Busch Lab

ZMP

vcam1

Ensembl ID:
ENSDARG00000062479
ZFIN ID:
ZDB-GENE-070209-238
Description:
vascular cell adhesion protein 1 [Source:RefSeq peptide;Acc:NP_001077304]
Human Orthologue:
VCAM1
Human Description:
vascular cell adhesion molecule 1 [Source:HGNC Symbol;Acc:12663]
Mouse Orthologue:
Vcam1
Mouse Description:
vascular cell adhesion molecule 1 Gene [Source:MGI Symbol;Acc:MGI:98926]

Alleles

There are 5 alleles of this gene:

Allele Name Consequence Status Availability
sa31070 Nonsense Mutation detected in F1 DNA Not yet available
sa10702 Nonsense Available for shipment Available now
sa24124 Essential Splice Site Available for shipment Available now
sa9939 Essential Splice Site Available for shipment Available now
sa45764 Nonsense Mutation detected in F1 DNA Not yet available

Mutation Details

Allele Name:
sa31070
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090390 Nonsense 11 808 1 10
Genomic Location (Zv9):
Chromosome 22 (position 16394983)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16153605
GRCz11 22 16179875
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTCTTCATAAGTGTACAACATGGATACAGCTTTCTTGCTGACTTTGCTTT[T/A]GCCAGTTGCAGGTAAGTTTCATCTGTTAGTAATTTAACTGCATATGCTAT
Long Flanking Sequence:
CAAATGTTTTTTTTTTCTATATAGGCCTCATGTTATACACTTAAATTAATTCATATTTATACAATAGCCCCCTCCTCAATCCATCAAGCTACTTTCTTTTAGATCAAGCATTTCAGGGAAAACAAAATAATTTCCCCAAGCTTGTAAAAAAAAGCGTTGGAAGTTGTTTTAATGTGTCGCCACTCGCTAATTCATAAAGGAAATGTTATCTTCAGAGTGTACACAGTGATTTCCTGGAAACCCTGTCAGGACAGCAGAGGGAGCCTGTGGTGGATGGAGAACTTCTGCTCGCCTCTCTTCTTGGTCCAAACAAAGGATTGAGGGATGGGGAATTCCTTCATGGCTTATTTAGGGCTACTATCCCACCCCCTTCTCATATAAATGAGATCCAGAGCTGAATGAAAGCAAGATCACTAACTCATTTTCACTCCCTTGGAGCACTTGGAAAAATTCTTCATAAGTGTACAACATGGATACAGCTTTCTTGCTGACTTTGCTTT[T/A]GCCAGTTGCAGGTAAGTTTCATCTGTTAGTAATTTAACTGCATATGCTATTAGGCAACATGCATATCTTTACATATTTTACAGTCTTGCTTAACATTTCTTTTGGTCAGTTTCTTAGACTTTATATGGCTGATTTTATTAATGCAGTTATATTATTATTGGTATTGTTGTTGTTGTTATTATTATTATTTAAATGTTTACTTTTTTATTATGAAAAAAATTTGCTTTGTTGTATAATTTTTTAATATTTAACCTCTTGCTTGTATTTTCCACATGGAGAAAAATATTCTTAATATAATTATTAATATTGATTATGATTAGAAGTTATGATAACTGATTACATACAAATAATTGTATTTATTTATTTAATTTTTGCATAAATTGACATTATCGAAAATAACAGAAAATAATATTTAGAAAAAAAAGATTTTAATCCTTAGCCAACACATTACCTGTTTTAATTACAGATGAGTTGTTACATCAATATTCAGAATAGCCCTG
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa10702
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
T > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090390 Nonsense 116 808 3 10
Genomic Location (Zv9):
Chromosome 22 (position 16393074)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16151696
GRCz11 22 16177966
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
ATTTTGGAATCCATTTCAGCTTTTCCAAGAAACCCAGTTATATCCGGAYA[T/A]GATCACTTGATAATGGGCAAGGAAAACRTTTTGTCCTGTGAAGTGTCTTC
Long Flanking Sequence:
TTCTGTGTTTTCAGTTTAATCATTTGAGTCCGGATTTAGAATACACTTTTCTGTTGTGACTTTTTACCACAGTAAATATTTCTCAAACTATGTCTGGCATGACATTGGAGGTCAGACTGAGTATAGTGTTGGTTAACAAAAATGTATACAACTATATTTGATGGATTTAAAGGTTTTTTTTTTAAGTGAACGGTAAATATTGATTTGATGAACAGAACATTTGTCCAATTAAACTTTTAGTTCAAAAATTAATATTCACTATGATACCAAGCTGTCAACATTCAAGTGGATCAGTGAAAAAAATGCTAAGACAAAAATGTATTTTGTTATTAAAACAATTATTTTAGGAACTGTTTATGAAAAGTTTTGATCCACTCCAAATGTTGACGACTGTATCCCTGCTCAATGAAATACTTTGACTCTTCATTTGTGCTTTTGACTAATTTTTACATTTTGGAATCCATTTCAGCTTTTCCAAGAAACCCAGTTATATCCGGATA[T/A]GATCACTTGATAATGGGCAAGGAAAACATTTTGTCCTGTGAAGTGTCTTCTGTGTACCCGTCGGAGTACTTTGATGTGGAGTGGTTATATGAAAACAGGGTTGTTCATAGGGAGAGTGGAGACTTTGATAAAGATGCTGTTTCCATTCCTTACACATTTACACCTTCAAGTGAGGACGATGGAAAGGCAATAACTTGCAGAGCATCCCTCAATATTGAAGGTGTACCACCCGAAGAGAAGACCAAGGAGACGTCTAGACACATCAAAGTACTTTGTAAGCTAGACGTACATATTTAAACATAAACCACCTTTCAATTAAACCCAAAACGGATGTGGGAATAGTGTTTCCTCTCTGAAGATGGTGACCCCCATGGTTATTTATTTTTCCCATTGCTTTCACAGCTGCACCGCATAACGTTGAAGTATCTGGAGAGACCGCAGTCTCACTGGGATCCAGTTTAACTTTGACCTGTGAGGCTGAAGGCAATCCAAAGCCTGCT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa24124
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090390 Essential Splice Site 383 808 5 10
Genomic Location (Zv9):
Chromosome 22 (position 16392064)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16150686
GRCz11 22 16176956
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
TTTCAATGAGTATGGCAGTCAGAGGACCACTCTTAATCTAAATGTTGAGG[G/A]TAAGACATTGGTGGATTTTGTGGTACTAAATTTGGTCTGTTGAGCACAGT
Long Flanking Sequence:
ACGGCTCTTAAACCAGATGGCCATTCTGTGGAACTGGGAAAACAGCGAGATCTCTTCATGCATAATGTGTCCTTATCAGATGCTGGAACTTACCAGTGTAATGTTAGCAATGACTTGGGAAACCAGATGGTCAACGTTTCAGTGGTCGTTCAAGGTTAGAGGTGCACTTAATTCCCTAAATGTGTCTTAAATGTCATTGATCCTATATATTGTAATTTCTAATTTCTTTACAGCACCTCCTGTGGATACTCGCATTGTAGCAAGTCCACAGTCAAGTCTGAACGAAGGAGATTCTGTGACCATTTTCTGCAAGTCCAGTGGGGTTCCTGTGACACGTGTGGTCCTTAGTAATGTTGCAAAAACTATACTAAAAACCAAAGAAGGAGCTGAGACATCAGTTACCATTGACTCCGTCAAGCTATCCGACACGGGCATGTTTGTTTGCGAGGCTTTCAATGAGTATGGCAGTCAGAGGACCACTCTTAATCTAAATGTTGAGG[G/A]TAAGACATTGGTGGATTTTGTGGTACTAAATTTGGTCTGTTGAGCACAGTTAGACTGTAGTAATGGGTAAAATAAAATAAACTAATTGTAGGCCTATATCAATTCATTAATTCTTAAAGAGTAGGTCTTCAAAAATATCTTATTTGCAGCTTGTAACGTAGCTGCCCTTCAATGTAAACAGTCTGCAAAGTTGTTAATCAAAAGAATTCATGATAAACAAAGATGCTGTCTCTCAAAAAAAAAAAGAGTCAGCTCTGAGTCATCTAAATGAGCTGTTATTTATGTATGTATAATTTATTTATGTTATATATTATTATTATTATTCTTTTTTTTTATTTTTTGCCTGCTACCAGTCTATGTCAAGAGAATTTATTTAATATATTTACGTAATCCCTGCCTGCTTGTAAAATATTAACTTTCTGAACTGGGACCTGAATAGATAGGGAGAGACCAATCAAAATAGATTTGGCCAGCTGACCAATCAGAGAAGAGTTGGCTTA
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa9939
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Order Allele From ZIRC
Order Allele From EZRC
Mutation:
G > A
Consequence:
Essential Splice Site
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090390 Essential Splice Site 384 808 6 10
Genomic Location (Zv9):
Chromosome 22 (position 16391351)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16149973
GRCz11 22 16176243
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
TTTYGGAGGTGACACGGTACARCTCTTAACTTTCTTTTAATTGTCTTGCA[G/A]CTCATTTGCTGGAMGTGGAGCTRCAACCAAATGGCACGGTGGTGTCCGAC
Long Flanking Sequence:
ATAAACAAAGATGCTGTCTCTCAAAAAAAAAAAGAGTCAGCTCTGAGTCATCTAAATGAGCTGTTATTTATGTATGTATAATTTATTTATGTTATATATTATTATTATTATTCTTTTTTTTTATTTTTTGCCTGCTACCAGTCTATGTCAAGAGAATTTATTTAATATATTTACGTAATCCCTGCCTGCTTGTAAAATATTAACTTTCTGAACTGGGACCTGAATAGATAGGGAGAGACCAATCAAAATAGATTTGGCCAGCTGACCAATCAGAGAAGAGTTGGCTTACAAACCTTAAGCACAGAAAGAATTTAATCAAATGTAATATTATATGCAGATTCTGAATTACAATTTTTAATGATCTTAGACCCATTTGAACCTATAGAGGACTCGAACACTTTAATAGGGCACTAAAAAGCTCCTCAGAAAGTGAGAACGTTGTGATTATGTTTTTGGAGGTGACACGGTACAGCTCTTAACTTTCTTTTAATTGTCTTGCA[G/A]CTCATTTGCTGGAAGTGGAGCTACAACCAAATGGCACGGTGGTGTCCGACAGAGGCTCCAGTTTGGTGCTGTCTTGTCAGGCTTCAGGTTGCCCTCATCCCGAGTTCTCCTGGAAGAATCTTTCAAACATGTCAGTCCACAGGCAACCTAAAACTGATGGCTCTCTGTCCCAGCTGCTCTTTGATCCGGTGGAGGTGGAGGATGAGGGAACTTACGTCTGTGAGGTCACATGTGGCTCAATCAAGAAGTCCAAGCAGACGGAAGTGAAGGTGTTTTGTAAGTACCTCTACAAGTGTACTATTCAGTCTTAAGCTAAGAAGATCCTCAAGGGATATATTAAATAGTTCACTTGCTGAATGGTGAAGGTATAATGAAGTTTTCAAGGTCTCAACCATTCTAAATTTTGAATGAAATTTGCAATTTCCAGACTCAGGGGTGTCAGACGGGGGGTAAAAGAGTATGCCAACCTGAGTTCACCAAGTAGGACATGTTCCTAGATT
Associated Phenotype:
Not determined

Mutation Details

Allele Name:
sa45764
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
G > A
Consequence:
Nonsense
Transcripts:
Transcript ID Consequence Amino Acid Affected Amino Acid Total Exon Affected Exon Total
ENSDART00000090390 Nonsense 514 808 7 10
Genomic Location (Zv9):
Chromosome 22 (position 16389478)
Other Location(s):
Assembly Chromosome Position
GRCz10 22 16148100
GRCz11 22 16174370
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACCTGCACTGTTCAAGACGTATTCCCTGTCAACCTTTTCCAAATTCTGTG[G/A]CTGGATGGAGAAAGAGAAATCTGGAGAGAGGAATCTCAGTCATTTTCAAG
Long Flanking Sequence:
TAACCAACTGTTAAACGAGTCACCAGTAATTCAGTCTCTTTGTGGGAAGTTTTAATAATAGCTCACCATGACATTGATTTGATAGACTACGGATGTAAAGTAGTTCATCCTGTCAAGATGTAATGCTTCTCTGTTAAATGTTATTGCTTACAAGGTCACAGAGACTTCCCCAAAATCTTCTGTTGCTCACTGAGGATTTTAACTCTTAGAATGTGCGAGGGAGTGTTGCTTTGTTTATATTATGTGCTGTCCTGCATATTGACTCTGTCAGAATGACGATGATCTGCCCTAATTTGAGGATCTTCTTATCTCAAATGTATTTATTACTTCTGGTTTTTATTTATACTTGAAAGTGCTTAGATATTGCGTTTTCTTCTCTTATCAGCATTTGCAACATGTCCTATCGTAAAAAGTTCTGGACCTTCCCTGGCAGGAGAGAGGATGAAATTGACCTGCACTGTTCAAGACGTATTCCCTGTCAACCTTTTCCAAATTCTGTG[G/A]CTGGATGGAGAAAGAGAAATCTGGAGAGAGGAATCTCAGTCATTTTCAAGTGGATCAACAGATCTGACTTCGGTTTATTCTTTACAAGTAGACGCCGAAGACCAGGACAGACATATCACCTGCAAGGTCTTGCTGGACATGCATGGTGTGCCACCTTCACAAGTAGTGAAGACTGCATTTACTACATTGTCCATTCACTGTAAGTCAGTGTTATTTTTTAAATCCTCTTAATTTTGGCTTTGATCTGTATTTTTGTGACATTTCGCTCCTTTTACAGATCCCCCTAGAGCCACAAGGATTATTGCAAGCCCACTGACAAAGTTAAAGGAGGGAGAACCTGTGAGCTTTTCTTGCCTTTCTGACAGCTTTCCTGCAGGGCGTATGGTGCTAAGCAGGGTTGTGGATGGCATACGAACAGAGCTAAAGACCATTGATGGGGTTGAAACTTTATTTACCCTACCTTCGGTTACGCTGGATGATGCTGGCATCTACGTTTGTGA
Associated Phenotype:
Not determined