ZMP
trim54
Ensembl ID:
ZFIN ID:
Description:
tripartite motif-containing protein 54 [Source:RefSeq peptide;Acc:NP_001038490]
Human Orthologue:
TRIM54
Human Description:
tripartite motif-containing 54 [Source:HGNC Symbol;Acc:16008]
Mouse Orthologue:
Trim54
Mouse Description:
tripartite motif-containing 54 Gene [Source:MGI Symbol;Acc:MGI:1889623]
Alleles
There is 1 allele of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa23777 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa23777
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000049430 | Nonsense | 210 | 433 | 5 | 9 |
| ENSDART00000061394 | Nonsense | 210 | 433 | 5 | 8 |
| ENSDART00000140275 | Nonsense | 57 | 122 | 3 | 3 |
Genomic Location (Zv9):
Chromosome 20 (position 38768459)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 38840871 |
| GRCz11 | 20 | 38743750 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ACAACTTAGATACAGTATCTGGTCATCTTTTGCAGGACAATGGTCGGCGG[C/T]AGATACAGCACATATCTGACAAGTTTGATGAACTTTACGCCATTCTAGAA
Long Flanking Sequence:
CAGGTAGTGTAAATTTGCACTAGTCTGAGCCAGCATGATACACGATAGCCAAATGGCTCAAACATCAAAATTGGTCAGTGTCTTAAAAAACGATGTTTTTTAAATTTAATTTTTTGCATGTAGTGTCATAATGGAAAACTCTTTTTGACAATAATTCGTTTTACAACCCTTTCTTAAATTAGACAGATGATTGTTACCATTTTTTAATTCATTCATCCGATCTAAGTGCCTGGCAGGAGCAATTTTAGCTTTGATTAGCATAAATTATTGAATAAGATTAGACCATTAGCATCTCTTTTGAAAATGACCAAAGAGTTAATGTCAAAGAGATAAATTTCCTATTTGACGTTTGATTCCTCTGGCTCTTCTATATATGCTACGGTATATTGTCCAGTTTGAGCCAGTGATGATTAAAAACTTTTAAAGTTAATGCTATCAGTGCTTTTAATAACAACTTAGATACAGTATCTGGTCATCTTTTGCAGGACAATGGTCGGCGG[C/T]AGATACAGCACATATCTGACAAGTTTGATGAACTTTACGCCATTCTAGAAGAGCGTAAAAGAGAACTAATCGAGACTGTTGGTTGTGAGCAAGACCGAAAACTGGGTCATGTTCGATCACTAATTCGTCGCCACGGAGATCACTTAGAGATGTCTGTCAAACTGGTGGAGACAGCCATTCAGTCCATGGAGGAGCCTCAGATGGCTGTATTCCTGCAGGTATAACAAGCACCTTCATCACAATAAATTTTTCACCTCAGTATTTAGCTTTTCTGAAAAACATGTCGTGGTGGTGCCATGATAGGTTCTTGAGTGTTATTATGATGTCACTATAAAAATTCTAGTCATGATATATGCTTTGGGCGTCGCGGTGGTGCAGTGGGTAGCACGGTCCCCTCACAGCAAGAAGGTCGCTGGTTTGAGCCTCGGCTGGGTCAGTTGGCATTTCTCTGTGGAGTTTGCATGTTCTCCCCATGTTTGCGTGGTTTTCCTGTGGGTGCT
Associated Phenotype:
Not determined