ZMP
c6orf115
Ensembl ID:
ZFIN ID:
Description:
UPF0727 protein C6orf115 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q6TGV7]
Human Orthologue:
C6orf115
Human Description:
chromosome 6 open reading frame 115 [Source:HGNC Symbol;Acc:21230]
Mouse Orthologue:
3110003A17Rik
Mouse Description:
RIKEN cDNA 3110003A17 gene Gene [Source:MGI Symbol;Acc:MGI:1920362]
Alleles
There are 2 alleles of this gene:
| Allele Name | Consequence | Status | Availability |
|---|---|---|---|
| sa29420 | Nonsense | Mutation detected in F1 DNA | Not yet available |
| sa23770 | Nonsense | Available for shipment | Available now |
Mutation Details
Allele Name:
sa29420
Status:
Mutation detected in F1 DNA
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Not yet available
Mutation:
C > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062931 | Nonsense | 16 | 81 | 2 | 3 |
| ENSDART00000147466 | Nonsense | 16 | 81 | 1 | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 36839464)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 36911977 |
| GRCz11 | 20 | 36814856 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
CCAACATGAATGTGGAACATGAAGTCAGTCTGCTCATTGATGAAATCCGC[C/T]GACTGGGCAGTAAAAGTAAGTCTTGTACTTTTTGTGAACAACATCATTGT
Long Flanking Sequence:
CATAATAATCAAGTAACCTTGCTGCCTTTTCAATAATACTACGCCAGACTCTGAGATAAAAATGGGGAAAAAACTATTCTAGAATTGTAGGTGCACGAATGTCAGTTGTCAGTCGACACACAAGTGCATTGTGGTTTTTGGCTCGCATATTCACTCAGATTGGTGCTGCTCACTTTGGAGATTAGCAGCTGGCTTAATAGTGTGCTTTTAAAAGTACATTAAAAAGTGCATTATATTCCAATTTCACAGTAGAAATTGTACACTTGTGTGCTACTTTTAGCATTTTAATGCCTGAAAACAAGTTTTCATTTGACTAATGAACCAATAATAAACTATCCTAAAGTTTTTCATTTACCAGTTTGTGAGTCAATCAGTATAGACTTCAGTCAGTATAGACTGATTGAAAAATAAGACATTTACAGTAATAATATGAATGTATACTTCCAGAGACCAACATGAATGTGGAACATGAAGTCAGTCTGCTCATTGATGAAATCCGC[C/T]GACTGGGCAGTAAAAGTAAGTCTTGTACTTTTTGTGAACAACATCATTGTTAGGAATGAAATACTTTTATTTGTCTTTTTTTCTAGTATAAATTATATTAATTAACAGTTTAAGTAAAACATTCACTTGAAAATCTTGATGAATTTTAAAATTACCTAGTATGTATGTCTTGTAGTACCAATTGACTAAATATTTGATTGGAATGTGCCAAACCATTGCTTAACCACATGCTTAATGTCACCAAATTGCCAATGAGAAAATTAAGATTATGGAAGTAAAATTATTATTTATTTTCTTCATAGAATTTTCTTTTCACAAACTTTATTTGGGAAAAAATCTGAAAAAGGTGACGCACTCTAAGCACCTTGTTGGTTTGGTGGCGCAGATATAATTCTTTCATTCATTTTTCTTCGGCTTAGTCTCTTGAATGAACCACTAACTTATCCAGCATATGTTTTACACAGCCAACGCCCTTCCAGCTGCAACCCAAAACTGGGAAA
Associated Phenotype:
Not determined
Mutation Details
Allele Name:
sa23770
Status:
Available for shipment
For more information about the meaning of this status and other statuses, please see our FAQs.
For more information about the meaning of this status and other statuses, please see our FAQs.
Availability:
Mutation:
A > T
Consequence:
Nonsense
Transcripts:
| Transcript ID | Consequence | Amino Acid Affected | Amino Acid Total | Exon Affected | Exon Total |
|---|---|---|---|---|---|
| ENSDART00000062931 | Nonsense | 25 | 81 | 3 | 3 |
| ENSDART00000147466 | Nonsense | 25 | 81 | 2 | 2 |
Genomic Location (Zv9):
Chromosome 20 (position 36841038)
Other Location(s):
| Assembly | Chromosome | Position |
|---|---|---|
| GRCz10 | 20 | 36913551 |
| GRCz11 | 20 | 36816430 |
KASP Assay ID:
None (used for ordering genotyping assays)
KASP Sequence:
None
Flanking Sequence:
ATTTACAGTGATCCCTGACCCATTCTCTCTATCTTGCAGATGCAGACGGG[A/T]AGACCAGCGTCAAATTCGGAGTCTTGTTTAACGATGACCAGTGCGCCAAT
Long Flanking Sequence:
TAATCCATTCAACCTCTGGGTACAAGCACTACTAGCTTAGCTTAGCATACATCATTGAATCAGATTAGACCATTAGCATCTCAGTCAAAAATGACCGGAGAGGTTCGATAATCTTCCTATTTAAAGCTTGACACGTCTGTAGATACATCTTAAGACCGACAGAAAATGAAAAGTTGATATTTTCTTGGCCAATAAGACAAATATGCTCTTATTCTGGCATAATAATCAAATAACCTTGCTGCCATATCAATAATACTACACCAGAGATAATAATGGTGAAAAAAACATTAGGTGCACATATGTCAGTCGATACACAAGTGCATTGTGGTTTTTGGCTCGCATATTCACTCAGATTCATCCTGCTCATTTTTGAGAGTAGCAACTGCCTCAACAGTGTGCTTAAAAAGTGCTTGAATGTTAATAGGAGACATTCAGGGTTGTTAATAAATGATTTACAGTGATCCCTGACCCATTCTCTCTATCTTGCAGATGCAGACGGG[A/T]AGACCAGCGTCAAATTCGGAGTCTTGTTTAACGATGACCAGTGCGCCAATCTCTTTGAAGCTCTTGTCGGAACACTGAAAGCGGCCAAGCGGAAGAAGGTGATCACTTTCGATGGCGAGCTGCTACTGCAAGGAGTTCACGACAACGTTGATGTCGTATTACTGCAGGACTGAATGTGACCGTGTCTTTTCTAAAGCCAAGCCGAAAAAAGTACAAATGCATTTTTTTTACATGCCATTGCTACATTTTGATACATCTAAGAATGTAACAAGTTTGTGTAATGCATTGGAGTATTTTTATACAACCATTTCTTCCTTTCTCAGGGGAGTGATTCGCACAACAGTTTTTTGTAAAGTAGCAATCTTCCCTTTTCAAACACCTCAGTGGTTATATCATTAATATAAAACATAAAAATATACTATTAAAATGTGCATGAGCATGTCGCAGGCTTTCTGGGACACACTGTTTTCAACTTTAAAATGAATATCCATCAGAATATA
Associated Phenotype:
Not determined