ZMP
calcoco1
Ensembl ID:
ZFIN ID:
Description:
Calcium-binding and coiled-coil domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:A2BGD5]
Human Orthologue:
CALCOCO1
Human Description:
calcium binding and coiled-coil domain 1 [Source:HGNC Symbol;Acc:29306]
Mouse Orthologue:
Calcoco1
Mouse Description:
calcium binding and coiled coil domain 1 Gene [Source:MGI Symbol;Acc:MGI:1914738]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa24385 | Essential Splice Site | Available for shipment | Available now |
Mutation Details
Allele Name:
sa24385
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > C
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000103150 | Essential Splice Site | 427 | 640 | 9 | 15 |
The following transcripts of ENSDARG00000036695 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 36041755)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 23 | 35891408 |
| GRCz11 | 23 | 35990211 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CAGGGCCAACTGGGCACAGGAGAGAGAGACACTGCAGCAGAATGCTGAGG[T/C]ACATACAGTATAGTGAAAATGTATATTAAAAACAAAACCAAAAAAACAAC
Long Flanking Sequence:
CCTCATGTTTTGTGCATTTACAGTTCTTATAATTACTCCCGAAAATTTGGTATAAATTTGGCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGAAATATATGAAAAGATAGCTAAAATGGACGCCAGAACTGTAGTCTGATAAGGGCATGACGTTTTCATGTTTGTGTCATTGTTGAGCAGGCAGCCAATGAATTGGCTTTGAATGAACTCCGAAGTGTTCAGGAGCGTCTGAATGTTAGTGAACACTGTGTGGAGACTCTGAGGGGAGAGCTGAGAGACATGGTTGCTCAGAGAGACAGTGCACATGCTGAGCTCCATCAGGCCCGTCTGCAGGCCGCACAGCTCACACTTCAGTTAGCAGATGCCAGTCTGGCTCTGAGAGAAGGCAGGGCCAACTGGGCACAGGAGAGAGAGACACTGCAGCAGAATGCTGAGG[T/C]ACATACAGTATAGTGAAAATGTATATTAAAAACAAAACCAAAAAAACAACTTTAAGATTGTTTTTCATATAAGTGATTGCATAAATTTTCAGATTGACAAAGTGCGTCTGGAACGCCAAAATGATGAGATCCAGCAGAAGGAGGAGATGTTGCAGAAGGCAAGGATGGAGAGAGAGAAAGCAGTGGTGGAGCTGGGAAGAGAGAAAGATTGCAATCGGGTAAACAGAAAACTCTCTTCAGGGTTCCCAAGGGTCATGGAATTTTTGATTTTAAAAGGTCTATTCCAGACATTGAAAGTCAGGGAATTTTAAATATTTTTGTCCAGGCCCGGGAATATCAGAGACTTTTGTTTGTCGCTTAAAATTAGATTCCATTTATCAAAATGTCATTTTTCTGTACTTAATCTTGTTTTTTATTATGTTGTTTCACACGTTTTGCCTATTGTTGTTTTTTTCAGTGCCATTTTATTCCTTTCTGCTTGTTAACCAGCAGTCATCAAG
Associated Phenotype:
Not determined