ZMP
zgc:63569
Ensembl ID:
ZFIN ID:
Description:
Choline transporter-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7SYC9]
Human Orthologue:
SLC44A2
Human Description:
solute carrier family 44, member 2 [Source:HGNC Symbol;Acc:17292]
Mouse Orthologue:
Slc44a2
Mouse Description:
solute carrier family 44, member 2 Gene [Source:MGI Symbol;Acc:MGI:1915932]
Alleles
There are 3 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa24830 | Essential Splice Site | Available for shipment | Available now |
| sa39508 | Nonsense | Mutation detected in F1 DNA | Not yet available |
Mutation Details
Allele Name:
sa24830
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000015507 | Essential Splice Site | 26 | 644 | 2 | 20 |
Genomic Location (Zv9):
Chromosome Zv9_NA203 (position 27668)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN149859.1 | 27668 |
| GRCz11 | KN149859.1 | 27668 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGAGCCGAGGAAATTCGACCCCAGCTTCAAAGGGCCCATCCAAAACAGG[T/C]AAGAGAAATTCCATGCAAATGTCAACCTTGCTTTGAAAGAAAGTTAAGCT
Long Flanking Sequence:
AGTTGCAGCAGAGGGATTTTATGGCTCAATGTTAAACTTTAGCAGCTTTACGGTACTCACAAACATTAAAAATAAAGGCCATGATTGAACAAAGGCTCCAAGTGGCGGTCTCCAATTTTTAACCAAGAATAGTCTTGTGCTGTAAACCTTGTGTCCACCATTCTCAATAACTGAAGTTGATATTAAATGAAACGGATGAATAGTTACTATAAATAAAGTATATGGTTGTTAGTCGGTTGCAATTTTTGTCAGTAAGCTTGTTTATATAGCTTCAGTTGGTGTGTGTGCACCGTTGTGTGCAATGTTTGTATGTTTATAACCACCTCTGAGGATAGTAGGGGCCGCGAGTATCTTGCATTGTTACTTTGGGGGTCGTGAGTTGAAAAGTTTGGGAACCTCTGATCTTAAAGATCCCTGGAGTTTTGATTGGTTTTTCCCTCGTTTTCACAGGAGAGCCGAGGAAATTCGACCCCAGCTTCAAAGGGCCCATCCAAAACAGG[T/C]AAGAGAAATTCCATGCAAATGTCAACCTTGCTTTGAAAGAAAGTTAAGCTTTCACCAAAATAGTGAAACCCTTGCTAAGTTTTTTTGTGTAGGTTTGTATTTTAAAGTACTCTAAAAATACTCAAATGTCAATATAAATGTTTTTAAACAATTATATTAGATTTATCAAAGTCAAACTAGTACCACAGCATATACTTTAACTATATATGCTGTAGATTAACATCCTGTAGATCAGAGGTGCCCAAATGTTTTCGTATGTAGGGCCAAAAACCAAATATCATTAAGAGCCGTGGGCCGATGGTAAATAAACCGAATTATACTGTGTATCCTTAAAGTTGCCATGGATAATTTCTTAACATTTTCTCATAATATTTCAAAATTATACAATTTAAAATTATTTTGTTCTATTTAACTAATTCAGTGTAACTTTTTAAATGATAACTTCTTGCAATAAAAACATAAACAATCACATTTATAACACCGTGCTGAGAAAAAAATCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa39508
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000015507 | Nonsense | 153 | 644 | 7 | 20 |
Genomic Location (Zv9):
Chromosome Zv9_NA203 (position 33179)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN149859.1 | 33179 |
| GRCz11 | KN149859.1 | 33179 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TATCATCTTCTTTTAAAGGCTGCTGCGCAAATTTTGAAAGAGAAGCTCTG[T/A]CCAGCATATCTGGTTTCCAGCAATCCATGTAAGACCGGTCTTCATATTAC
Long Flanking Sequence:
GCTATATGTTTGCAAAGCACTTGATTTGAGGTTTAAATCCAATCCTGCCTCCAATCTTCAGTGCTGAATTTACCCTCATGCTTCATCACTACATTCATCATTAGCCTGAGATCTCGTCACACCACTTGTATATGTAAATAGATTTGTGTGTGTCTCACTCAAAAAGGATGTGCGAATGTTGAGAACTGAGTTCGGATTGCATGTTTTTTTTTTATCCTTCCGCTTTTTCTGTTACAGTCAAGTTTGACAAACCAGTGCATGCGTTTTATTCTGTGTTCAGGTGTGTGTACAGACGTGTCCTAATCGTACTATGACTCTGATAACTGCCATCTCAAAACCACAAGACTGGGAGTATTACAAATCTTACTGCAAAGAAGACCCAGGCCATAAGGTATGGATATTTTTTTACTTATTTGCAAGTGTCAAATTTTTTTGCAGCTGACTAATCAATATCATCTTCTTTTAAAGGCTGCTGCGCAAATTTTGAAAGAGAAGCTCTG[T/A]CCAGCATATCTGGTTTCCAGCAATCCATGTAAGACCGGTCTTCATATTACTACACTTTTAGTATTTGTCTGATAAATAATGTTATTTCTCTGTCTTAGTTTTACAGCGGTGTTTTCCCTCTATGGGCAAAAAGGGTGAAGTCATTACTGTGGGTGATCAGGAGAAATTTAGTGATGGAGTGAATGAATTGGATGCTAAAGACCTGATGGCTGGAATGAAGTAAGCACCTTTTATACTGTTCAAGTATACATATGCAATATAATAACGCATCAGTGTGAGAACGCTGCAGTGCAGGCGGGCTGTTTATTAAAAATCTTTTGTTTTAACCATTTGAGGAACGCCTCGATAGTCATGGAGGGTCGTCAGGTTGCAATGAAGATCTTTGAGGATTACACAAAGTCTTGGTACTGGATCTTAATGTAAGTGAAATTATTTAATGGATAAAATATTGTTTTTTTTAGTCATTACTTTTGACATGCAGTCAATTATCATTAATATCG
Associated Phenotype:
Not determined