAAG[G/A]TGAGACTTCCAGCGTCTGAAGCGCTTGACTCGTGATAAATCTGTATTTAATCATTAAGCTGCTTTCTTCTGTCTGCACTGTACACAGGGTTTCTTCAGGAGGACAATACAGAAAAACCTTCATCCGTCCTATTCCTGTAAATATGACAGCTGCTGCATCATTGACAAAATCACCCGCAACCAGTGCCAGCTGTGCCGCTTCAGGAAGTGCATCTCAGTGGGCATGGCCATGGACTGTGAGTGTCCACACAAACAAACTATGTACTTATTATTTTGTTTGATGATTTTTTAAGTGTGTACGCCTTTTGTAAAGCTGCTTTGAAACATTAATTATTGTGAAAAGTGCTACACAAATATGTAAATAAGTAAAGGTTTATTTATGTACAGTGCATCCGGAAAGTATTCATAGCACTTCACTTTTTTCACATTTGTTTATGTTACAGCCTTATTCCAAAATAGATTAAATTCATTAATTTCCTCAAAATGCTACACACAACACCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa31341
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000000160 Nonsense 367 427 9 10
ENSDART00000112817 Nonsense 361 466 8 11
Genomic Location (Zv9):
Chromosome 3 (position 34786727)
Other Location(s):
Assembly Chromosome Position
GRCz10 3 34571923
GRCz11 3 34701431
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCATTCGAGCACTACATCAACCACCGCAAGCACAACATCTCCCACTTCTG[G/A]CCCAAGCTGCTGATGAAGGTGACGAACCTGCGCATGATCGGCGCCTGCCA
Long Flanking Sequence:
GAGTACCGAATCTTCTCCATTCTAAGATGGTACATAATCCACTGATTACAAGTTGGAAGAAATTTGTCCTTCCATTTTAGCAGTATAATAAGTCTAGCAATTAATGTTGAAAAAGAAATCATACTTTAGGTATTATTGTTTAATTTGGGATCTGTAATTAAATCAAATATTCCGACAATAGGGCAAGGGTCAATTGATGCATGCTAGATATTTGAAAAGAAATTAAATAGAATAATAAATGTATTTAATAAAGAAAATTCCAAACACATCTTTAAAATCTACATTACGTGTTATAAAATCATGTGTTTTAAAGAATGATTTAAAGATCATCCTTAAAGACTTGGCTTGAATTCGCTGTAGTTTTACAATCTTTATGTAATCCACCACACAGATCGCTCTGGACTGACATGTGTGGAGAAGATCGAGAAGTGTCAGGAGATGTACCTGTTGGCATTCGAGCACTACATCAACCACCGCAAGCACAACATCTCCCACTTCTG[G/A]CCCAAGCTGCTGATGAAGGTGACGAACCTGCGCATGATCGGCGCCTGCCACGCCAGCCGCTTCCTGCACATGAAGGTGGAGTGTCCAACAGAACTGTTCCCGCCGCTCTTCCTGGAGGTCTTCGAGGATCAGGAGGTGTGACCCAGAGACACAGCGGCAAAACAAACTCCACCTCATTTTGTTTTCTCGCAAAGCATACCAGAAGCGTTTTTTGTTTCTCACAAGCTCGTGCGCTCTCGAAACGGGACATGTACTTTATTTTGCATCGTCGGTCCCTCGTCTGCTTTTGTCTGGGATTTGTTTCCGGGTTGTCAGCCTCCACACGTTTCGACCCTGCCATTCAGATATTCCTCTCACAGACGGACAAAAGCTAGCATGCATCAACCTACCTCTCATACAAACATACCTCCCAATCTCAGAAGGAGCTTATTTTTAAAAGCGTGACAAAATAAAACAAAAAAAAGCGCCACATTTTTCAATAGCGGTTTCGGAAACGCTAG
Associated Phenotype:
Not determined