ZMP
ubtf
Ensembl ID:
ZFIN ID:
Description:
upstream binding transcription factor, RNA polymerase I [Source:RefSeq peptide;Acc:NP_001005395]
Human Orthologue:
UBTF
Human Description:
upstream binding transcription factor, RNA polymerase I [Source:HGNC Symbol;Acc:12511]
Mouse Orthologues:
Ubtf, Ubtfl1
Mouse Descriptions:
upstream binding transcription factor, RNA polymerase I Gene [Source:MGI Symbol;Acc:MGI:98512]
upstream binding transcription factor, RNA polymerase I-like 1 Gene [Source:MGI Symbol;Acc:MGI:35882
upstream binding transcription factor, RNA polymerase I-like 1 Gene [Source:MGI Symbol;Acc:MGI:35882
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa25244 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa33145 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa25244
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056614 | Nonsense | 339 | 735 | 11 | 22 |
| ENSDART00000126915 | Nonsense | 339 | 447 | 10 | 13 |
Genomic Location (Zv9):
Chromosome 3 (position 19940448)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 19901423 |
| GRCz11 | 3 | 20051163 |
KASP Assay ID:
554-7693.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GCCAGCGCTGGAAACTCCTCAAACAGGCCGAGAAAGACGCATACCAAAAG[C/T]GATGTGAACAGGTCTGTAATGCACTCATTCAAACAGTGCTTTTATTTGGC
Long Flanking Sequence:
GATATGTCGGTAACATTTTTTTTGATGGCCTATTTGAGTATTAGTAGACTGTCTGTTTAATATCTGCTGATATTGCTCCTTCAACAGACATTTAACTCACTATAAGGAACTTTGTAAGTACTTGTCAACTTACACTAACCCCAACCTCACAGTCTACTAATAATCTAATGAGAATTAGTTAACATGTAGATGCAATGTAACTTAAATTCAACAAATGGACCATCAAAATAAAGTGTGACCAATATTTCTTATCTTTCAAATGACCAGAATTGTTTTTTTTGAAGTTTTAGTTTTTGTACAGTGTGTATAAAGTCAAATCTCTCATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAAACGGTTATTCTTTGTTCTGTGCTGAGCTGATGTCCAGTATGAAGGACGTTCCCAGTACGGAGCGTATGGTCATGTGCAGCCAGCGCTGGAAACTCCTCAAACAGGCCGAGAAAGACGCATACCAAAAG[C/T]GATGTGAACAGGTCTGTAATGCACTCATTCAAACAGTGCTTTTATTTGGCACACTTCCATATGTTTGTCACCAGTTGATAATCTAAACCAGAGGTGCCCAAATGCAGTCTTGGAGGGCCGGTGTCCTGCAAAATTTAGTTCCAACCCCGATTGGACACGCCTAAACTAGCAAAACAAGCTCTTTTTAGGTATACTAGAAACTTCCAGGCAGGTGTGTTGCAGCTTAACTATGCAGGACTCTGGCCGTCCAGGACTGGATTTGGACATCTCTAAACAAACCTACGTTGGTGCATAAAAAGTAATTTCTTGCTTTAAATTTGCTCTACACAGAAAAAGAAAGAATATGAAGTTGAGATGAACCGCTACTTGTTAGTAAGTATACCTTAATCATAATCATTTTTATTCTTTGTTTTTATTTTCTTATACTTCTCTCTTTTATTCCTGTTTATGTAAAGCACTCTGAATTAGCTTTGTGTATGAAATGTTCTATATAAATAAAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa33145
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056614 | Nonsense | 556 | 735 | 17 | 22 |
| ENSDART00000126915 | None | None | 447 | None | 13 |
Genomic Location (Zv9):
Chromosome 3 (position 19937254)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 3 | 19898229 |
| GRCz11 | 3 | 20047969 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GATCCCCTGCCCCAGTGATAACCCCTGGGAAAAAGATGAAATTTGACGGC[G/T]AACCTAAGAAACCACCCTCGTAAGTTTATTCAGTGTGTGTGTGCAAGAAC
Long Flanking Sequence:
TTTCTACAAACAAAACTCTTCATGTGCTCTTTGTTATATGTAGTTTGCAACATATTGGTGTTGTGTTTTCCCTTCTTTTTTCCTGTAATGTACTTTAGTTGGTCTAAAAAGGATTTTTAAAAAGTCTTAAAATGACCCTCATAAAACCTGCTGAAGCCCTGATTATATACTAGTATATAATATATTAATCTCCCTCTTTTCTTTCACAGAATGATCGGGCGAAAGCTCAGAAAACCATGGAGGCCACCTGGAACACCATGGAGAAGAAGGAGAAGATCGTGTGGATCAAGAAAGCTGCTGAGGACCAGAAGAGATATGAAGTGAGTTCTGAAAAATTCCAAGAAATTAGTGTCTGCTGCCTACATTTTTTCATAGAAATGTAATGTGTGAAAGTATTCACCCCCCTTTTTTTATTCTTCTATCTTGAACAGAGAGAGCTGAGTGAAATGCGATCCCCTGCCCCAGTGATAACCCCTGGGAAAAAGATGAAATTTGACGGC[G/T]AACCTAAGAAACCACCCTCGTAAGTTTATTCAGTGTGTGTGTGCAAGAACTGATTATTTACAATTCTCACATTTAGACCTCCTAAATGAAGAACTACTAGTGTATGAGGAAGCTTAATTGACATGCTTCATCTATCTCACTGGTTCTACTTAAATCATTTGTACAGTTAAGTATACAGTTCTACCATACAGTTCTACCACTAACAATGTTTAGAATATTTAAATATATTAATACATATATTAATCAGTAAGTTACTGGTTTGTAGTGTATTTAATATATTAGTTTTATTTTGTAATTGAAGCTAATATGGCATAGTTCACCTTCTGTTGAACTGAAGAAAGCTGCAGATCTGTAACCATTGACTTCCATAGTAGGAAACATAAAGATGTACCAGTCTTCTTAATAATTCTCTCTTCACGCTTCTACAGGAATGGTTATCAAAAGTTCTCTCAGGAGATGCTGTCGAATGGCGAACTCAACCATCTGCCCATGAAAGAGCG
Associated Phenotype:
Not determined