ZMP
ccdc76
Ensembl ID:
ZFIN ID:
Description:
tRNA guanosine-2'-O-methyltransferase TRM13 homolog [Source:RefSeq peptide;Acc:NP_001014331]
Human Orthologue:
CCDC76
Human Description:
coiled-coil domain containing 76 [Source:HGNC Symbol;Acc:25502]
Mouse Orthologue:
Ccdc76
Mouse Description:
coiled-coil domain containing 76 Gene [Source:MGI Symbol;Acc:MGI:1925219]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa24126 | Nonsense | Available for shipment | Available now |
| sa1529 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa24126
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062649 | Nonsense | 71 | 458 | 3 | 11 |
Genomic Location (Zv9):
Chromosome 22 (position 16530801)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 16289203 |
| GRCz11 | 22 | 16315473 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TAATTACTGTTTGTGTTTTGAACAGCACTGTATTTGAAGATAATTTGACT[A/T]AACACCTGAAGAAATGTAACTCCAAGGAGAAACCAAAACCTGTATGTATA
Long Flanking Sequence:
TCATGATAAACTGCTGTGAGTTTAACTGCAGGTCATGCACGTGTAAAGAAGATTGATTTGTCCATGGAGTCAGATTTTGATATAACTTTCCTTCTAGTCTTGTGGGTGGTCCACGTTGTTTGCACTATGCACTGGTCACCACTAACTGAATGGAGTTGGAGCACACAGTTTTGTTTTGGAAATAATTTGCATATGAAATTTATGTTTCAAAATCGCCCAAGTTTTAACCCGCCTATGCCATTTTTTACCCACACCATCAAACTCAAAACCGCCCAATCTGGCAACACTGATCATCAGACGTGTATAGTATAGTATAGTATAGTTTCAAAGGTTGTTTGAAGTTTATTTTTAAAAAAGACAAATGAAACTACATTTATGATAATCACTGCTAAATTGCTAAATAAAAGTTTATTTTTAGGAGGTCTATGTTTTTTACTATTAAAAATGGATTAATTACTGTTTGTGTTTTGAACAGCACTGTATTTGAAGATAATTTGACT[A/T]AACACCTGAAGAAATGTAACTCCAAGGAGAAACCAAAACCTGTATGTATAAGTAACACGTTGTGGCAGGATTTTTTTAAAATTATGTTTTCCTTTCAGCATTATAACAATATTAAGAGTCATGTGGTATAACACCATGCTTGTTGTGCTAATGACCTTTATTGTTTGTTCATACTAGATTTATTACGTAAAGGATATTAATGCTGGATGTGCAAGTGAAGATGAAACGGTTAAAGAGGTGATTTGACTTGTTTAAAGCTTATGCAAGAAACTTTCCTTGTTTAAAAAAAATTAATGTGTTTAATGATGATTCTTCAATGCAGATATCCATTGCTGATCGAACCAAAGAGGAACTGGATGACTTGATTGTGAAGCTCAAAAATGCATTGCAAGGTTTGCAGCTATCATTAAGTTTTTAGTCACATGATAATAATTCACGCATTATTAATGGGCTCTATGCACGGCGGCGCGTGACGCATTTCCGGTAAAATTTAAGACCCT
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa1529
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062649 | Essential Splice Site | 220 | 458 | 8 | 11 |
Genomic Location (Zv9):
Chromosome 22 (position 16527057)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 22 | 16287148 |
| GRCz11 | 22 | 16313418 |
KASP Assay ID:
554-1453.1 (used for ordering genotyping assays)
KASP Sequence:
AGAAAAATATTGCTCTTCCTGMTCCAAGTTGAAGTTTYATTTCTTATTAA[G/T]GTAGACGGAAAGCACAAAAATGCAGACTCCACTTTTGACCGGCTTCAAGT
Long Flanking Sequence:
TTCCAACGTAAATTAAATATTGAGTAGGGGGTGGGGCTTTCTTTTTGCGCATCATTATCTTGTAGCAGACTTACATTAAGAGGGGCATGGTTAAGAATAGAGGTAAGCAGGGTTTAGCAGATGGTAAATTAGCCTTACTTTCTGGAACACATCCCATAACTGTCACATTGTAGTAACCATGTATATACAGTTTTGGTTTATTCTCATTTTCAAGAAATATTCATAATACCTGGTTTTGCAGGCTTCTATCCTTGGAAACATGGAGGCTTTGGAACTGCTCAGCCCAAACAGATGCTACATAGAGTTTGGAGCTGGGAAAGGAAAACTGTCCCACTGGATTCACATCGCTCTTAAATCAGTGGAAAATGTCCATTTCTTACTTGTGGAAAGGTCCAGTACTCGCTTTAAGGTGTGGTTTCATTCACATGAAGCTTTCCTTTCTTCATATACAGAAAAATATTGCTCTTCCTGATCCAAGTTGAAGTTTTATTTCTTATTAA[G/T]GTAGACGGAAAGCACAAAAATGCAGACTCCACTTTTGACCGGCTTCAAGTGGATATTCAGCACCTAGATCTGCGTGAGTATGGTGTTAATATGTTATGATATTCTGTCTTGATCTTCATGAATAATATATTTCCTCTTTATTTTCCATTTCAGGCAAAGTTCCTCTCCTGAGAGAAAAAGGACTTCCCGTGATTGGTGTTGGGAAGCACCTCTGCGGTGCAGCAACTGGTAAAAAAGAAATTCAATAAACCTTATAGCTTGACTATGGTATCAGTACTGTACGACTGATCCAGTATCAACTTATTCCCACAGATCTGGCTCTTCTGTGTTTATTTGAGCACAACTGCACCAGCAAGGATGATGAACCTCCATTTAAGCGTGTAAAACTTAATCAGGCAGAGGGTGCTGGTGGTAAAGATATGAAGCCTGTTCCCTTAACTGAAGGCAGGGAAACAGGTGAAGAGATTGTAGTGTCAGGACTGGCCATTGCTTTGTGCTGC
Associated Phenotype:
Not determined