Busch Lab

ZMP

si:dkeyp-1a11.3

Ensembl ID:
ENSDARG00000078822
ZFIN ID:
ZDB-GENE-070912-641
Description:
Novel protein similar to vertebrate coiled-coil domain containing 18 (CCDC18) [Source:UniProtKB/TrEM
Human Orthologue:
CCDC18
Human Description:
coiled-coil domain containing 18 [Source:HGNC Symbol;Acc:30370]
Mouse Orthologue:
Ccdc18
Mouse Description:
coiled-coil domain containing 18 Gene [Source:MGI Symbol;Acc:MGI:1922974]

Alleles

There are 7 alleles of this gene:

Allele Name Consequence Status Availability
sa691 Nonsense Available for shipment Available now
sa14616 Nonsense Available for shipment Available now

Mutation Details

Allele Name:
sa691
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112829 Nonsense 415 1321 10 27
ENSDART00000132167 Nonsense 415 779 11 18
Genomic Location (Zv9):
Chromosome 2 (position 10335228)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 10760324
GRCz11 2 10543923
KASP Assay ID:
554-0599.1 (used for ordering genotyping assays)
KASP Sequence:
AAACATTACTTGAACCTGTTRCCCTGTTCACATACAGTAGGTGAGCGCTA[T/A]CAGAAGCTTCTGGCGGTTCTTCAGATGGTTGAGAAGGAGAAGAGCCRTCA
Long Flanking Sequence:
TGGGTTTCCTCCGGGTGCATGTGTGTGATTGAGTGTGAATGGGTGTTTGCCAGTGATGGGTTGCAACTGGGAGGGCATCCGCTGCATAAAAAACATATGCTGGATAAGTTGGCACCTTGTCGGTTCATTCCGCTGTGGTGATTATTGTGATTATTTTGCTAGCGCACATTCATTTTCTTTTCGGCTTAGTCCCTTTATTAATCAGGAGTCGCTCCTGATTAATAAAGGGACTAAGCCGAAAAGAAAATGAATGTGCGCTAGCAAAATAATCACAATGCTATTTTGGAATGACTGTTGTTTCAGAATCGAGAGGGTGTGCTGTGTGTGAACCCTTGTTTGCTGCCTGCACTTTCTTACACAAACACCACTGAATCTCTCAGACACAAACCTGGTGAGCATTTAATTAATCTAACTTAGACTGACACTTCCACTTTTCTGCTTTACTGGACAAAACATTACTTGAACCTGTTGCCCTGTTCACATACAGTAGGTGAGCGCTA[T/A]CAGAAGCTTCTGGCGGTTCTTCAGATGGTTGAGAAGGAGAAGAGCCGTCAGGTCAGCGCTGCTCAGAGCCTGCAGGAGAGACTGAGCAGAGCCCAGGAAGAGATCTCCTCTCTGCAGAACTCCATCACTGAGAGAGCTTCTCACTACCATCAGCTCCACAACCAGCTCCTGGAAAAGGCTACACAGGCCACTGCCTTGGAGAAAGAGGTGAGCGTCCCATCACTGCAATGTTTCCTGCTCAATGGCATTTGAATTTTGGCTGCCAAGAAAAAACATCTGTTTGTCAAGTAAGAATTTGCATTTAGGGCTCCAAGTTAATCAAGAACTATTATGCTAAGATGTGTGTTGAATACTTATAGAAACATGTAAGACTTGCATAGCTGCATCAAAGTAGAAAAACGCGAACGTACAGAAAATAAAAGGCAGTTTGCATTGTATCATAATTACATGTGAATGCATATGATTGTTTTGCATGATTATTATTGTTAACAATATTATTT
Associated Phenotype:
Normal
Stage Entity Quality Tag
Larval:Day 5
ZFS:0000037		 whole organism
ZFA:0001094		 quality
PATO:0000001		 normal
PATO:0000461

Mutation Details

Allele Name:
sa14616
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000112829 Nonsense 506 1321 11 27
ENSDART00000132167 Nonsense 506 779 12 18
Genomic Location (Zv9):
Chromosome 2 (position 10329038)
Other Location(s):
Assembly Chromosome Position
GRCz10 2 10754134
GRCz11 2 10537733
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
YTGCGTGTAGCCGTCCTAGAGAAACAGCWGCAGGAGAAGAGCTCTGCTTA[T/G]TCACAGGCTGTAATGAAAACAGGRCAACTTGAASAAGACCTTCTGGTAAC
Long Flanking Sequence:
AATGTAATAGAACATTTCTATAATAATGCTAAAAGCTTTATGCTAATAACCAGACATATTTAAATACTTAAATATTAATTAAATATGAGCAAATTAATTTGAGTATCTTAATTTTTTATGAAAAGAAATGTATATTTTTATTTTAAAACATACAATAAATTCATCAAAGGTGTCAATATTTTTTCTGCATATAAAAATGCAACATTTCTTTTGCACAATTCTATTTCACATTATAAGTTTTTACTATATTTTAGCTGCATTAAAATAAATGCAATGAGCTAAGGTGAGCTAAGGAGATTAATTAAAAACTTTTTTTAAAATACCTCCCGACCATACCTTTGATTGTTTGTGTACCTTTCAAGTATTTCACTACAGTTGCCCTTTGTTTTAAACATGGCAGAAGTATATTAATTAACCAGAAGTTGTGTTTATTAGCTGAAAAAGAAGAATTTGCGTGTAGCCGTCCTAGAGAAACAGCTGCAGGAGAAGAGCTCTGCTTA[T/G]TCACAGGCTGTAATGAAAACAGGGCAACTTGAACAAGACCTTCTGGTAACACACAATATCACACTTAAGACATTTCAAAATCAAACTACAGATTTATCCAGCTCTCTGTATCTGAATGATACTGTTCTCTCGGTTTAATCAGGAGAAGACCAGCAGCATTCAGCACTATCAGTCAGTCTTGAACAAGAAACAGAGGGAATATCAGCAGACTGTTGACAAAGTCAAGTTGGCGCAGTCACACAAATGCAAAGAAATGGAGGACGAAAGAGAGGTGGTACGTGTGCATTAATTAATTATATTAATTATATAAAATATTATATTATATGCCTATGCTTACAGTACTTATTCATTGTTGCTCTTATAGTTGTGTAAATTGCTTCCTTGTCCTCATTTGTAAGTCGCTTTGGAAAAAAGCGTCTGCTAAATGACTAAATGTAAATGTATATTGCACTCAAAATGTTCTCAAAATCCAGTGAAAGTAATGAAAAAGTGTGTGCGTG
Associated Phenotype:
Not determined