ZMP
si:dkey-23n7.9
Ensembl ID:
ZFIN ID:
Description:
Si:dkey-23n7.9 protein [Source:UniProtKB/TrEMBL;Acc:Q5BJ12]
Human Orthologue:
PHF21A
Human Description:
PHD finger protein 21A [Source:HGNC Symbol;Acc:24156]
Mouse Orthologue:
Phf21a
Mouse Description:
PHD finger protein 21A Gene [Source:MGI Symbol;Acc:MGI:2384756]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa2379 | Essential Splice Site | F2 line generated | Not yet available |
Mutation Details
Allele Name:
sa2379
Status:
F2 line generated
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
A > T
Consequence:
Essential Splice Site
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000037361 | Essential Splice Site | 364 | 607 | 11 | 15 |
| ENSDART00000142859 | None | None | 142 | None | 7 |
The following transcripts of ENSDARG00000006878 do not overlap with this mutation:
Genomic Location (Zv9):
Chromosome 7 (position 40227851)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 7 | 38564491 |
| GRCz11 | 7 | 38835749 |
KASP Assay ID:
554-3206.1 (used for ordering genotyping assays)
KASP Sequence:
TTCAAACTGATTGAAGAAATCGGATGGAATGAACCATGCGTGTGTTTTTC[A/T]GAGGAAGAAGAGCTCTGTGTCTTATCTGAGTTCCATAAACCAGTCCAGCA
Long Flanking Sequence:
CCACTGTCCTTAGAAACGCCATCATCACCCGCCTCCACCAACACACACACTCCTTCCTCCAAACACCAGGACAGCCCTCTGGTAAAAGAGATTCATATTCGCACAACTGTTTATAATAGCGATAACGATGGTGTAGATTATGATGATTACTGAGATAATGGCATGCATTCTTTCCACAGAAAATGGCCTTCATGTTGTCTCTGGGACTGGTCACACGCGACTATTTAGAAGGTCAGGAAAATGAAATGTGTCTCTCCGTGTGTGTGTGTGTGTTTGTTTGTTTGTTCATTGCATGAGCATTTATTGACCTTTCCCTGTTTGTTTGTGTAGAGATTCAGAGCAGGCGTCAGGAGCGTAAGAGACGAACAACAGCAAATCCAATATATAGTGGAGCCATGTTTGAACCAGAGGTAACAAACATACACTAAATGATTAATCGATTCAGTTCAGTTCAAACTGATTGAAGAAATCGGATGGAATGAACCATGCGTGTGTTTTTC[A/T]GAGGAAGAAGAGCTCTGTGTCTTATCTGAGTTCCATAAACCAGTCCAGCAGGAAGAGAGGTAAGCTCAGCCGAATGCACTGCTGGATATTTTTGCTTGCAAATATCCAACATCACAGGTTGTTTGAGGTGTTTGCTGAGGCGAGCATCAGTATTGCTTTTGCTTGTTCTTTGGGGATTTAACTTCCTCCACCATTTGTGCTGCTCACTATAAAGATGCAATCTAAAGACTGATGTTTTATTCTGTACTTGGCATGCTTCTAAGTAGGCTTCTGCCGGTATCAAATGTACCTGTTGTGATTTAATTGCTAAAAAATAACCACTTTTGATTATTATTAGGCATTCATTAAGAAATTAACATGACCTAAGATTAACAAAAGCTGTTACAGCTGTCATTACACTGACTTCAGTTAAATCAGCTGACTTTAAACTGAACCTTAATGAGTTAATGAACTAAATGCCTATAAACGATCACTGAATAAAATGTGGAAATGTTCATTTT
Associated Phenotype:
Not determined