ZMP
LOC558743
Ensembl ID:
Human Orthologue:
SLITRK1
Human Description:
SLIT and NTRK-like family, member 1 [Source:HGNC Symbol;Acc:20297]
Mouse Orthologue:
Slitrk1
Mouse Description:
SLIT and NTRK-like family, member 1 Gene [Source:MGI Symbol;Acc:MGI:2679446]
Alleles
There are 4 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa44417 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa38206 | Nonsense | Available for shipment | Available now |
| sa30416 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa24774 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa44417
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112983 | Nonsense | 7 | 688 | 1 | 1 |
Genomic Location (Zv9):
Chromosome Zv9_NA675 (position 162959)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150474.1 | 162959 |
| GRCz11 | 1 | 4546246 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TGATGTCGGGGATGATTGTGTCGTATTAAAAATGCTGCTTTGGATTGTGT[T/A]GCTGAAGGCGGCTCTTTGTGTAGCTATCGGGAATGTTACAAGGGACGTCT
Long Flanking Sequence:
GCGGGCTGAAAAGTCCAGAATCTCTCAGGCAGCGTCTTTGTGATGCGAAAGCGTTGAACGAAGCCGTCGTGAAGGATGCTAAAGATGTAAGAGTCTCGGATTAATCTGAACGGCGATGCATTGAGATGTGCGCGGTGTGATTTCAGCACCACGGGAGAAAAGAACAGCTCCCGCGCCGTGGATATGTGAGAAATGCACAAGGTCAGTGATTTGCGAGCCCGAAAAGCCACATAATTGAGTTGAAGATGTCATTCTGTAGGCTTTGAGATTGTTTCGAGAGCATGCGATGATGGGGAGGTGATGGAAAAAAAAAAAGATGCTTCTTGCTGGCGATTTTTCTCAATCTGGACGTAGCGAGCTGAGCATGGATATAATCGCAGAGTGTCCTCTGCTTTTTTAGACTGGAGATTTATCTCGTTTCTCGCCCTCTTGCTGATTGTATTCATGTCTTGATGTCGGGGATGATTGTGTCGTATTAAAAATGCTGCTTTGGATTGTGT[T/A]GCTGAAGGCGGCTCTTTGTGTAGCTATCGGGAATGTTACAAGGGACGTCTGTAAGGAGCAGATCTGCTCCTGCAATGCAATAGAAGGCGATTTGCACATTGACTGTGAGAAAAGGAGCCTCACGAACCTGCATCATTTGACAGGTCCGAGCTCCCAGTTTTACCACCTCCTGCTTCATGGGAATTCTCTATCCAGACTGTTTCCCAATGAGTTTGCTAACTTTTACAATGCTGTGAGCTTGCATTTGGAGAACAATGGCTTGCACGACATCGTGCCAGGCGCTTTCTTGGGACTGCAGCTTGTGAAGCGGCTGCACATCAATAACAACAAGATCAGGTCTTTCAAAAAGAACACGTTTCTCGGTTTAGACGACCTGGAGTACCTTCAAGCTGACTTCAACCTTCTGAGGGACATCGACCCGTCTGTGTTCAGGGACTTGAGTAAGCTTGAAGTTTTAATCTTGAACGACAACCTTATTAGCGCTCTTCCCATCAACGTGT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa38206
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112983 | Nonsense | 159 | 688 | 1 | 1 |
Genomic Location (Zv9):
Chromosome Zv9_NA675 (position 162503)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150474.1 | 162503 |
| GRCz11 | 1 | 4546702 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGGGACATCGACCCGTCTGTGTTCAGGGACTTGAGTAAGCTTGAAGTTT[T/A]AATCTTGAACGACAACCTTATTAGCGCTCTTCCCATCAACGTGTTTCAGA
Long Flanking Sequence:
CGGGGATGATTGTGTCGTATTAAAAATGCTGCTTTGGATTGTGTTGCTGAAGGCGGCTCTTTGTGTAGCTATCGGGAATGTTACAAGGGACGTCTGTAAGGAGCAGATCTGCTCCTGCAATGCAATAGAAGGCGATTTGCACATTGACTGTGAGAAAAGGAGCCTCACGAACCTGCATCATTTGACAGGTCCGAGCTCCCAGTTTTACCACCTCCTGCTTCATGGGAATTCTCTATCCAGACTGTTTCCCAATGAGTTTGCTAACTTTTACAATGCTGTGAGCTTGCATTTGGAGAACAATGGCTTGCACGACATCGTGCCAGGCGCTTTCTTGGGACTGCAGCTTGTGAAGCGGCTGCACATCAATAACAACAAGATCAGGTCTTTCAAAAAGAACACGTTTCTCGGTTTAGACGACCTGGAGTACCTTCAAGCTGACTTCAACCTTCTGAGGGACATCGACCCGTCTGTGTTCAGGGACTTGAGTAAGCTTGAAGTTT[T/A]AATCTTGAACGACAACCTTATTAGCGCTCTTCCCATCAACGTGTTTCAGAACGTGCCCATCACGCACCTCGACCTGAGAGGGAACCGAATAAAAACGTTGCCTTACGAAGGGATTCTAGAGCAGATACCTGGCATCGTGGAGGTTTTACTGGAGGACAACCCATGGGATTGCAACTGCGATTTGGTTTCCCTAAAGGAATGGCTGGAGAACATCCCACAGAATGTGCTCATTGGACGGGTCATTTGCGAGGCACCCACTCGGCTACAAGGGAACGACCTGAACGAAACGGCCGAGATGGAGCTGTGCCCTTCAAAGAGTGGCATGGATTCCAGCCTGGTGGCGCCTCCCACCCAGGACGAAAGCCCTGATCGTGGCCCCCGTCCTACGCCCTTTAAAACTAGCGGGGTGACGGAGTCACATAGTGCTGGGGGAGGGCATAACAAGGGCCGTCCCAAAGCCAGAGAGAATTGGCAGCTGAAAACGAAGCCCACAGCAATGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa30416
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112983 | Nonsense | 388 | 688 | 1 | 1 |
Genomic Location (Zv9):
Chromosome Zv9_NA675 (position 161817)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150474.1 | 161817 |
| GRCz11 | 1 | 4547388 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CGCACGAGTTAAATCTGCGCGACAACAACATTCACACCGTGAGAAGGAAC[C/T]AGCTTAGAGGCTACCATAGTTTAAACTTGCTCGATTTGGGGGGGAATAAC
Long Flanking Sequence:
TTTCCCTAAAGGAATGGCTGGAGAACATCCCACAGAATGTGCTCATTGGACGGGTCATTTGCGAGGCACCCACTCGGCTACAAGGGAACGACCTGAACGAAACGGCCGAGATGGAGCTGTGCCCTTCAAAGAGTGGCATGGATTCCAGCCTGGTGGCGCCTCCCACCCAGGACGAAAGCCCTGATCGTGGCCCCCGTCCTACGCCCTTTAAAACTAGCGGGGTGACGGAGTCACATAGTGCTGGGGGAGGGCATAACAAGGGCCGTCCCAAAGCCAGAGAGAATTGGCAGCTGAAAACGAAGCCCACAGCAATGGCGGAGCCGCCTGCTAATTCATCCTGCCCCCAATCTTGTAGTTGTAGGCTGATAGGAACTAGGCAAGGGCTCGGGGTTAACTGCGAGGGCAGGAAGATAGAAAGTGTGGCTAATCTCAAACCCAAGCCACTAAGCGCGCACGAGTTAAATCTGCGCGACAACAACATTCACACCGTGAGAAGGAAC[C/T]AGCTTAGAGGCTACCATAGTTTAAACTTGCTCGATTTGGGGGGGAATAACATTAAAATGATCGAAAACGGCACTTTTCACAATCTCACCGAGTTGAGGTGGCTCTACATGGACAAGAACTACTTGGATACGCTAATGGCGGAGATGTTTGTTGGACTACAGAACCTGGAGTATCTCAGTTTGGAATACAATGACATCCAGCTCATAATGCCAGGCGCCTTCAGCCCGATGCCCAACCTGAGGGTGCTCTTTCTCAACAACAACCTGCTCAAAGCTCTACCCATGGATGCGTTCCTGGGGGTGTCTTTGTCTAAAATAAGCTTGCATAACAATTATTTCACATTTCTGCCCGTGCCGGGCGTCTTAGACCAGCTCAACTCTATCATCCAGATCGATTTGCATGGGAACCCCTGGGATTGCTCGTGCAACATTGTCCCGTTTAAGCAGTGGACAGACAAGCTCGGGGCGGACGTCATCGTGAGCGATCTCAAATGCGAGTCC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24774
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > A
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000112983 | Nonsense | 576 | 688 | 1 | 1 |
Genomic Location (Zv9):
Chromosome Zv9_NA675 (position 161251)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | KN150474.1 | 161251 |
| GRCz11 | 1 | 4547954 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
AAGAGGGATTTCCGCCGGATCAGGAATGATCTGATGTGCCCTCAGCTCTA[C/A]GACAAGATCTCCCCCACCTCTCTGTCCAAAAACAGCACTCTCCCTGCAGA
Long Flanking Sequence:
AACGGCACTTTTCACAATCTCACCGAGTTGAGGTGGCTCTACATGGACAAGAACTACTTGGATACGCTAATGGCGGAGATGTTTGTTGGACTACAGAACCTGGAGTATCTCAGTTTGGAATACAATGACATCCAGCTCATAATGCCAGGCGCCTTCAGCCCGATGCCCAACCTGAGGGTGCTCTTTCTCAACAACAACCTGCTCAAAGCTCTACCCATGGATGCGTTCCTGGGGGTGTCTTTGTCTAAAATAAGCTTGCATAACAATTATTTCACATTTCTGCCCGTGCCGGGCGTCTTAGACCAGCTCAACTCTATCATCCAGATCGATTTGCATGGGAACCCCTGGGATTGCTCGTGCAACATTGTCCCGTTTAAGCAGTGGACAGACAAGCTCGGGGCGGACGTCATCGTGAGCGATCTCAAATGCGAGTCCCCTGAGGAGTTCTGGAAGAGGGATTTCCGCCGGATCAGGAATGATCTGATGTGCCCTCAGCTCTA[C/A]GACAAGATCTCCCCCACCTCTCTGTCCAAAAACAGCACTCTCCCTGCAGACACCGGCACGCGGCCCAACTCCTACCTGGAGCCCAGCAGAGTCTCCATATCGGTGCTCGTGCCCGGCCTGCTCTTGGTTTTCGTGACGTCTGCCTTCACCGTGGTGGGAATGCTGGTCTTTATCCTGCGCAATCGAAAGAGATCGAAACGGAGAGATGGCAACTCTTCTGCATCAGAAATCAATTCTTTACAGACAGTTTGCGACTCGTCCTATTGGCACAGCGGAGCTTATCACGCAGACGCACCACACAGAGGTTACGACTGTGGTGCCCACTCTCTTTCTGACAAATGATGCTCGCGGAGAGCAAATGGACGTACTGCGTTTCGTATGTTGCGGTGACAATGGAGGGCGACACACTAGACACACTAGACCCCTGACTTGCCTCGATGGGGGGAAAAAATAGCCTATTTTTTGTTGCTTCGGTTGAGTATAGCGTCTATAAAACACTG
Associated Phenotype:
Not determined