ZMP

ck2a1

Ensembl ID:

ENSDARG00000002082

ZFIN ID:

ZDB-GENE-990415-27

Description:

casein kinase 2 alpha 1 [Source:RefSeq peptide;Acc:NP_571327]

Human Orthologue:

CSNK2A1

Human Description:

casein kinase 2, alpha 1 polypeptide [Source:HGNC Symbol;Acc:2457]

Mouse Orthologue:

Csnk2a1

Mouse Description:

casein kinase 2, alpha 1 polypeptide Gene [Source:MGI Symbol;Acc:MGI:88543]

Alleles

There are 2 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa25018	Nonsense	Mutation detected in F1 DNA	Not yet available
sa42759	Essential Splice Site	Mutation detected in F1 DNA	Not yet available

Mutation Details

Allele Name:

sa25018

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000008297	Nonsense	41	395	5	15
ENSDART00000056551	Nonsense	41	395	5	16
ENSDART00000140880	Nonsense	41	140	5	8
ENSDART00000146886	Nonsense	41	141	5	8
ENSDART00000147373	Nonsense	41	232	5	11

Genomic Location (Zv9):

Chromosome 16 (position 33749690)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	31487590
GRCz11	16	31445517

KASP Assay ID:

554-7381.1 (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

TGTGTTAAATTCTTATTGTATGTTGTGCAGAAACCAAGATGACTATCAGT[T/A]AGTGCGGAAGCTTGGCCGGGGAAAATACAGTGAAGTGTTCGAAGCCATAA

Long Flanking Sequence:

TAGACAAATATATGCCGCATATAAATATACAAATATGTAGTCGCATGACTAAACATAATAATAGTATTGCATTATATTTATTCTCTTGTTTATTTTTTGACTTTTTGTCCTCCAATTGCTTTTATGTTGTGTTTTAGTGTAGTTTATTTTCCATTTTAACATATGATTGTAATCTGTCAAATGTATTCCCGATTGTCCTAGAGGTTTCTCATTGTGCTGTTGTTGTCTTTTCAGGTGTTTCAGGGAATCCCGTGTGTAGAATATGTCTGGCCCTGTCCCAAGTCGCTCTCGAGTTTACCCTGATGTAAACACACAGCGACCCAGAGAGTACTGGGACTATGAATCCCATGTGGTGGACTGGGGGTGTGTTTCCTTTAATATTGATTAATGATATATATTTTTTGCGACTATTGATAAAACATGCGTGGTATGTCTGATGCTTTCATTGTTTGTGTTAAATTCTTATTGTATGTTGTGCAGAAACCAAGATGACTATCAGT[T/A]AGTGCGGAAGCTTGGCCGGGGAAAATACAGTGAAGTGTTCGAAGCCATAAACATCACTAACAATGAGAAAGTAGTCGTCAAAATACTCAAGGTATCATCTAATATTTGCATTCTCACTGTAAACACAATTTGGTTGAAGGAATTTCAGGTTGTTTAATTTTTGTGTGTGTGTTTTAGCCAGTGAAAAAGAAGAAGATTAAACGAGAAATAAAAATTCTGGAGAACTTGAGAGGAGGCCCCAACATTATAACACTTTTAGACATCATAAAGGATCCTGTGGTGAGTTTATTGAAATAGTAAGGCGCTTGCACTAAAGTTAGAAAAACAAATATAGGTGTTTTAAACAATACTTCTTTTTTTTTATAAAATTGTTTTTATTTTCCGTAAAGCTTAATTCACTGACAAAATAATAGATATACATGAGTGATTTTGTTTGGCTCTTAGTTTGTAACACATTGTGCTTTGTTTTTCATGCCCAGTCCCGAACACCAGCGCTGGTA

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa42759

Status:

Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Not yet available

Mutation:

T > A

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000008297	Essential Splice Site	355	395	14	15
ENSDART00000056551	Essential Splice Site	355	395	14	16
ENSDART00000140880	None	None	140	None	8
ENSDART00000146886	None	None	141	None	8
ENSDART00000147373	None	None	232	None	11

Genomic Location (Zv9):

Chromosome 16 (position 33746372)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	16	31484272
GRCz11	16	31442199

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

GGAATGGCTGCTAGTTCCACACCCGTCAGCTCTTCTAGCTTGATGGCAGG[T/A]AAATGATTTATTTTCTCCACAGCACTTCATCTCTGTTTGAAATAACTCAT

Long Flanking Sequence:

GCTCATATTTGATGCATTTTGACTGTCCTTTATTATCTTATATGAATTAAATATAGAATTCATTACAGACATCAGGTTGCGTCCTCTATGCTGAGAAGCGAATCTTGGCTGGATGATGAAATCCTTAGTTTATAAGGAGTAAATGCTGGCATGTTATTCCTCGCTGCTAATTGATGGGTGTTTCTACCTCAGGGTTATTTAATTTAAGATTAGAATTTGTTTTCATATATAAACTATTTATTATTATTATTATTATTATTGACAAGTTATTGTTTGTAACATTTTTAAAAGCAGTTTTATAATTTTAGATGACTAGAAAATGTAAATGTTTTTTTTTAATGTTGATGTTCTGTATTTTTAATTATTATAATAATTTTAATATTGATGTAAAATTGTTTGTTTGTTAAAGACCCCATAGTTAAAGACCAGGGTAGAGGAGCACCGGCTGCTGGAATGGCTGCTAGTTCCACACCCGTCAGCTCTTCTAGCTTGATGGCAGG[T/A]AAATGATTTATTTTCTCCACAGCACTTCATCTCTGTTTGAAATAACTCATGCAAAAATGAACAATGTTTTACATTATTTACATGGTTTTTTATTTCAAACCTGCATTGGTGAGGGAAATGTATTTTGAGTCATGAGTATGTTCCCATCACTGACTTTGTATTGACAAACTTTAAAATAAATAGTTTTCTACAGAAGACAGCGATTTGGAATAAACTTTTTGGGTGCAACGTTTAATTTAAAATTAGTTTAAAATGTTGCTTGCTTTTTTTCTGGAAAATATATTAAATAAAGAAACAATCTTAAATTTATAGTGATAAATTTAGATTTTGGAGGGGTTTTCATATCTTTGAATAAGTTATAATGCATTTATAACCCATTAAAAGGATAATACACCTACAAATGACAAATATCATGTTGTTCCAAACACAAGCACAACTGCCACTTTGAAGGCCCAGAAGTGTAGTTTAAACATCCATTACTCTAATTTGCCGAGTCGAAG

Associated Phenotype:

Not determined