ZMP
shhb
Ensembl ID:
ZFIN ID:
Description:
Tiggy-winkle hedgehog proteinTiggy-winkle hedgehog protein N-productTiggy-winkle hedgehog protein C-
Human Orthologue:
SHH
Human Description:
sonic hedgehog [Source:HGNC Symbol;Acc:10848]
Mouse Orthologue:
Shh
Mouse Description:
sonic hedgehog Gene [Source:MGI Symbol;Acc:MGI:98297]
Alleles
There are 6 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa8431 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa5719 | Nonsense | F2 line generated | Not yet available |
| sa2069 | Nonsense | F2 line generated | Not yet available |
| sa25111 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa8431
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056747 | Nonsense | 77 | 416 | 1 | 3 |
Genomic Location (Zv9):
Chromosome 2 (position 29769823)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 30071458 |
| GRCz11 | 2 | 30054991 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GAGCCAGCGGCAAWTACGAAGGCAAAATCACAAGGAATTCAGAGAGATTT[A/T]AAGAGCTGATTCCGAATTATAATCCCGATATCATCTTTAAGGACGAGGAA
Long Flanking Sequence:
CTCCCCCTGCCATAGATTTGCTCTGTAATTCATATGGGTAGACTGCCTCTACTCATAAGCGTCTGACCCTACCTCCCGTCAAACTAAGTCGCTCTTTCGTCTCCCACTTAGCTGTGACAGCCAACCTCCAATGTGCTCATTCAGTGGCTATCGAGAGCGGTCGTTATTGCACCTGCTTCGGTAGTGGTCGTTGGGCAGCATCCATCCGGTTCGCGCGAGAAGACCCTGAGAGTGACTAAACTTTAAAGACCAGAAGAGATAATTCAAACGTCATGGACGTAAGGCTGCATCTGAAGCAATTTGCTTTACTGTGTTTTATCAGCTTGCTTCTGACGCCTTGTGGATTAGCCTGTGGTCCTGGTAGAGGTTATGGAAAACGAAGACACCCAAAGAAATTAACCCCGTTGGCTTACAAGCAATTCATCCCCAACGTTGCCGAGAAAACGCTTGGAGCCAGCGGCAAATACGAAGGCAAAATCACAAGGAATTCAGAGAGATTT[A/T]AAGAGCTGATTCCGAATTATAATCCCGATATCATCTTTAAGGACGAGGAAAACACAAACGCTGACAGGCTGATGACCAAGGTATGGACCAGGCGTGCGCAATTGCCCAAACGCACACACTTAGAATAGTGGATCTCCTTTTAGCTTTTAGCTCTGGGCTATATGAATGGCTATTGAGATTATTCAAATACTGATTGAGCATTACAGGAGCTGTAGATTAATATGCTGTGTTCTTTAACTTTGCAGTGCAAAGCATACATGTTTTATTACATAACTAGCAAATAAATAGTTCTTGGTGTAACTACAATAGGTTCTCATATTGCACCAGGATGTAGGAACCATTTTTGGTTGTAACAGAAGCTTTATTACATATTTATAGCTTTCCGTGCACTTTGGAGAAACTGACAGCGCTAACTGTTTAACTGTTGACAGCCCGGCAGTGGTATAATGGTTTTACCAAACTGCTGGACGTATATTTTCAGATTAAACATCTACATGCCA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa5719
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056747 | Nonsense | 266 | 416 | 3 | 3 |
| ENSDART00000056747 | Nonsense | 266 | 416 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 2 (position 29766383)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 30068018 |
| GRCz11 | 2 | 30051551 |
KASP Assay ID:
554-3388.1 (used for ordering genotyping assays)
KASP Sequence:
CGACAACGAGAAGGCAATTCATCGTCATCGAGACGTCAGAACCTTTCACC[A/T]AGCTCACCCTCACTGCCGCGCACCTAGTTTTCGTTGGAAACTCTTCWGCA
Long Flanking Sequence:
GTGTAAACAGTTTTACCAAACCAAAGGGATCAGGGAAAAGCACAGTCTGTAGGCTTGATTTAAATGACAATGTCTGATGACTTTGTGTAAATTCAGCAGCCAAAGTGACCAGACAAGCGTTTCAACACTTGCTTCTTGACAGTCATCACACGAGTTTGGATCAATTCCAAATCACCACCATTATGTCAAAACTTTGCCAAAGCATCGATTTTAGCAAAGTGCTTTATGAATATCTGCCAAAGATATCTATTTATTTGTGTTTGTATATCTTCTCAGAAAATTCAGTGGCTGCTAAATCAGGAGGATGTTTTCCTGGGTCTGGGACGGTGACACTTGGTGATGGGACGAGGAAACCCATCAAAGATCTTAAAGTGGGCGACCGGGTTTTGGCTGCAGACGAGAAGGGAAATGTCTTAATAAGCGACTTTATTATGTTTATAGACCACGATCCGACAACGAGAAGGCAATTCATCGTCATCGAGACGTCAGAACCTTTCACC[A/T]AGCTCACCCTCACTGCCGCGCACCTAGTTTTCGTTGGAAACTCTTCAGCAGCTTCGGGTATAACAGCAACATTTGCCAGCAACGTGAAGCCTGGAGATACAGTTTTAGTGTGGGAAGACACATGCGAGAGCCTCAAGAGCGTTACAGTGAAAAGGATTTACACTGAGGAGCACGAGGGCTCTTTTGCGCCAGTCACCGCGCACGGAACCATAATAGTGGATCAGGTGTTGGCATCGTGCTACGCGGTCATTGAGAACCACAAATGGGCACATTGGGCTTTTGCGCCGGTCAGGTTGTGTCACAAGCTGATGACGTGGCTTTTTCCGGCTCGTGAATCAAACGTCAATTTTCAGGAGGATGGTATCCACTGGTACTCAAATATGCTGTTTCACATCGGCTCTTGGCTGCTGGACAGAGACTCTTTCCATCCACTCGGGATTTTACACTTAAGTTGAGACTGCTGCTGTACATTATCACTATGTGGGACTCAAATGTATCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa2069
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056747 | Nonsense | 266 | 416 | 3 | 3 |
| ENSDART00000056747 | Nonsense | 266 | 416 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 2 (position 29766383)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 30068018 |
| GRCz11 | 2 | 30051551 |
KASP Assay ID:
554-3388.1 (used for ordering genotyping assays)
KASP Sequence:
CGACAACGAGAAGGCAATTCATCGTCATCGAGACGTCAGAACCTTTCACC[A/T]AGCTCACCCTCACTGCCGCGCACCTAGTTTTCGTTGGAAACTCTTCWGCA
Long Flanking Sequence:
GTGTAAACAGTTTTACCAAACCAAAGGGATCAGGGAAAAGCACAGTCTGTAGGCTTGATTTAAATGACAATGTCTGATGACTTTGTGTAAATTCAGCAGCCAAAGTGACCAGACAAGCGTTTCAACACTTGCTTCTTGACAGTCATCACACGAGTTTGGATCAATTCCAAATCACCACCATTATGTCAAAACTTTGCCAAAGCATCGATTTTAGCAAAGTGCTTTATGAATATCTGCCAAAGATATCTATTTATTTGTGTTTGTATATCTTCTCAGAAAATTCAGTGGCTGCTAAATCAGGAGGATGTTTTCCTGGGTCTGGGACGGTGACACTTGGTGATGGGACGAGGAAACCCATCAAAGATCTTAAAGTGGGCGACCGGGTTTTGGCTGCAGACGAGAAGGGAAATGTCTTAATAAGCGACTTTATTATGTTTATAGACCACGATCCGACAACGAGAAGGCAATTCATCGTCATCGAGACGTCAGAACCTTTCACC[A/T]AGCTCACCCTCACTGCCGCGCACCTAGTTTTCGTTGGAAACTCTTCAGCAGCTTCGGGTATAACAGCAACATTTGCCAGCAACGTGAAGCCTGGAGATACAGTTTTAGTGTGGGAAGACACATGCGAGAGCCTCAAGAGCGTTACAGTGAAAAGGATTTACACTGAGGAGCACGAGGGCTCTTTTGCGCCAGTCACCGCGCACGGAACCATAATAGTGGATCAGGTGTTGGCATCGTGCTACGCGGTCATTGAGAACCACAAATGGGCACATTGGGCTTTTGCGCCGGTCAGGTTGTGTCACAAGCTGATGACGTGGCTTTTTCCGGCTCGTGAATCAAACGTCAATTTTCAGGAGGATGGTATCCACTGGTACTCAAATATGCTGTTTCACATCGGCTCTTGGCTGCTGGACAGAGACTCTTTCCATCCACTCGGGATTTTACACTTAAGTTGAGACTGCTGCTGTACATTATCACTATGTGGGACTCAAATGTATCTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa25111
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000056747 | Nonsense | 364 | 416 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 2 (position 29766088)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 2 | 30067723 |
| GRCz11 | 2 | 30051256 |
KASP Assay ID:
554-7612.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GGTCATTGAGAACCACAAATGGGCACATTGGGCTTTTGCGCCGGTCAGGT[T/A]GTGTCACAAGCTGATGACGTGGCTTTTTCCGGCTCGTGAATCAAACGTCA
Long Flanking Sequence:
ATCAGGAGGATGTTTTCCTGGGTCTGGGACGGTGACACTTGGTGATGGGACGAGGAAACCCATCAAAGATCTTAAAGTGGGCGACCGGGTTTTGGCTGCAGACGAGAAGGGAAATGTCTTAATAAGCGACTTTATTATGTTTATAGACCACGATCCGACAACGAGAAGGCAATTCATCGTCATCGAGACGTCAGAACCTTTCACCAAGCTCACCCTCACTGCCGCGCACCTAGTTTTCGTTGGAAACTCTTCAGCAGCTTCGGGTATAACAGCAACATTTGCCAGCAACGTGAAGCCTGGAGATACAGTTTTAGTGTGGGAAGACACATGCGAGAGCCTCAAGAGCGTTACAGTGAAAAGGATTTACACTGAGGAGCACGAGGGCTCTTTTGCGCCAGTCACCGCGCACGGAACCATAATAGTGGATCAGGTGTTGGCATCGTGCTACGCGGTCATTGAGAACCACAAATGGGCACATTGGGCTTTTGCGCCGGTCAGGT[T/A]GTGTCACAAGCTGATGACGTGGCTTTTTCCGGCTCGTGAATCAAACGTCAATTTTCAGGAGGATGGTATCCACTGGTACTCAAATATGCTGTTTCACATCGGCTCTTGGCTGCTGGACAGAGACTCTTTCCATCCACTCGGGATTTTACACTTAAGTTGAGACTGCTGCTGTACATTATCACTATGTGGGACTCAAATGTATCTTTATTTTCTGTAAGAAAAGCCTTAAAGTGTTCATTGAATAATTTATTTCTATTGGATCACCTGTCTCTGGAAACGTACCCACCAATTCAAGCATGATGTGACCGTTTTTGTGTGCGCATTTTGTGAAACATACAAGAGATTATATGAGATATGAGAAAGCGCAGGGCTGTGCAGTGTGCAGCGCTCTATTTTATCGGATAACCATAAAGGATGGCGCTCAAAAGTTATATTTTTGTACTCAGATTTGTATATTAGATTTTTGATGGCTCTAAAAGCATTTCCAGTATCACATTTCG
Associated Phenotype:
Not determined