ZMP
zgc:162431
Ensembl ID:
ZFIN ID:
Description:
hypothetical protein LOC100037381 [Source:RefSeq peptide;Acc:NP_001083002]
Human Orthologue:
CCDC50
Human Description:
coiled-coil domain containing 50 [Source:HGNC Symbol;Acc:18111]
Mouse Orthologue:
Ccdc50
Mouse Description:
coiled-coil domain containing 50 Gene [Source:MGI Symbol;Acc:MGI:1914751]
Alleles
There are 4 alleles of this gene:
Allele Name | Consequence | Status | Availability |
---|---|---|---|
sa24365 | Essential Splice Site | Available for shipment | Available now |
sa24364 | Nonsense | Available for shipment | Available now |
sa10456 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa24365
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
T > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000075973 | None | None | 360 | None | 11 |
ENSDART00000103480 | Essential Splice Site | None | 347 | None | 12 |
ENSDART00000122239 | Essential Splice Site | None | 345 | None | 13 |
ENSDART00000127192 | None | None | 243 | None | 9 |
ENSDART00000130287 | None | None | 720 | None | 12 |
ENSDART00000131209 | None | None | 135 | None | 6 |
The following transcripts of ENSDARG00000053857 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 30284052)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 30118942 |
GRCz11 | 23 | 30045473 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTGAAGATACAAAGCGCATTTGTAGAGAAGAAAAGAGCTCAGAGACCAGG[T/A]AAGAGGCTGTTTGTGTCGCTGTGAATTATGTTTTCGGTGTCTGACGTTTG
Long Flanking Sequence:
TGTTTCCCAGTGATGGGTTGCAGCTGGAAGGGCATACGCTGTGCAAAACCTATCCTGGATAAGTCCCCGGTTCATTCCGCGTGGACAAATCTGAAAAGAAATTTAATGAATTGTTTATGTATTTAATGAATAATTAAATGAAAAAATACAATAAATGAACATGTTTATGAACATAAGCAGCAAGTAATGTCTTTAATGTTTGGTATGATTGGGTGAGCCGGTGCGATGATGTCATGGGCGTGCTGGTGGAGGGAGGGAGCAGAAGTTTGTCCGCTCAGGCTTACCATCCCTGTGGAAGTTTCATGCCATTGTTTCGTTGTCTTTCTGGTCGGAAACTTTGAAACTACGTAATTATAGTTCGCGTTTGGTTCAGAGACACTGCCAAATTCAGCTATGAGCTTATGAGAAGTGAGGCTTTTTGGTCGAGTAGCCCTAGTATGCAACATGTAGTTGAAGATACAAAGCGCATTTGTAGAGAAGAAAAGAGCTCAGAGACCAGG[T/A]AAGAGGCTGTTTGTGTCGCTGTGAATTATGTTTTCGGTGTCTGACGTTTGTTGGATGAATCATCGTGGTTAAAAAAACACGTGAGGAATGTGGAAACTGATCTAACGTTAACCACACAGTCCTCATTCATTTCACTTCTGCTGGTTTGTTTTTGTCGAGTTGTAGTTTCGTTATGTGTAGTTACAGAGCCGCATGCTACCTCGTCATGTTTTGTCTTCATATAGTGTTTGTTCATGATTTGTGTAAATGCATTATTGCAAAAGGTTTCATTCTACGATTAAGTAGCATATATACGTGTTTGTTTTCCTTTATTTGCTTTACGTGTTTTGTACTTTACACGTGGCTCAATAGAATGGATTAACTTTTTATTTAAAAGAAACGCTGTAAATGTTATATCTTTAATTCTTATTCAACACCTTGTTCAGAATGTGTTTTTAATTCTTGTTAGTTTTATATCTGTTGTAAATAATAACATTTTAAGTAATAATAAATCATGTTAC
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa24364
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000075973 | Nonsense | 6 | 360 | 1 | 11 |
ENSDART00000103480 | None | None | 347 | None | 12 |
ENSDART00000122239 | Nonsense | 6 | 345 | 3 | 13 |
ENSDART00000127192 | Nonsense | 6 | 243 | 2 | 9 |
ENSDART00000130287 | None | None | 720 | None | 12 |
ENSDART00000131209 | Nonsense | 6 | 135 | 2 | 6 |
The following transcripts of ENSDARG00000053857 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 30277050)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 30111940 |
GRCz11 | 23 | 30038471 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
GAGTTCTTGTCATCCCCTATCCCCAGGCATAGAGTATGTTGGCTGCTGAA[C/T]AAAACAAACCAGCTACTGGGTCTGCAGAGCCTCCGGACGTCTCAAATGAG
Long Flanking Sequence:
TTTAGCTTTTAATAAAATCCATTTTTAATGTTTACAAAAACATTAAGTTCAATATTTTTGCCTCCTTAAGCAATTTATTTTTTAATTGTCTATAGAACAAACCATTATACACGTATTTGACTAATTACCCTATCTTGCCTAATTAACCTAATTAACCTAGATAAGCTTTTAAATTGCACTTTAAGCTAAATATTATGTTGAAAAATGTCGAGTAAAATATTGTGTACTGTCATCATGGCAAATATAAAAGGAGTCAGTTATTAGAAACTAGTTATTAAAACTTATGTTTAGAAATGTTGTGAAAAAAATCTTTCCATTAAACAGAAATTTGGGGAAAAATATACAGGGGGCTAATAATTCAGGAGGGCTGATAATTCTGACTTTCACTATATATATACAAAAATGACTTATAATTATATACACACACAAACACTGCAACTGTTGATATTAGAGTTCTTGTCATCCCCTATCCCCAGGCATAGAGTATGTTGGCTGCTGAA[C/T]AAAACAAACCAGCTACTGGGTCTGCAGAGCCTCCGGACGTCTCAAATGAGGACAAAGAAACTGACCATTACTGTATGTTCTTTCCTTATCTGTACACTTTCCTTCTGCCTCTCCAAAGTAAACAGCACAATCTCACTATCCTCCTGCACAGCTTAACATCTTTTTTTCTGCTGCTGGCACATCTGGAAAGCATTCCTCTTGAGTGCAGGCGTATGCATGTGTGAGTGCGTGTGTGTGCTCGGGTCAGTGTGGAAGTGTGAGGGCATTGTTGGGAGGTGCTTGTGTAACCTGATATGGGTTATCGCAACCTGCAGCAGGTGGGATCAAGCAGGAAATACATTTGTCTTGTTGAAACAGTGGCATTTATATTTGGAATACCCCGAAGAATGATTATTTCTCTCTGCTAGCACTTTTTGGGGGTGAGTAGTTTGCCCCTACCAGACGGAACGGTTAAGGCTCGCAGCTAAACATAGATTTCCACCAGCTGCTCAGGGTCAGGG
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa10456
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
---|---|---|---|---|---|
ENSDART00000075973 | None | None | 360 | None | 11 |
ENSDART00000103480 | None | None | 347 | None | 12 |
ENSDART00000122239 | None | None | 345 | None | 13 |
ENSDART00000127192 | None | None | 243 | None | 9 |
ENSDART00000130287 | Nonsense | 161 | 720 | 6 | 12 |
ENSDART00000131209 | None | None | 135 | None | 6 |
The following transcripts of ENSDARG00000053857 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 23 (position 30259439)
Other Location(s):
Assembly | Chromosome | Position |
---|---|---|
GRCz10 | 23 | 30094329 |
GRCz11 | 23 | 30020860 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
GTCCATACTCACCTCAGCCTGTTCAAACATCTCACAACCRGTCTCYGACA[C/T]GAAGATGTCAGCACTCCATTTCTCCCAACTATTCTGACTTTGAGGAGGAC
Long Flanking Sequence:
ACCTTGTTCTTCTTTTTAAAAGATATTTAAAGAATGCCTCTCTATTCAATGAAATCCATGTGTTATTATTGACCCTAACGCTTACCCTGGACAAACACAGGTGATGCATTCATCAAAATATGTAATTTTGATCTTTCAACAAAAGAAAAACAGGTTAGGAACAATATGAAAGTGAGTAAATGTTGACAGAAATGTAATTGTTGGTGAAATATCCCTGAAACCCAACTGTCCTACAAAAATTGTAGTATTATACTAACACAGTATAAATGTATTGAAGCTTCATTTAAATTCCATGTTTATGTTCATCAATCCATGCATGTTAAACCAGTTCAGAACTGTTTGTTAACTGTTTTACTCTGCATCCCCCTAATCTTTAACCATTTTCCCCAAATCCCCTGCTTTTTGTTTGCATGGTTGGCTTTACAATAGAATCCATAAGCGTTCCTGCTCGTCCATACTCACCTCAGCCTGTTCAAACATCTCACAACCAGTCTCCGACA[C/T]GAAGATGTCAGCACTCCATTTCTCCCAACTATTCTGACTTTGAGGAGGACCAGATTGAGTACAGCAGGCCTACTGCCATCAGGCAGGACAGAAAACCTGTTGTAGAACAAAGGAGGAGATCTTCCAGAGTTCATCTAGAGCAGGACGACAGGAGCGTGACTAGTCAAAACAGCAGCAGCAGATCTTTACAGCTGTCAGGGGGATGGGGTGATGTCGTTCAGCTCATAAAGAATGATATGAGTGAGCAAGGCTACCTCAGCTACAGCTCTGAGGATGATCTCTTTGAACCGGTCTATAGACTTGAAAAGATACTGCGAAAAAAGAAGCAGGTCTCGGAAACACGGTTAAATCGCAACAGCAGTGTCAAGGAGGATTGTAGGAGATTAAGGCAAGGAGACTGTTGTAGTCGTACGGAAAGTTTTAGCGAAAGACGTGTTCATTTCCTGGATGAACGAAGGCGTACTAACAGTTATCTAGAACCTACGAATGTCAGTTCTAGA
Associated Phenotype:
Not determined