ZMP
si:dkey-162b3.1
Ensembl ID:
ZFIN ID:
Description:
polypeptide N-acetylgalactosaminyltransferase 2 [Source:RefSeq peptide;Acc:NP_001121823]
Human Orthologue:
GALNT2
Human Description:
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) [Sour
Mouse Orthologue:
Galnt2
Mouse Description:
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 Gene [Source:MGI
Alleles
There are 5 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa24933 | Nonsense | Mutation detected in F1 DNA | Not yet available |
sa17374 | Nonsense | Available for shipment | Available now |
sa14540 | Essential Splice Site | Available for shipment | Available now |
sa12860 | Nonsense | Available for shipment | Available now |
sa28108 | Essential Splice Site, Missense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa24933
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > G
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000021360 | Nonsense | 21 | 565 | 1 | 16 |
ENSDART00000136217 | Nonsense | 21 | 559 | 1 | 16 |
Genomic Location (Zv9):
Chromosome 13 (position 24442455)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 24088115 |
GRCz11 | 13 | 24218565 |
KASP Assay ID:
554-7488.1 (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TCTAGGATGTATCTATGTTTCGCTGTGCTTTGGGTTCTGGGCATAGCTTA[T/G]TATTTCTATTCGGGAACAACGCTGAGTCGAAAGGTAGGTTTTTCTGTTTT
Long Flanking Sequence:
CGAGAGAAGGCTGGGTTACAAGATGAGCAGATAAAAAAAATATGCAACAGTGGAAAAAAGCAATCGTATTTTATGACTTTCGAGAGAAAGCGTCAGACCATAATACTATGTTTGTGAAATTTTCTCCAACATGCGCCAAACATTGATTCCTCGGCGCATCTTGAGGAGGTTCAGGCTAACGATGGATGTCTCCACCCCCGGCCCGCCTCCGTGCGCTTCTCTGCGGAGCGTGATTGGATTAAAGTCGGTTACCCTTTCCCCTCTAACCCGGTGATGCTGGCTGTTTCCTGCTTCTTCCTCTAGCCAACCGCTGCTGCTGCTGAAGCCTTGTTAGTTGAGCGCTGTGGCCACAGCGAGACGCAGAACGTGGACGTCAGTGGCTTTTCAAGGCACAAACCTCGAGCGAGCCACTGTATCACCGCATCAAAAAACACGGCAATGCGCAGGAAATCTAGGATGTATCTATGTTTCGCTGTGCTTTGGGTTCTGGGCATAGCTTA[T/G]TATTTCTATTCGGGAACAACGCTGAGTCGAAAGGTAGGTTTTTCTGTTTTCTGCTTTCTTCATGTTGAATGCCGCTGGAGTGGTGCGAATTTAAGTTGTTTGTGGCGATTGTATTGAAATGTTTCGTGTGTGTGTGGATGTGGAAAAACAGTCGGCATGACGGTAGAGAGTCCGCACGTTTAAATAGCCAAAGTCTGTAGACTGGGCTCACAAAGATAGTGTTATCGCTCCGTGCTGTGATTTCTCTGCCAGCCAGGCTATCAAAGAACCATGTTTTGCTTAACTGCATTCACACAATATCACGAGTCTTTCTATTAAAATGAGTTTTTTTCCCTTGCCGATTAAATTTAGGATCGAAAGCGACGATGACCGGTTAAAAATGAGCTGTTTAAATAGTAAACGACACTGTAGTTGTAAACCATTCATTAAACATGTTTGATATGAATTGTAAACATCTGCAATGTTACAGGGAAGCAGTAAAAAAACTAACGTTAGCGTTA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa17374
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000021360 | Nonsense | 35 | 565 | 2 | 16 |
ENSDART00000136217 | Nonsense | 35 | 559 | 2 | 16 |
Genomic Location (Zv9):
Chromosome 13 (position 24363923)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 24009583 |
GRCz11 | 13 | 24140033 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CAAATGCCTTTTMTGCTCACAATCTGTTCTCCTCTTTGGCAGGATGACTG[G/A]AGTGGCATTAATTCAAACCGAATTCAAACACACAGYAATGCAGATGACAA
Long Flanking Sequence:
ACACTTCTGTTCAATCCTGAGAAAATCTATTTAGTTCTTTTGAATTATAGCTGTCAGTTGATCTGCTACAATTTCTTCCTACTAAAATAAAATGCTTATGATATGATCAAACTCACTGAGAGGAAAAAGATACACAGCAATGCACAAACTCCTGATCTGTGGTTACTACAGCAACTAGACTTTTATAAATAACATTAGACTTAATTCAATGGAGAATAAATTACGTTTGAAGTAATTGTGCATTTTTAGGTTTGGACTTCATTGTTTTTGGCTAAAAGCTGTTATTCTTTCTGCCTTGAAATCTGCATGAAGAAAAATGTCAGATTAAGAGTACTGTTAGTGTGAATATGTGGTGTCAAAGGCAGTGCTTGCAGCCCTCAACGGCCGTAACCACTTTCTCAATACCAGTTACTGTTTAATTTGTTTTTCGATTACCATTCTAACCCTTACCAAATGCCTTTTATGCTCACAATCTGTTCTCCTCTTTGGCAGGATGACTG[G/A]AGTGGCATTAATTCAAACCGAATTCAAACACACAGCAATGCAGATGACAAAGACCACAGCCTTGAAAGTCTTCCTCTAGGTAAGAGCCAACCTGACATCTCATGTGCATAATCGTGTCAGGATTATCCCGCACTCATAATTCAACTTTTCCCTGCTTCTATCCCAAATGAATAATGGAGTGTTTCTTCTCAGGTATGGGCTTTAATGAACAGCCCGCACGAAACAAGGCATATTTTTTTATTCCCTTCATAAACAGGACTTAACCTGAGGTTATCTGTGGAAGCAGGTGTAGAAAGTCTTACTTGAGGGCTCCTGAAATGCATGAGAGTAATTTAAGAGTGGCTGTGTTACGGGCCCTAAGACAAGAGCTCTGTTTCTTCGCTCTTTATTCCCCTTTTTGTAAATGTATTCCAACTAAACTTGGCTGCTTAATACATTATGATAATAACATATGCTTTTTATAGACTTGCTGCATTTTAAAGTAGTATTATAGTAGGTTT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa14540
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000021360 | Essential Splice Site | 290 | 565 | 9 | 16 |
ENSDART00000136217 | Essential Splice Site | 290 | 559 | 9 | 16 |
Genomic Location (Zv9):
Chromosome 13 (position 24310815)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 23956475 |
GRCz11 | 13 | 24086925 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
CCCTGGAACAAAGACRAGCTCGACAAGGAAACCCCATYGCTCCTATCAAG[T/A]AAGAAAGCAATCGTGAAWCTGCTGATGTGTAATTGTCAGCYGCTTTGSGA
Long Flanking Sequence:
CTCAATTGGTTCCAAACCTTGCTGAACCTAAAAAAAGCGATATATTTTGTAGAAAGCTGGAAACAAGTAATCTTTGACTTCCAAAACATTTTAGTCTTCTGAATATTTAAATTGTTGTTCAACAGAAGACAGAAACCCATGTAGGTTTGTGACAAGTAAATTTTACATTTAAGTAAATGATGACAGAATTTTCAGGTTTTGATGAACTATCCCTTTAAAGTATATGCTATTGTGTGATTCTGAACAAATGTTCATTCTTTTTTCATTAATGAATTTGTAATATAACTAATCTGCCTCTTTATCCTCCCACCTGACACATGGCTGAACATGGCAATGAGCCTACTTTTACTGTAACATCACTTGAGCTTTCAGAACTTGATCCCTAAAGTAATGTGTCTAATCTTTATCCAGGTTTTGATTGGAATCTGGTTTTTAAATGGGACTACATGACCCTGGAACAAAGACGAGCTCGACAAGGAAACCCCATCGCTCCTATCAAG[T/A]AAGAAAGCAATCGTGAATCTGCTGATGTGTAATTGTCAGCTGCTTTGCGATTTTATTACTATTATTCTAGGGATTTTTTTTTCTCATTCTATATTGGCTGTTTAATGTATTGACTCTTTTGAAGTCTAACTCCAGCTGTTGGTGCTCAGTATAGTTTTGATTTACAAAGACTTTGTACTTTTGAAGACTGAGTAAAATACTTTTACCTACTGCTGCTGATGATGTCATTGCTATGTATGCATTGCATACTGAACTGTGATTGGTTTTCAGACCTAAGTGGTCATGTCTATAACACTTATATTTTATATATTTCTTTTACATATTTAGGCAACTCCATTTTTAGTGCTGGTAATAATCTGAAAATGCGAATCTAGATGCATCAAATTTTCATGTAAAAATGCTATCAGATTTTGAACAAAAGGGAAAAAAGCTCAAATAAATAAATAAATAAATAAAATGTTTTAAATATTAAAATATTTCAATATAAAAAAATTGTTAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa12860
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000021360 | Nonsense | 440 | 565 | 14 | 16 |
ENSDART00000136217 | Nonsense | 440 | 559 | 14 | 16 |
Genomic Location (Zv9):
Chromosome 13 (position 24298155)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 23943815 |
GRCz11 | 13 | 24074265 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TGTWGTTTAGAGTGCCGGAWCATCAGGACATTGCATTTGGAGCTCTTCAG[C/T]AGGGTCAAAACTGTCTGGACACACTGGGCCATTTTGCAGATGGTGTGGTG
Long Flanking Sequence:
GAAAAGTACTCAAAAGCCTACTTTTTTCCTTTCTTTATATTTTTTTATTTTTTTATAAAGCTGTCAGGTGAAAAAGTAAAGCTGCTGCTCTTTATTTGCTTTTCTGTACTCTTCTTTCACATTCATTTAAACCCTGAATTAAACACCAGGCATGAGCAAGAATGTTTTGCTCATCTACTTATGATTATTATCCAATTGCATCTTAAAGCCAGCTGTAAACATGAGCTTTGATAGCCTTAAAAGAATTGAAAATTGCAAGTTTTTTTATAAACTATCCCTTAAACTGTGTAAGCTGGGCCTCTTTTTAATTGATGTTTAACTATGCAAATTAAGGAAAATTAATAGAATGAAATTCAATGTTTTTTAGTCTTAAAGCTTTCTTTTCACTACTGGAAACTACAGTCTCAAATACTTCAGCAGTGTAATCATACCTATCCTCGTGCTTGTGTCTGTTGTTTAGAGTGCCGGATCATCAGGACATTGCATTTGGAGCTCTTCAG[C/T]AGGGTCAAAACTGTCTGGACACACTGGGCCATTTTGCAGATGGTGTGGTGGGGGTTTACGAGTGCCACAACGCTGGGGGCAATCAGGTATCAAACAAAACGCAGGTACTCAACAGTCTTCTAATGTCTGGTGCAGAGCACTGGGTGATGGACTGGCAGTGAGTCTGTGTTAGCTGTAAATCATAGACACGCTTGTGGAGGGTGAGTGAGTGGTGTATAGATGAGACACGCTAGTTTCTGGATCACTTTACATGGTTCTTGCTGTAGACATGTGTGCATGTCTAAAGGATTTAAAAGGGTCTGTGTTTTTCTGTTTCAATATGATGTGATATGAAGTAAATAATATAATACATTTACATTTAGTTTAAATATATATTTCTATACATTGTATTGCATTAAATGACTTTATAATAATATATTGATGACAATATAAATAAGTAATAACGTATACATTTTATAACTAGTTGTTTTACTAGTATTGATGTGAAAAGTGCAGTATAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa28108
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Essential Splice Site, Missense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000021360 | Missense | 469 | 565 | 14 | 16 |
ENSDART00000136217 | Essential Splice Site | 468 | 559 | None | 16 |
Genomic Location (Zv9):
Chromosome 13 (position 24298067)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 13 | 23943727 |
GRCz11 | 13 | 24074177 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AGATGGTGTGGTGGGGGTTTACGAGTGCCACAACGCTGGGGGCAATCAGG[T/A]ATCAAACAAAACGCAGGTACTCAACAGTCTTCTAATGTCTGGTGCAGAGC
Long Flanking Sequence:
TCTTTATTTGCTTTTCTGTACTCTTCTTTCACATTCATTTAAACCCTGAATTAAACACCAGGCATGAGCAAGAATGTTTTGCTCATCTACTTATGATTATTATCCAATTGCATCTTAAAGCCAGCTGTAAACATGAGCTTTGATAGCCTTAAAAGAATTGAAAATTGCAAGTTTTTTTATAAACTATCCCTTAAACTGTGTAAGCTGGGCCTCTTTTTAATTGATGTTTAACTATGCAAATTAAGGAAAATTAATAGAATGAAATTCAATGTTTTTTAGTCTTAAAGCTTTCTTTTCACTACTGGAAACTACAGTCTCAAATACTTCAGCAGTGTAATCATACCTATCCTCGTGCTTGTGTCTGTTGTTTAGAGTGCCGGATCATCAGGACATTGCATTTGGAGCTCTTCAGCAGGGTCAAAACTGTCTGGACACACTGGGCCATTTTGCAGATGGTGTGGTGGGGGTTTACGAGTGCCACAACGCTGGGGGCAATCAGG[T/A]ATCAAACAAAACGCAGGTACTCAACAGTCTTCTAATGTCTGGTGCAGAGCACTGGGTGATGGACTGGCAGTGAGTCTGTGTTAGCTGTAAATCATAGACACGCTTGTGGAGGGTGAGTGAGTGGTGTATAGATGAGACACGCTAGTTTCTGGATCACTTTACATGGTTCTTGCTGTAGACATGTGTGCATGTCTAAAGGATTTAAAAGGGTCTGTGTTTTTCTGTTTCAATATGATGTGATATGAAGTAAATAATATAATACATTTACATTTAGTTTAAATATATATTTCTATACATTGTATTGCATTAAATGACTTTATAATAATATATTGATGACAATATAAATAAGTAATAACGTATACATTTTATAACTAGTTGTTTTACTAGTATTGATGTGAAAAGTGCAGTATACATATTGAATTTGAATATATCCTTTCTATATATTGAATTGTATTTCATTATATTACTTTGTAATGACAAAGTGATGACATGATAATTAA
Associated Phenotype:
Not determined