ZMP

hmg20b

Ensembl ID:

ENSDARG00000042045

ZFIN ID:

ZDB-GENE-030131-4258

Description:

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-relate

Human Orthologue:

HMG20B

Human Description:

high-mobility group 20B [Source:HGNC Symbol;Acc:5002]

Mouse Orthologue:

Hmg20b

Mouse Description:

high mobility group 20 B Gene [Source:MGI Symbol;Acc:MGI:1341190]

Alleles

There are 4 alleles of this gene:

Allele Name	Consequence	Status	Availability
sa17207	Essential Splice Site	Available for shipment	Available now
sa24153	Nonsense	Available for shipment	Available now

Mutation Details

Allele Name:

sa17207

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

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Mutation:

A > C

Consequence:

Essential Splice Site

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061617	Essential Splice Site	None	301	2	9

Genomic Location (Zv9):

Chromosome 22 (position 20490345)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	20147038
GRCz11	22	20172016

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

TTGTTAGTCTTTTATATTTCATCTAAAYATATTTTCTTTTTTGYCTTCCC[A/C]GAATTCCGTGAATCCACGTTATGGGTGGTGTAAAGCAAGAGCAGACTGAT

Long Flanking Sequence:

TCGAATGTCATTCCTTTGCTGTAAATGCTTGTGCTCCTGTATTATTGTTTTTTTTTCCCCTGCAACCTTGATGTGCGTGCATCCTGAATGTTTACAAACCGGTAATTCGCCTATACAAAATCTAAAAGAGAAAATTTGAAAAAGTCGCTGCCCCCTATTGACGAGCACTCGCAACTACAGCTGTCACTCAAAAGTACCTTTACTACAAAATGCGTAATTGTATCGTTTTGAGAGCCAGGGAATCGCAATACGTTTTTAGTATCGATATATTATGCAACACTAATCATATATCTTAGCTTTGAAACCCAATTTTTGTTTTAAATAGGCTTTTTACCCTCCCATAAGTGCTGTTGTTGAAATGGCATTATGAAAACATAACGTTAACTATAATAATAACTGTGTTGTCATAATTTGTAGTTTAGTATGTACTTGTAGATAGAAATTGATTAATTGTTAGTCTTTTATATTTCATCTAAATATATTTTCTTTTTTGCCTTCCC[A/C]GAATTCCGTGAATCCACGTTATGGGTGGTGTAAAGCAAGAGCAGACTGATGCTCCTGCATCTAAAGACTCTCAGCAGACTGATTCGCCACAGGAAGAGGTTAGATACAGACTGCTTTAACATCATCAATAACACTGTCTATCACATGTCATGCATAACTGAATCATCATAAAAGGTTTTGTGGACAGGCGCACTCATATTTTCCCCCATACACTCCTCCTAAATTGAATTCATGTCAATTTGAATTGATTTGTTACAGAACCAATCGACTTCACAGCCGGTAAAGAAGCGAGGTTGGCCAAAAGGAAAGAAGAGAAAGAAGGTATTGCCGAACGGCCCCAAGGCTCCAGTTACCGGTTATGTCCGTTTCTTGAATGAGAGACGGGAACACATCCGGGCCCTTCATCCAGATCTTCCCTTTCCAGAAATCACCAAGAGACTCGGGGCAGAATGGAGCCGCCTGGCACCTCATGATAAACAGGTATTATTATGGTTATTAAG

Associated Phenotype:

Not determined

Mutation Details

Allele Name:

sa24153

Status:

Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.

Availability:

Order Allele From ZIRC

Mutation:

C > T

Consequence:

Nonsense

Transcripts:

Transcript ID	Consequence	Amino Acid Affected	Amino Acid Total	Exon Affected	Exon Total
ENSDART00000061617	Nonsense	233	301	7	9

Genomic Location (Zv9):

Chromosome 22 (position 20493727)

Other Location(s):

Assembly	Chromosome	Position
GRCz10	22	20150420
GRCz11	22	20175398

KASP Assay ID:

None (used for ordering genotyping assays)

KASP Sequence:

None

Flanking Sequence:

AGCGCCTGGAAGCTGAGCTAGGCCAAGATGAGCTTCGTACGCAGGCCCTA[C/T]AGCGCCACCTACAGGCTATCAAACAGACGCTAGTCAGCAGCTTGGCTACT

Long Flanking Sequence:

TCTTCTTTTTTATGTTGAACACAAGAGGAGATATTTTGAAGAATGTTGGAATCAGTACATCCATAGTAGGAAAAAATGTTATAAAACTCCAACATTCTTCTAAATATTTTAGTAAATGGAAACATTTTTTAAACAGTTGGAAACAGTTGATATATAAAAGACTTCCTGTATATTGACTCATGTGATGGATTTCCTTCAGAACTCAGACTTCACGGCCAGATTTGATGTCCCTATTTTCACAGAAGAATTTTTGGACCAAAACAAAGGTAAATTATACGGAGTTCTTGTGCTTAAAACTACACAAATGTCTATAGAAAAGCTATTTTCCTAAAATGACCTTTTTTCCAGCAAGAGAAGCAGAGCTCCGGCGTTTGCGCAAGGCTAATGTGGAGTTCGAGGAGCAGAATGCTGTTCTCCAGAAACACATTGCCGACATGTTCAGTGCTAAAGAGCGCCTGGAAGCTGAGCTAGGCCAAGATGAGCTTCGTACGCAGGCCCTA[C/T]AGCGCCACCTACAGGCTATCAAACAGACGCTAGTCAGCAGCTTGGCTACTGTGCCTTTACCAGGTCAGTACGATACAGTGCCTATAATACAAATACCGTAATTGATATTTAACAACTTTGTGCTTTATGTTGTTTATCAGTAGCGATAGCTTCGTGATCATTGGCCAAGTTGTAATAAGTGTCTTAAGTTGACAGAAAACTAGAAAGCAAAACATTGCAATATTGACAGATTTTTCTTCAATGTGTATACACCACAAAATTAAGATGCTGCATAGATGCAGAGATGTGGCCTTTTCAGTAACAAACTGCTCTCTGCACATCAGCATTTAAAGCTTGTTTGACAGCTGTGCGCTTGTTTTAAATTGTTGCAATTCTATAAAAAATGTCCTGGTAATAAAATAAATGGGTGTGCGAGAGATCTGCAGAGTAGATGGCAACATCAACAGCCTGAGGTATCAAGACATTTGTCCTGCCTTTTAAATTACAAACCACAGAAGAGG

Associated Phenotype:

Not determined